mRNA_Ecto-sp13_S_contig8330.19693.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: D8LE29_ECTSI (Thiaminase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE29_ECTSI) HSP 1 Score: 890 bits (2300), Expect = 0.000e+0 Identity = 484/608 (79.61%), Postives = 490/608 (80.59%), Query Frame = 2
Query: 170 MDGMRKDVGHGFTLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVANTPPPVKATAEYVDFLMAVASDPTSSVAQVLAAMVPCMRLYAFLGQELRYAFPNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDLAAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGTEELPRTGAPSGSGQCVYRASQWAEIDVFLFGGE 1993
MDGMRKDVG G TLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFL+AFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVAN ELR+AFPNW ESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGG+QG S QPGG+DAG RGRF GVHERLALLCVDFDDTLTEGDT SLLVETAKAQRETPEDRVDLGREW LLTRTFL KWSE IEDSLSTK STT CTTNGSGAVDREGLELMLRKL VVDLDSVSRVSDSK DVISRVLSETLL+SHSS SSTTGIDA G VWAGETASPRLEG CPASVSSNDLVFDEHGVSTGEI VKIPGSFGKHQRF+DLAA ARESVASSES PRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGT ELPRTGAPSGSGQCVYRASQWAEIDVFLFGGE
Sbjct: 1 MDGMRKDVGKGSTLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLRAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVAN---------------------------------------------ELRHAFPNWTESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGRQGMSAQPGGQDAGGRGRFRGVHERLALLCVDFDDTLTEGDTISLLVETAKAQRETPEDRVDLGREWGLLTRTFLGKWSETIEDSLSTKLSTT-CTTNGSGAVDREGLELMLRKLGVVDLDSVSRVSDSK---------------------------------------------------DVISRVLSETLLDSHSSSSSTTGIDAGGCVWAGETASPRLEGDCPASVSSNDLVFDEHGVSTGEILVKIPGSFGKHQRFLDLAATARESVASSESSPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGTGELPRTGAPSGSGQCVYRASQWAEIDVFLFGGE 511
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A6H5J5C1_9PHAE (TENA_THI-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5C1_9PHAE) HSP 1 Score: 811 bits (2094), Expect = 5.260e-288 Identity = 465/668 (69.61%), Postives = 482/668 (72.16%), Query Frame = 2
Query: 179 MRKDVGHGFTLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVAN---------------TP----------------PPVKATAEYVDFLMAV--ASDPTSSVAQVLAAMVPCMRLYA-------------------------------FLGQELRYAFPNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDLAAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGTEELPRTGAPSGSGQCVYRASQWAEIDVFLFGG 1990
MR DVG FTLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFL+AFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVAN TP VK +++ L + + A+ L R +A F+ QELR A PNW ES YAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFAL RKAMELEFAFFDAQLDG TEAAMLEQSVGAEAGG+QG SVQPGGKDAG RGRF GVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSE IEDSLSTK STTACTTNGSGAVDREGLELMLRKLEVVDLDS SRVSDSKV R L R+ + R A++ + GETASPRLEG CPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRF+DLAAMARESVASSES PRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFE+VARAFGIDI PLASVYEAMDG ELP TGAP GSGQ VYRASQW EIDVFLFGG
