prot_Ecto-sp13_S_contig834.19700.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig834.19700.1
Unique Nameprot_Ecto-sp13_S_contig834.19700.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length387
Homology
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: D8LB66_ECTSI (Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_ECTSI)

HSP 1 Score: 556 bits (1432), Expect = 8.570e-196
Identity = 328/385 (85.19%), Postives = 333/385 (86.49%), Query Frame = 0
Query:    1 QETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMAARVHGGERRLRWYSPPVQKISKRRRGEEGDAIGGRDLRKVESGTGDRGRXXXXXXXXXGSIVLPMERPAPXXXXXXXXXXXHGGLGGGVNGQHVIWAAGAXXXXXXXXXXXXXXXXXXTVGDHGGISGKQGGFAGDADVVVVGVKSGGGGRGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGESTAGKDGSSGTTAXXXXXXXXXXSSNGRPDAEAIARAAGG 385
            Q TTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALS  PPAVACAVIRMAARVHGG+RRLRWYSPPVQKISKRRR EEGDAIGGRDL KVESG GDRGR     XXXX            XXXXXXXXXXXHGGL   VNGQHV+        XXXXXXXXXXXXXXXTVGDHGGISG QGGFAG ADV+VVGVKS  GGRGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGESTAGKDGSS  TA          SS+GRP+ EAIAR AGG
Sbjct:   52 QGTTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESGMGDRGRGGGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGLXXXVNGQHVV-------TXXXXXXXXXXXXXXXTVGDHGGISGNQGGFAGGADVLVVGVKSSDGGRGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGESTAGKDGSSEITAKGGGGGDSAKSSDGRPEEEAIAREAGG 429          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: A0A835YQW0_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW0_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.470e-49
Identity = 94/168 (55.95%), Postives = 111/168 (66.07%), Query Frame = 0
Query:    1 QETTGTAVLLFHRFLIQERVGKHRRSRD-VILTTCLFLAGKVTEAPRRLRDVINVLHMLNST---GQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMAARVHGGERRLRWYS 164
            QETT TA++LFHRF   E     +R R  V+L TCLFLAGKV E PRRLRDVIN LH+  +    G  EPP LD+AYW MKE++VE EQ +LR I F +D   PYRLLLNYARSLRL R   + AWG  ND LF P AL  +PP +ACA I +AAR+      L W +
Sbjct:   56 QETTSTAIILFHRFCESEAQALRQRDRRLVVLVTCLFLAGKVRETPRRLRDVINCLHVTAAEPGGGAVEPPRLDQAYWDMKEQVVECEQAVLRIIGFDMDGEHPYRLLLNYARSLRLSRELVQLAWGFVNDFLFIPSALELSPPTLACAAISLAARLTDELNDLNWIT 223          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: W7TSF1_9STRA (Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 4.070e-23
Identity = 77/216 (35.65%), Postives = 101/216 (46.76%), Query Frame = 0
Query:    1 QETTGTAVLLFHRFLIQERVGKHRRSR--DVILTTCLFLAGKVTEAPRRLRDVINVLHMLN------------------STGQDEPPL----------------------------------LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPP-AVACAVIRMAARV---HGGER 158
            QET  TA L+FHRF     + ++ R+R  DV+LTTCLFLA KV E PRR+RD IN ++++                   S G D   L                                  LD+ YW +KE +V+ EQ++LR + F ++    YRLLLNYARSLR        AW L ND LF P      P  A A A + +A R+    GG+R
Sbjct:   53 QETIATAALIFHRFFAVRSLREYARNRRLDVVLTTCLFLASKVEEQPRRIRDAINCVYVVRKQLLAQAQGTRFVDTCAPSEGGDAETLSERGWVHGNGNGGAPGELKGNTDLARSVKGNILSLDRGYWDLKESVVDTEQLVLRILGFDLETFMSYRLLLNYARSLRARPVLVEVAWALLNDSLFSPACCLALPSHAQAVAALDLAQRLLTAAGGDR 268          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: A0A1V9YAW3_9STRA (Cyclin-related protein FAM58A-like isoform 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.120e-21
Identity = 61/156 (39.10%), Postives = 90/156 (57.69%), Query Frame = 0
Query:    4 TGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMAARV---HGG 156
