prot_Ecto-sp13_S_contig8328.19689.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8328.19689.1
Unique Nameprot_Ecto-sp13_S_contig8328.19689.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length342
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8328.19689.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 560 bits (1442), Expect = 1.920e-181
Identity = 329/342 (96.20%), Postives = 333/342 (97.37%), Query Frame = 0 
Query:    1 AAGTDRASLVVEAVSALLECGRESVASTCMLSHGLDLYYNKDVEAEAGDGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGTNERASGLAGRRIVGDAVVVLVGGGMGHGAAGSGDVDGDGAANSDRTCNPLRLREELMRERMQPRPSIEEPSEAVKAAVKRGGGSALLSETLLPRLAGRLASDALMGGSVPLARSEERSPPLFLFDGGHLCAAMHGAGINLRYLPMLRRSLGWEHEGIRQLIAAEMLARTAKHILACRLRHSRVTMGIPDEVAMPALYSDERLRAVARLMLNAVLFRTYSTDDSSGKMITSAGVAAPGHGQPPPSAREAGDGLFMST 342
            AAGTDRASLVVEAVSALLECGRESVAS CMLSHGLDLYYNKDVEAEAGDGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX APGTNERASGLAGRRIVGDAVVVLVGGGMGHGAAGSGDVDGDG AN DRTCNPLRLREELMRERMQPRPSIE PSEAVKAAV+RGGGSALLSETLLPRLAGRLASDALMGGSVPLARSEERSPPLFLFDGGHLCAAMHGAGINLRYLPMLRRSLGWEHEG RQLIAAEMLARTAKHILACRLRHSRVTMGIPDEVAMP+LYSDERLRAVA LMLNAVLFRTYS+DDSSGKM+TSAGVAAPGHGQPPPS REA DGLFMST
Sbjct:  581 AAGTDRASLVVEAVSALLECGRESVASACMLSHGLDLYYNKDVEAEAGDGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-APGTNERASGLAGRRIVGDAVVVLVGGGMGHGAAGSGDVDGDGEANGDRTCNPLRLREELMRERMQPRPSIEAPSEAVKAAVERGGGSALLSETLLPRLAGRLASDALMGGSVPLARSEERSPPLFLFDGGHLCAAMHGAGINLRYLPMLRRSLGWEHEGNRQLIAAEMLARTAKHILACRLRHSRVTMGIPDEVAMPSLYSDERLRAVAHLMLNAVLFRTYSSDDSSGKMVTSAGVAAPGHGQPPPSGREARDGLFMST 921
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BLAST of mRNA_Ecto-sp13_S_contig8328.19689.1 vs. uniprot
Match: A0A6H5L4V6_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V6_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.850e-71
Identity = 165/183 (90.16%), Postives = 167/183 (91.26%), Query Frame = 0 
Query:    1 AAGTDRASLVVEAVSALLECGRESVASTCMLSHGLDLYYNKDVEAEAGDGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGTNERASGLAGRRIVGDAVVVLVGGGMGHGAAGSGDVDGDGAANSDRTCNPLRLREELMRERMQPRPSIEEPSEAVKAAVKRGGGSALLSETLLPRLAG 183
            AAGTDRASLVVEAVSALLEC RESVAS CMLSHGLDLYYNKDVEA A DG A       XXXXXXXXXXXXXXXXXXXXX  AP TNERASGLAGRRI+GDAVVVLVGGGMGHGAAGSGDVDGDGAAN DRTCNPLRLREELMRERMQPRPSIEEPSEAVKAAV+RGGGSALLSETLLPRLAG
Sbjct:  928 AAGTDRASLVVEAVSALLECSRESVASACMLSHGLDLYYNKDVEAGAEDGLAVASSLDGXXXXXXXXXXXXXXXXXXXXX--APVTNERASGLAGRRIMGDAVVVLVGGGMGHGAAGSGDVDGDGAANGDRTCNPLRLREELMRERMQPRPSIEEPSEAVKAAVERGGGSALLSETLLPRLAG 1108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8328.19689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS90_ECTSI1.920e-18196.20eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L4V6_9PHAE1.850e-7190.16Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033646CLU central domainPFAMPF12807eIF3_p135coord: 208..267
e-value: 4.5E-10
score: 39.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8328contigEcto-sp13_S_contig8328:2900..6568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8328.19689.1mRNA_Ecto-sp13_S_contig8328.19689.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8328 2900..6569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8328.19689.1 ID=prot_Ecto-sp13_S_contig8328.19689.1|Name=mRNA_Ecto-sp13_S_contig8328.19689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=342bp
AAGTDRASLVVEAVSALLECGRESVASTCMLSHGLDLYYNKDVEAEAGDG
AAAASSLDGGGSGGGGGGSRHLLQNGGGGGSAAPGTNERASGLAGRRIVG
DAVVVLVGGGMGHGAAGSGDVDGDGAANSDRTCNPLRLREELMRERMQPR
PSIEEPSEAVKAAVKRGGGSALLSETLLPRLAGRLASDALMGGSVPLARS
EERSPPLFLFDGGHLCAAMHGAGINLRYLPMLRRSLGWEHEGIRQLIAAE
MLARTAKHILACRLRHSRVTMGIPDEVAMPALYSDERLRAVARLMLNAVL
FRTYSTDDSSGKMITSAGVAAPGHGQPPPSAREAGDGLFMST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033646CLU-central