Sbjct: 1 MRMDVGERFTLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLRAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVANVRAKTTGVKLQIGSCTPLNFGLTGVWNVVHCRFASVKLHSDWAHLLYPINQGNKQMQVSAKELGERAMKRRSFAGLYLASLQIGLYRRQFHQCNVMTFADVLSSLFVAQELRDALPNWTESPYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALCRKAMELEFAFFDAQLDGVTEAAMLEQSVGAEAGGRQGMSVQPGGKDAGGRGRFRGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSETIEDSLSTKLSTTACTTNGSGAVDREGLELMLRKLEVVDLDSASRVSDSKV-RELARE-------------------IRRYFLAAIIVQREP-----------------------------------------GETASPRLEGDCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFLDLAAMARESVASSESSPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFERVARAFGIDILPLASVYEAMDGRGELPTTGAPLGSGQRVYRASQWTEIDVFLFGG 607
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A0G4GYE5_VITBC (TENA_THI-4 domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GYE5_VITBC) HSP 1 Score: 245 bits (626), Expect = 1.550e-68 Identity = 197/605 (32.56%), Postives = 284/605 (46.94%), Query Frame = 2
Query: 221 LWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAE--DEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVANTPPPVKATAEYVDFLMAVASDPTSSVAQVLAAMVPCMRLYAFLGQELRYAF--PNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGG-KDAGDRGRFHGVHER--LALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGCPAS--VSSNDLVFDEHGV-STGEIAVKIPGSFGKHQRFVDLAAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVV----GNSGSFEKVARAFGIDIRPLASVYEAMDGTEELPRTGAPSGSGQCVYRASQWAEIDVFLFGGE 1993
LWQ C+ A++SL+HPW L L + S+ ++ QDA+FL+ FAKAYA+AL K D E IRAF++LIG VL EL LH S S +W ID +T P +AT Y FL V +D ++ A VLA+M PCM LYAF+G+ LR A Y EW+ TYSS +F A VE LLD+ + L +L + E DA G ++ E G ++ P + R G+ +R L+ + +DFD T T+ DTT LL E A P+ + + W + F K+ + + L G GLE L L + +V+ VS++++L+G TRD+V + LR W+VR +S L ++S++WSQD+I +L + G P S ++ N F E +TGEI+ + G+ K + F L RE L +V++GDSVTDLLA+L+AD+GIV+ + + +KV +GID++PL +E S +Y A W EI V LFG E
Sbjct: 53 LWQKCRRRALKSLYHPWVLRLGASVLARESYVEFMRQDAFFLEIFAKAYAHALCKCPPGDVEGIRAFNALIGGVLSELTLHQS-STEWAIDT-STFTPNEATVRYTSFLRDVGADQWTTTAMVLASMAPCMSLYAFIGKALREGVGEEGMAGHRYNEWLATYSSAEFAQDAARVEELLDRYT-----DPLLSLSGQVGE------DAVR--GNLLYYYGNAMDLEYGFFDAQALPPPSCAPSASPSRHPGLAQRGVLSFVAIDFDGTCTQRDTTPLLHEVAAEVHSDPDQ---VRQRWRAIEDAFFDKYRRKVGELL-----------EGKVRDGMNGLEAFLGGLGEFEKAAVADVSEARLLQGFTRDDVRRMVKTSLRQKWQVRDACGEVLSGLLSHDVPASIISVSWSQDMIHTILQDAC-------------------------------GAPLSLPITCNSFSFREDDQRATGEISSHMTGAVDKLRAFRRL----REEKGREGRL----SVFIGDSVTDLLALLEADIGIVLKDALNKNNTLDKVISLYGIDVQPLVRAAMIAQCGQEAATVTPVSMPPMTIYAADGWDEIGVMLFGNE 589
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A2V0PBE0_9CHLO (Thiamine phosphate synthase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PBE0_9CHLO) HSP 1 Score: 253 bits (647), Expect = 4.370e-68 Identity = 200/611 (32.73%), Postives = 283/611 (46.32%), Query Frame = 2
Query: 200 GFTLPGS----LWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAEDE--EDIRAFHSLIGSVLEELGLHASYSAKWGIDVANTPPPVKATAEYVDFLMAVASDPTSSVAQVLAAMVPCMRLYAFLGQELRYAFPNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETA---KAQRETPED----RVDLGREWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHS-SLSSTTGIDARGRVWAGETASP-RLEGGCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDLAAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGTEELPRTGAPSGSGQCVYRASQWAEIDVFLFG 1987
G LPG LW +CQLEA R+L HP+ L L G +F++YVAQDA+FL FA+AYA AL K D E L+ V EL LH SY+ WG+++ A Y DFLMA A DP ++VA+VLA+MVPC RLY FLG L A P + YA+WI YSS ++ E+LLD+ + A Y L +LY++AM+LE AFF S PG A + +L DFDDT TE DT L+ A +R PE+ R L L + SK + + + L S A G D GL + +L D+ + +S +L GL+RD+V ++ ++PG ++ AL + THVVS+NWS++ ++ L ++ + + G +A V AG P RL ++ +N+L G+STG + + + K + F L A + V+VGDS TD+L +L AD GIVVG++ + G + PL + + A G + VY A+ W EI FLFG
Sbjct: 9 GLPLPGGVSERLWGECQLEAFRALQHPFVLALGLGTLPRDTFRHYVAQDAHFLHFFARAYAAALDKCADANAEAHVVLQQLLMGVHMELRLHGSYARTWGVELDALDHVDPACQAYTDFLMATAEDPETTVAEVLASMVPCSRLYGFLGCALARAHPRQRGNPYADWISMYSSFEYLVHPMQKEALLDRLAGDAPYDRLRSLYKRAMQLEVAFF---------------------------SAAPGIPAA----------RHVGMLVCDFDDTCTEKDTIGTLLSAAIDAAVKRAGPEEXXXLRARLDAVVARLVENYSSKHAALLAEILPEGASAAAA----EGGFDEAGLRAFVERLSDFDVQMNAVAVESGILAGLSRDDVAAAARAVA-----LKPGCREALAAALGAELPTHVVSVNWSREFVAAALGLPAADAADWGAAGSDGDEAAAAVIAGAAPPPGRL------AIHANELARGADGLSTGALRRAVQCARDKGRLFAALQAARGKG-----GXXXXAAVFVGDSATDVLPLLAADYGIVVGSNKLLRRALARHGASLVPLCAA--PLTAPARGGGGAASDGVARVVYEAASWDEIHAFLFG 560
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A7J7QPC3_9CHLO (Thiamine phosphate synthase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QPC3_9CHLO) HSP 1 Score: 250 bits (638), Expect = 1.050e-66 Identity = 201/630 (31.90%), Postives = 287/630 (45.56%), Query Frame = 2
Query: 188 DVGHGFTLPGSL----WQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAEDEEDIRAFHSLIGSVL----EELGLHASYSAKWGIDVANTPPPVKATAEYVDFLMAVASDPTSSVAQVLAAMVPCMRLYAFLGQELRYAFPNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPED------------RVDLGREWVLLTRTFLSKWSEAIEDSLST---KPSTTACTTNG--SGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDLAAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGTEELPRTGAPSGSG-----QCVYRASQWAEIDVFLFG 1987
D+ G +PG L W+D Q EAM +LHHP+ LA G + K+YV QD +FL FA+AYA A+ K + A +++ +L EL LH SY+AKWG+ V P AT+ Y D+LM VA+DP +SVA+VLAAM+PC RLY FLG +L A AY+EW+ETYS ++ + + E L DK + Y L LY +AM+LE FF AQ +G P + G LL DFDDT+TE DT +L+ A R L + L +++K + + L KP+ TN + D++GL L D++ V D+ L GLT+ +V ++ G +RPG R +S A + V+S+NWS+ ++ VL T A + +N+L + GVSTG++ ++ K R +D A+ ++ +SS S R VYVGDS +D+L +L AD GIV+G + + AFG+ ++PL S P T A S +Y AS W EI FLFG
Sbjct: 56 DMFSGLPVPGGLSEQLWRDTQAEAMEALHHPFVQALAAGTLDRWA-KHYVLQDLFFLTRFARAYAAAIDKCAHSPHLGAAKAVLAELLLGVDAELKLHGSYAAKWGVAVDEWVWPSAATSAYTDYLMEVATDPETSVAEVLAAMIPCARLYGFLGCQLAAATRGQPRHAYSEWVETYSGAEYLASPVIKEELFDKIAHAVPYGRLKQLYARAMQLEVNFFSAQPNG------------------------PAPRHVG-------------LLVCDFDDTITEKDTIGVLMAAAVEANVKSSXXXXXXXXXXXXLRQQLNAQVKTLADNYMTKQQQLLASLLPADDGKPAAAMSVTNSVNNKTYDKDGLLAFCEALSDFDVEMNQVVVDAGCLAGLTKADVAAAAGGIA-----LRPGSMRTLSAAAAAGLPVAVLSVNWSRSLMEAVLQPT---------------AAAXXXXXXXXXXXXXXXXXLEIYANELAWGPEGVSTGDLRREVQCGRDKG-RVMD--ALLKQHQSSSSS--RGAVVYVGDSSSDILPLLKADYGIVIGGNRLLHRALEAFGVSLQPLCSA----------PMTPASSXXXXXXXXSVLYAASSWQEIAAFLFG 612
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A383WBI9_TETOB (Thiamine phosphate synthase n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WBI9_TETOB) HSP 1 Score: 250 bits (638), Expect = 1.140e-66 Identity = 195/629 (31.00%), Postives = 277/629 (44.04%), Query Frame = 2
Query: 188 DVGHGFTLPGSL----WQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAEDEEDIRAFHSLIGSVL----EELGLHASYSAKWGIDVANTPPPVKATAEYVDFLMAVASDPTSSVAQVLAAMVPCMRLYAFLGQELRYAFPNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETA------------KAQRETPEDRVDLGREWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAV-----DREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDLAAMARES---VASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASV-YEAMDGTEELPRTGAPSGSGQCVYRASQWAEIDVFLFG 1987
D+ G +PG L W D Q EAM +LHHP+ LA G A F++YV QD +FL FA+AYA A+ K + A +++ +L EL LH SY+AKWG+ V P AT++Y DFLM VA+DP +SVA+VLAAM+PC RLY FLG +L A AY+EW+ TYS ++ + + E L DK +A Y L LY +AM+LE FF AQ +G P + G LL DFDDT+TE DT L+ A R L + L +++K + + L +A S +V D++GL L D++ V D+ L GLT+ V ++ S+ +RPG AR +S A + ++S+NWS+ ++ VL + +N+LV+ GVSTG++ +I + K + L R S VYVGDS +D+L +L AD GI++G++ K AFG+ ++PL S G +Y AS W EI FLFG
Sbjct: 29 DIFSGLPVPGGLSERLWADSQAEAMEALHHPFVQALAAGTLDRACFQHYVLQDLFFLTRFARAYAAAIDKCGTTPALAAAKAVLAELLLGVDAELKLHGSYAAKWGVAVDEWVWPSAATSQYTDFLMQVATDPETSVAEVLAAMIPCARLYGFLGCQLAAATQGLPRHAYSEWVATYSGAEYLASPVMKEELFDKIAAAEPYDRLKQLYTRAMQLEVNFFSAQPNG------------------------PAPRHVG-------------LLVCDFDDTITEKDTIGTLLGAAVEXXXXXXXXXXXXXXXXXXXRQQLNTQVKNLADNYMTKQQQLLASLLPADDDASAAAAGVSNSVTNKSYDKDGLLAFCEALSDFDVEMNQVVVDAGCLAGLTKAGVIAAA-----SNITLRPGSARTLSAAAAAGLPVALLSVNWSKSLMQAVLQPAAXXXX--------XXXXXXXXXXXXXXXXXXXXXXMEIHANELVWGPDGVSTGDLQREIQCARDKGRVMDTLLQQHRSSSXXXXXXXXXXXXAVVYVGDSSSDILPLLKADYGIIIGSNKLLRKALAAFGVGLQPLCSAPMTPSSXXXXXXXXXXXXXEGPVLYEASSWQEIAAFLFG 607
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A2K3DGU0_CHLRE (Thiamine phosphate synthase n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DGU0_CHLRE) HSP 1 Score: 239 bits (610), Expect = 3.450e-63 Identity = 213/625 (34.08%), Postives = 280/625 (44.80%), Query Frame = 2
Query: 209 LPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAE--DEEDIRAFHSLIGSVLEELGLHASYSAKWGID--VANTPPPVKATAEYVDFLMAVAS--DPTSSVAQVLAAMVPCMRLYAFLGQELRYAF-PNWAESA-----YAEWIETYSSEDFEDAAGLVESLLDKNSA-GADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSEAIEDSLSTK--PSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGC--PASVS--SNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDL----------AAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGTEELPRTGAPSGSGQCVYRA-SQWAEIDVFLFGGE 1993
L LW + Q E SLH P+ G+A G +F++YVAQDAYFL FA+AY AL+KA DE+ L+ V EEL LH SY+AKWG+D VA T P AT Y DFLM VA SVA++LAAM+PC RLY FLG L A P + A Y EW++TYSS+++ GL E + ++ + GAD L ALYR+AM+LE FF AQ + R + L VDFD+T T DT L+ A A P WV T L+ A + L + P T D GLE +L L D V + +LRG T EV ++ AG ++RP ++ AL HV+S+NWS + LS R+ AGE PA+V N L D G++TG + ++ + K +L AA A S S S VYVGDS +DL AMLD+D G+V+G++ +V R FG+ I PLA+ L P+G+ +Y A WAEI FLFG E
Sbjct: 15 LAKELWDNVQHEVFMSLHDPFVQGMAQGTLDKRAFQHYVAQDAYFLHYFARAYGIALSKALALDEQTFEDLTGLLRGVHEELQLHGSYAAKWGVDMTVAGTRPSA-ATKAYTDFLMDVADAGGQDGSVAEILAAMLPCARLYGFLGAALAGAHGPQAPDQAPPCHDYWEWVKTYSSQEYLSVPGLKERMFERLAGKGADKAKLLALYRRAMQLEAEFFAAQ-------------------------------------PYSPPPRRFSALVVDFDETCTARDTIGGLMRLAAAAAGQPGRATAGDAAWVSATSARLADAYVAAQGELLGRLLPEGAPDAT----CYDAAGLEALLAALSDFDAAMNGPVEECGILRGSTAAEVAAAGAG-----LQLRPQCREVLAGALGRGIPVHVLSVNWSDVYVGAALSAAAXXXXXXXXXXXXXXLPVRL-AGEXXXXXXXXXXXGPAAVELLCNSLQLDGSGLTTGALTKRVQSARDKRAALAELRARLPAASTAAAAADGSTDSGSSSNPAALVYVGDSTSDLGAMLDSDFGVVIGSNALLRRVCRRFGVRILPLAAA--------PLDPRRVPAGT---LYEAVGGWAEIRAFLFGVE 580
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: U5D054_AMBTC (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5D054_AMBTC) HSP 1 Score: 229 bits (585), Expect = 5.200e-63 Identity = 193/632 (30.54%), Postives = 285/632 (45.09%), Query Frame = 2
Query: 224 WQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVANTPPPVKATAEYVDFLMAVAS----------------DPTSSVAQVLAAMVPCMRLYAFLGQELRYAFPNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNS---AGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETA-----KAQRETPEDRV------DLGREWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQ------------THVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDLAAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLAS--VYEAMDGTEELPRTGAPSGSGQCVYRASQWAEIDVFLFG 1987
W E++ + + P+ + LA G L +F++YVAQDA+FLK FA+AY A A+D++ + L VLEEL +H SY+ +WG+D+ P AT +Y+DFLMA A+ + T A + AM PCMRLYAFLG+EL+ F N A+ Y +WI+ YSS+ FE AA +E LLDK S G + + LY +AM+LE FF AQ L H E+ ++ DFD T T D++++L E A K ++ E + DL W L++ + ++ + +ED + PS A D +GL L L + + SRV++S VL+GL +++ R G + S FQ HV+S W D+I S LL+ S+ SN+ ++ E VSTG I ++ K + F D+ ES+ + + ++VY+GDSV DLL +L+ADVGIV+G+S S +V FG+ PL S V + D E+ + G +Y S WAEI F+ G