            T TA+LL HRF  Q+           I  +C+FLA K+TE PR+LRD++NV + + +   + P  +   Y  MKER+++ EQ +LR + F++D   PY  LLNYA+ LR  RA  + A  L +D  + PR+LS   P +A A + +A  +   HGG
Sbjct:   30 TTTAMLLSHRFYAQK--SPQTFPFMDIGASCIFLATKLTEKPRKLRDIMNVAYSI-AHKTNSPVPVGSVYTAMKERLLDAEQNILRVLRFELDMDLPYMYLLNYAKFLRCSRATVQVALTLTSDFFYAPRSLSYDAPIIAAACLYVALSLVGEHGG 182          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: A0A7S1CMQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMQ2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.210e-20
Identity = 60/130 (46.15%), Postives = 73/130 (56.15%), Query Frame = 0
Query:    1 QETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPL-LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVL 129
            Q T   AV   HRF I     KH     V+ T CLFLA KV E PRRLRDV+N    +  +  D PPL LDKAYW +KE +V  EQ++LR + F      P R +LN +R+L LD    + A  LAND L
Sbjct:   62 QNTVAAAVQFCHRFFIVNSFRKH--DPYVVSTACLFLACKVEETPRRLRDVLNCAWAVRYS--DAPPLALDKAYWHLKEVMVSTEQLVLRALAFATRVEAPSRWILNLSRALDLDNGVVQVALALANDAL 187          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: A0A7S0PZF2_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZF2_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 1.990e-19
Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 0
Query:    1 QETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMAARVHGGERRLRWYSPPVQ 168
            Q T  TA++ +HRF   +    +   R  I TTCLFLA KV E P++L+DV+   + + +  +  P    + +  +KERI+  E+VLL+T+ F +    PYR LL Y +S++  R   + AW   ND L     L  AP  V+ A + +AAR         +  PP Q
Sbjct:   74 QLTIATAIVFYHRFFAHKSYEGY--DRFTIATTCLFLASKVEETPKKLKDVVTETYKIQNAPKAAPEPESQDFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSIQGTRDLAQVAWNFINDSLRTTICLQYAPRCVSAAAVALAARYLSDRHGTLYVLPPHQ 239          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: A0A485KT39_9STRA (Aste57867_11459 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KT39_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.890e-19
Identity = 62/168 (36.90%), Postives = 91/168 (54.17%), Query Frame = 0
Query:    8 VLLFHRFLIQERVGKHR------RSRDV-----ILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMAARVHGGER-RLRWY 163
            ++L HRF  ++R           RS D+     I   C+FLA K+TE PR+LRDV+NV + + S   + P      Y T+KE +++ EQ +LR I F +D P PY+ LLNY + L   R   + A  L +D+ + PRAL  AP  +A A I +A  +  G+    RW+
Sbjct:    1 MVLAHRFYAKKRYDSSTVASTTARSLDMFPHVEIGGACIFLATKITEKPRKLRDVMNVAYCV-SRNTNTPVPTGPEYTTLKESLLDAEQSVLRVIRFDMDIPLPYQYLLNYTKVLESPRLVVQIALTLTSDLFYSPRALLYAPHVIAAACIYLAIELLDGDHIASRWW 167          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: A0A7S0J0B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J0B8_9EUKA)

HSP 1 Score: 96.3 bits (238), Expect = 1.890e-18
Identity = 56/152 (36.84%), Postives = 82/152 (53.95%), Query Frame = 0
Query:    1 QETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMAAR 152
            Q T  TA++ +HRF   +        R  I TTCLFLA KV E P++L+DV+     + +T +  P    + +  +KERI+  E+VLL+T+ F +    PYR LL Y +S++  R   + AW   ND L     L  AP  V+ A + +AAR
Sbjct:   76 QLTIATAIVFYHRFFAHKSYESF--CRFTIATTCLFLASKVEETPKKLKDVVIETFKIQNTPKPPPEPDSQEFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSIQGTRDLAQVAWNFINDSLRTTICLQYAPRCVSAAAVSLAAR 225          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: T0SBG4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SBG4_SAPDV)

HSP 1 Score: 92.8 bits (229), Expect = 2.590e-18
Identity = 55/147 (37.41%), Postives = 87/147 (59.18%), Query Frame = 0
Query:    4 TGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMA 150
            T TA++L HRF   +           I  +C+FL+ K++E PR+LRD++NV + + +   + P      Y +MKER+++ EQ +LR + F +D   PY+ LLNYAR LR+ +A  + A  LA+D+ + P +L+   P VA A I +A
Sbjct:   28 TTTAMMLCHRFYASKSPATFPFMD--IGASCIFLSTKLSEKPRKLRDIMNVAYSI-AHKTNSPVPTGSEYTSMKERLLDGEQNVLRVLRFDLDMDLPYKYLLNYARFLRVSKATVQVALTLASDLFYAPSSLTYDAPIVAVACIYIA 171          
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Match: A0A0G4IYJ5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYJ5_PLABS)

HSP 1 Score: 93.6 bits (231), Expect = 2.910e-18
Identity = 56/151 (37.09%), Postives = 78/151 (51.66%), Query Frame = 0
Query:    1 QETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPL-LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMA 150
            Q T  TA  +FHRF  +E +  H      I  TCLF+AGK  E PRRLRDVIN ++   +   D PPL +   +W MKE ++E E+++LR I F VD   P+   +++ R LR           + ND    P  L   P  +AC  + +A
Sbjct:   29 QMTIATAQTIFHRFFAKEPLADHDPMD--IAQTCLFVAGKSQETPRRLRDVINTVYRYRNP--DLPPLEVADPFWQMKEHLIESERLVLRVIAFDVDVVPPHAYAVHFLRDLRASNDLANCTLSILNDSCRIPLCLHYEPHVIACGAMYLA 175          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig834.19700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB66_ECTSI8.570e-19685.19Cyclin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_... [more]
A0A835YQW0_9STRA3.470e-4955.95Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
W7TSF1_9STRA4.070e-2335.65Cyclin-l1 n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A1V9YAW3_9STRA7.120e-2139.10Cyclin-related protein FAM58A-like isoform 1 n=1 T... [more]
A0A7S1CMQ2_9STRA1.210e-2046.15Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0PZF2_9EUKA1.990e-1934.52Hypothetical protein n=2 Tax=Coccolithus braarudii... [more]
A0A485KT39_9STRA3.890e-1936.90Aste57867_11459 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S0J0B8_9EUKA1.890e-1836.84Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
T0SBG4_SAPDV2.590e-1837.41Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A0G4IYJ5_PLABS2.910e-1837.09Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 1..95
e-value: 3.6E-24
score: 87.1
NoneNo IPR availableGENE3D1.10.472.10coord: 98..174
e-value: 2.2E-9
score: 39.5
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 1..156
NoneNo IPR availablePANTHERPTHR10026:SF13CYCLIN L1A-RELATEDcoord: 1..156
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 1..95
e-value: 2.8E-10
score: 40.0
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 100..341
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig834contigEcto-sp13_S_contig834:2782..4181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig834.19700.1mRNA_Ecto-sp13_S_contig834.19700.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig834 2782..4181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig834.19700.1 ID=prot_Ecto-sp13_S_contig834.19700.1|Name=mRNA_Ecto-sp13_S_contig834.19700.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=387bp
QETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRD
VINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDP
YRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSTAPPAVACAVIRMA
ARVHGGERRLRWYSPPVQKISKRRRGEEGDAIGGRDLRKVESGTGDRGRG
GGTGSGDGGSIVLPMERPAPPPPPPPPFPPPHGGLGGGVNGQHVIWAAGA
PPPPPPPPPPPPPPPPPPTVGDHGGISGKQGGFAGDADVVVVGVKSGGGG
RGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGESTAGK
DGSSGTTAKGGGGGDSAKSSNGRPDAEAIARAAGGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf