prot_Ecto-sp13_S_contig83280.19690.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig83280.19690.1
Unique Nameprot_Ecto-sp13_S_contig83280.19690.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig83280.19690.1 vs. uniprot
Match: A0A6H5KNM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM8_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 2.560e-48
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0 
Query:    1 MNCSTPNATVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYPSELTKWPVTIVAPRTDEYPVAGSSGGETK 83
            MNCSTPNATVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLY SELTKWPVTIVAPRTDEYPVAGSSGGET+
Sbjct:  416 MNCSTPNATVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYQSELTKWPVTIVAPRTDEYPVAGSSGGETE 498
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BLAST of mRNA_Ecto-sp13_S_contig83280.19690.1 vs. uniprot
Match: D8LI16_ECTSI (NAGPA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI16_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 2.420e-43
Identity = 77/82 (93.90%), Postives = 77/82 (93.90%), Query Frame = 0 
Query:    1 MNCSTPNATVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYPSELTKWPVTIVAPRTDEYPVAGSSGGET 82
            MNCSTPN TVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLY SELT WPVTIVAPRTDEYPVAGSSG  T
Sbjct:  399 MNCSTPNTTVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYQSELTMWPVTIVAPRTDEYPVAGSSGDVT 480
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83280.19690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNM8_9PHAE2.560e-4897.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI16_ECTSI2.420e-4393.90NAGPA domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig83280contigEcto-sp13_S_contig83280:330..584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig83280.19690.1mRNA_Ecto-sp13_S_contig83280.19690.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig83280 330..590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig83280.19690.1 ID=prot_Ecto-sp13_S_contig83280.19690.1|Name=mRNA_Ecto-sp13_S_contig83280.19690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MNCSTPNATVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVAD
GLYPSELTKWPVTIVAPRTDEYPVAGSSGGETKEG
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