Sbjct: 14 WVKFLRESVFASYSPFIVCLAAGNLELDTFRHYVAQDAHFLKCFARAYEMAEDCADDDDAKASICELRKGVLEELKMHESYAEEWGVDLVKESTPSSATTKYIDFLMATAAGKVEGGKGPSRIATPFEKTKIAAYTVGAMTPCMRLYAFLGKELQ-RFVNSADHQYKKWIDIYSSDSFEVAALQIEELLDKLSISLTGEELEVIERLYHQAMKLEIEFFSAQPISQKTLVPLSN--------------------------VHKPSEQRLIIFSDFDLTCTVVDSSAILAEIAIRTAPKVEQNGSEQPIARQSSADLRNSWGALSQQYTEEYEQCVEDIV---PSDEA------EVFDYQGLCKALEHLSEFEKRANSRVNESGVLKGLNLEDIK-------------RAGERLILQDGCTSFFQQIVKRKDELNADVHVLSYCWCGDLIRSAFSSGLLD-------------------------------VLSIHSNEFIY-EGSVSTGGIVREVESPMDKSRVFKDVL----ESIGEPD---KRVSVYIGDSVGDLLCLLEADVGIVIGSSSSLRRVGSKFGVSFVPLLSGVVKKQRDFLEDSCSSSNWKGLSGTLYTVSSWAEIHAFILG 557
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A836B2K3_CHLIN (Thiamine phosphate synthase n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A836B2K3_CHLIN) HSP 1 Score: 238 bits (607), Expect = 7.700e-63 Identity = 218/642 (33.96%), Postives = 290/642 (45.17%), Query Frame = 2
Query: 140 PAPGRKSPRVMDGMRKDVGHGFTLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAE--DEEDIRAFHSLIGSVLEELGLHASYSAKWGID--VANTPPPVKATAEYVDFLMAVAS--DPTSSVAQVLAAMVPCMRLYAFLGQELRYAF----PNWAESA--YAEWIETYSSEDFEDAAGLVESLLDKNSAG-ADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLG-REWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMSRALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARG-RVWAGETASPRLEGGCPASVSSNDLVFDEHGVSTGEIAVKIPGSFGKHQRFVDL--------AAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAMDGTEELPRTGAPSGSGQCVYRA-SQWAEIDVFLFGGE 1993
PAPG + DG+ K+ LW + Q E SLH P+ G+A G +F++YVAQDAYFL FA+AY AL+KA D+ L+ V EEL LH SY+AKWG+D VA T P AT Y DFLM VA SVA++LAAM+PC RLY FLG L A P+ A A Y EW+ TYSS D+ GL E + ++ + AD L LYR+AM+LE FF AQ + R + L VDFD+T T DT L+ A A + R G WV T + L+ A + L + + A D GL+ L L D + V +LRG T EV ++ AG ++RP +S AL HV+S+NWS + L+ + A R+ E A P +E C N L D G++TG +A ++ + K +L AA A + + S S VYVGDS +DL AMLD+D G+V+G++ +V R FGI I PLA+ L P+G+ +Y A WAEI FLFG E
Sbjct: 5 PAPGLPA---TDGLAKE----------LWDNVQHEVFMSLHDPFVQGMAQGTLDKRAFQHYVAQDAYFLHYFARAYGIALSKALALDDSTFEDLSGLLRGVHEELQLHGSYAAKWGVDMTVAGTRPSA-ATKAYTDFLMNVADAEGQDGSVAEILAAMLPCARLYGFLGAALAGAHGPQAPDQAPPAHHYWEWVRTYSSADYLSVPGLKERMFERLAGKEADKAKLLRLYRRAMQLEAEFFAAQ-------------------------------------PYSPPPRRFSALVVDFDETCTAKDTIGGLMRLAAAAAG-QQGRATAGDAAWVAATSSRLAADYVAAQGELLGRLLPEGAPD--AAAYDAAGLDAFLAALSDFDAAMNAPVEACGILRGSTSAEVAAAGAG-----LQLRPQCREVLSGALGRGIPVHVLSVNWSDVYVGAALAAPATAAVXXXXXXXXXSALPVRLAGAEGAGPAVELRC------NSLELDGAGLTTGALAKRVQSARDKRAALAELRSRLPAAPAAAAVDGASDSGSDNPAALVYVGDSTSDLGAMLDSDFGVVIGSNALLRRVCRRFGIRILPLAAA--------PLDPRRVPAGT---LYEAVGGWAEIRAFLFGVE 570
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Match: A0A8J5XNG5_DIALT (Thiamine phosphate synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNG5_DIALT) HSP 1 Score: 237 bits (604), Expect = 1.930e-62 Identity = 191/566 (33.75%), Postives = 271/566 (47.88%), Query Frame = 2
Query: 209 LPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLKAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVANTPPPVKATAEYVDFLMAVASDPTSSVAQVLAAMVPCMRLYAFLGQELRYAFPNWAESAYAEWIETYSSEDFEDAAGLVESLLDKNSAGADYPSLFALYRKAMELEFAFFDAQLDGGTEAAMLEQSVGAEAGGQQGTSVQPGGKDAGDRGRFHGVHERLALLCVDFDDTLTEGDTTSLLVETAKAQRETPEDRVDLGREWVLLTRTFLSKWSEAIEDSLSTKPSTTACTTNGSGAVDREGLELMLRKLEVVDLDSVSRVSDSKVLRGLTRDEVHSSLAGPLRSSWKVRPGMARCMS--RALVSPFQTHVVSINWSQDVISRVLSETLLESHSSLSSTTGIDARGRVWAGETASPRLEGGCPASVSSNDLVFDEHGVS---TGEI--AVKIPGSFGKHQRFVDLAAMARESVASSESLPRLMTVYVGDSVTDLLAMLDADVGIVVGNSGSFEKVARAFGIDIRPLASVYEAM 1885
L LW A RSLH P+ L LA G ASF+ YVAQDA+FL+AFA+AYA AL++ E + I SLI V++EL LH Y+AKW +D+A P AT+ Y +FL+A+A + +A VLAAM PCMRLYAFLGQ L AFP+ A AYA+W+ TYSS++F AG +E+LLD+ + G + A Y +AM+LE FF +Q +L + +RL L VDFD+T T+ T LL + A ++R EW L+ TF +++ AIE + A + V+ M+ +L + +V + LRG+ E + AG R K+R G AR RA + + V+S+NW+ + L L DA V AG T E + + D H + TGE+ A + S K F L A + A L+T+Y GDS+TDL +L A +GIV+G+S S + G+ ++PL + A+
Sbjct: 5 LSSKLWASALPLATRSLHSPFVLRLAAGTLPRASFQGYVAQDAFFLRAFARAYALALSRCESDGAIGELSSLIAGVVDELALHHGYAAKWDLDLAGVRP-TAATSAYTEFLLALARS-DAPIAVVLAAMTPCMRLYAFLGQRLCAAFPD-ASHAYADWLRTYSSDEFGALAGRIEALLDECADGVPLDAARAAYTRAMQLELDFFASQPGVAPVDGLLAPA------------------------------DRL-LFAVDFDETATDAQTLPLLAQLAAEHAGAADERAARVAEWRTLSETFAREYTMAIERIVPPXXXXXAPPAGEAAVVE------MVERLSAFERRAVEAAERGRALRGVP--EAALAKAGAERV--KLRDGFARLAYALRAAGACERAEVISVNWAAQLARAALRARL-------------DAARPVGAGATVG--AEELVRLHCNEMPVAIDAHDGAPRTTGELRAAAGLHTSADKGAAFGQLCAEYARAHAGGAG--ELLTLYAGDSITDLQPLLAARIGIVLGHSSSLRAALSSLGVRVQPLVAARRAL 509 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8330.19693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8330.19693.1 >prot_Ecto-sp13_S_contig8330.19693.1 ID=prot_Ecto-sp13_S_contig8330.19693.1|Name=mRNA_Ecto-sp13_S_contig8330.19693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=609bp MDGMRKDVGHGFTLPGSLWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNback to top mRNA from alignment at Ecto-sp13_S_contig8330:452..6303+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8330.19693.1 ID=mRNA_Ecto-sp13_S_contig8330.19693.1|Name=mRNA_Ecto-sp13_S_contig8330.19693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5852bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8330:452..6303+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8330:452..6303+ >mRNA_Ecto-sp13_S_contig8330.19693.1 ID=mRNA_Ecto-sp13_S_contig8330.19693.1|Name=mRNA_Ecto-sp13_S_contig8330.19693.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1827bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8330:452..6303+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |