mRNA_Ecto-sp13_S_contig8327.19687.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8327.19687.1
Unique NamemRNA_Ecto-sp13_S_contig8327.19687.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: D7FQB7_ECTSI (UDG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB7_ECTSI)

HSP 1 Score: 596 bits (1536), Expect = 5.430e-209
Identity = 299/321 (93.15%), Postives = 309/321 (96.26%), Query Frame = 1
Query:  142 MNSEQNDENPFNEFSLGASSSGAGPSSGVARARPAAARLLMDSLDSKPVKKMRKSTGAKGQTTAKGLVEKYSRSPGEPEWPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSGGEWTHR 1104
            M+ EQNDENPFNEF+LGAS SG+GP  GV RARPAAARLLMDSLDSKPVKKMR STGAKGQ+TAKGLVEKY RSPGEPEWPLRLII+GHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIP GFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRL AHAERAAATVAASKS PAEPAT+RGTDSTSAAGKGADQGVATA TIKA+IE+G PRIIAFAGKRQWEELFFDASAKDKA+TKGGK+GPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSGGEWTHR
Sbjct:    1 MSLEQNDENPFNEFALGASPSGSGPIPGVTRARPAAARLLMDSLDSKPVKKMRTSTGAKGQSTAKGLVEKY-RSPGEPEWPLRLIIVGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPPGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLTAHAERAAATVAASKSYPAEPATERGTDSTSAAGKGADQGVATAATIKAKIEDGCPRIIAFAGKRQWEELFFDASAKDKAKTKGGKTGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSGGEWTHR 320          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A0A4D9CYU0_9STRA (UDG domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYU0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 9.160e-57
Identity = 111/244 (45.49%), Postives = 139/244 (56.97%), Query Frame = 1
Query:  337 GLVEKYSRSPGEPEWPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQ 1068
            GL EKY    G+PE PLRL+++GHNPS  AW  GHYY NPSNRMW LL +  IIP G+TA +D+ CP T G+GFTD+G+  PGT S++F    LH+WRR  Y RL++HA RA A                                              P+I+AF GKRQ+ ELFFD+ A         KS    +GLQ A  RP G+PF A  T++FV+ SSSGAAAM+N ARE PY++L Q
Sbjct:   93 GLREKY----GDPERPLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSAKFKAPVLHAWRRSLYQRLLSHARRAGAP---------------------------------------------PKIVAFTGKRQFRELFFDSKAY--------KSISISYGLQSA--RPDGFPFNANETKLFVLTSSSGAAAMSNAAREMPYQELAQ 277          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: W7TJD2_9STRA (Uracil-dna glycosylase superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJD2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.120e-55
Identity = 111/244 (45.49%), Postives = 139/244 (56.97%), Query Frame = 1
Query:  337 GLVEKYSRSPGEPEWPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQ 1068
            GL EKY    G+PE PLRL+++GHNPS  AW  GHYY NPSNRMW LL +  IIP G+TA +D+ CP T G+GFTD+G+  PGT SS F    LH+WRR  Y RL++HA RA A                                              P+I+AF GKRQ+ ELFFD+ A         KS    +GLQ A  RP G+PF A+ T++FV+ SSSGAAAM+N ARE PY++L +
Sbjct:  196 GLREKY----GDPERPLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSSNFKAPVLHAWRRSLYQRLLSHARRAGAP---------------------------------------------PKIVAFTGKRQFRELFFDSKAY--------KSISISYGLQSA--RPDGFPFNADETKLFVLTSSSGAAAMSNAAREMPYQELAE 380          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A0A383VAW5_TETOB (UDG domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VAW5_TETOB)

HSP 1 Score: 189 bits (480), Expect = 5.360e-51
Identity = 110/268 (41.04%), Postives = 140/268 (52.24%), Query Frame = 1
Query:  283 PVKKMRKSTGAKGQTTAKGLVEKYSRSPGEPEWPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDEDC-PITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELF-FDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLK 1080
            PV+K ++   A     +KGL EK   +      PLRLI+IGHNPSE AW  GHYY NPSNRMW++L SAGI P G +    +D  P   GVGFTDVG   PGT SS F   +   WR  FY RL AH + A+ ++  S                                       G PR++AF GKR + EL   DAS + +       S     GLQP    PPGWP PA++TE++V+ S+SGAA M+N+ARE PYR L Q + +
Sbjct:   98 PVRKRQRKAYAALTGPSKGLPEKLGAA------PLRLILIGHNPSEHAWHTGHYYSNPSNRMWRILESAGITPPGVSGPEADDVMPAAVGVGFTDVGSGQPGTDSSLFTAADFQGWRAAFYARLAAHMKAASDSIGCSCG-----------------------------------RCGAPRLVAFTGKRHYLELLNLDASGQQRRGKDRVASAAVTLGLQPQQQLPPGWPLPADKTEVWVLTSTSGAAPMSNQAREAPYRQLAQRLAQ 324          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A0A150H3T8_GONPE (UDG domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3T8_GONPE)

HSP 1 Score: 171 bits (432), Expect = 6.200e-45
Identity = 103/243 (42.39%), Postives = 130/243 (53.50%), Query Frame = 1
Query:  382 PLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDED-CPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELF-FDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSGGEWTHR 1104
            PLRL+I+GHNPSE AW+ GHYY NPSN MW++L S GI P G   + D+D  P  +GVGF DVG   PGT SS F  +   +W R FY RL AH  RAAA++                        G   G+            G PR++AF+GKRQ+ EL     S +D+A+T         FG  P    P GWPFP   TE++V  S+SGAAAMT E RE PY+ L + + +   EW  R
Sbjct:   49 PLRLVIVGHNPSEHAWQSGHYYSNPSNLMWRILISTGIAPPGTRGAEDDDRLPREAGVGFLDVGCGHPGTDSSSFASEVFDAWSRAFYSRLKAHMARAAASI------------------------GCTCGLC-----------GAPRLVAFSGKRQFLELLNVGRSGRDRAKT-------VEFG--PQSELPRGWPFPRS-TEVWVCSSTSGAAAMTKEQREGPYKRLAERLARE--EWPRR 244          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A0A5J4XIV9_9CHLO (DNA glycosylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XIV9_9CHLO)

HSP 1 Score: 171 bits (434), Expect = 1.030e-44
Identity = 96/245 (39.18%), Postives = 132/245 (53.88%), Query Frame = 1
Query:  361 SPGEPE----WPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDEDCPIT-SGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLK 1080
            +PG PE     PLRLII+GHNPS+ AW  GHYY NPSN MW++L +  I PS  T    +DC  + +GVGFTDVG  IPGT+SS+F       W  GFY+RL AH  RA+ ++  +                   GK                  G P ++AF+GKRQW EL            + GK+   +F   P ++RP GWP P + TE++V+ S+SGA+ MT EAR  P+ +L + +++
Sbjct:  106 APGVPEKLGDHPLRLIIVGHNPSDHAWRTGHYYSNPSNWMWRILIATRIAPSHVTGPQHDDCMASDAGVGFTDVGSGIPGTISSQFDSATFQGWGAGFYERLSAHMSRASDSIGCT------------------CGK-----------------CGAPALVAFSGKRQWSELINTG--------RKGKNKLTKFATGPQNMRPEGWPLP-DSTEVWVMTSTSGASPMTTEARMAPWHELSKQLMQ 306          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A0A836CAH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH3_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.130e-43
Identity = 107/271 (39.48%), Postives = 131/271 (48.34%), Query Frame = 1
Query:  319 GQTTAKGLVEKYSRSPGEPEWPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATT-------------IKAEIEN--------GYPRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVV--PSSSGAAAMTNEARETPYRDL 1062
            G  +  GL EK  RSPG PEWPLR + +GHNPS  AW  GH+Y +PSN MW+LL +AG+ P   T  +DE  PI  GVGFTD+G   PGT S+ F +  L +WR G ++RL  H  RA                                                    +K E+E+        GYP +IAF GKRQW ELFF     +    K        +GLQ A  RPP WPFP       VV   SSSGA+A++NEAR  PYR L
Sbjct:   93 GSGSGGGLPEKL-RSPGHPEWPLRCVCVGHNPSATAWAKGHFYAHPSNHMWRLLHAAGVSPRPLTCVDDERLPIELGVGFTDLGHDCPGTNSAAFKRDVLRTWRAGLFERLRGHVRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLEMEDAAAAPERLGYPHVIAFTGKRQWRELFFGTPEAEALAKK------VDYGLQQA--RPPDWPFPPPPNGPLVVVLASSSGASALSNEARIAPYRLL 354          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A0A482SFZ9_9ARCH (UDG domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SFZ9_9ARCH)

HSP 1 Score: 165 bits (418), Expect = 1.720e-42
Identity = 112/281 (39.86%), Postives = 141/281 (50.18%), Query Frame = 1
Query:  259 LMDSLDSKPVKKMRKSTGAKGQT-----TAKGLVEKYSRSPGEPEWPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGY-PRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKS 1083
            L+  ++ +  KK R+    KG+       AKGL E Y  +PG  E  LRL+IIGHNPS +AW  GHYY NPSNRMW LL+ AGI+PS F A++D  CP   GVGFTDV F +  T SS F  + L +    F+ RL+AH  R                                           E    Y P I+AFAG RQW  LF  +S  +            RFGLQ    RPP WP     +++F++PS+SGAAAMT + RE PY  LG  +LKS
Sbjct:   76 LLGFVEGQNKKKKRQVAATKGKAEHSAAAAKGLGEMYC-TPGTEEKRLRLLIIGHNPSHQAWTKGHYYANPSNRMWPLLTKAGIVPSHFNANSDLLCPSVCGVGFTDVMFGVGETDSSLFSDEALRACTAPFFARLVAHCHRVR--------------------------NNHHXXXXXXXXXXXEDAAAYSPLILAFAGVRQWRCLFPPSSKWET-----------RFGLQ--TNRPPNWPPELASSQVFLLPSTSGAAAMTTQQREEPYIQLGM-LLKS 315          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A8IDF6_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IDF6_CHLRE)

HSP 1 Score: 164 bits (415), Expect = 6.990e-42
Identity = 103/265 (38.87%), Postives = 131/265 (49.43%), Query Frame = 1
Query:  310 GAKGQTTAKGLVEKYSRSPGEPEW----PLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDED--CPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELFFDAS--AKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLK 1080
            G++ +T     +     +PG PE     PLRL+I+GHNPSE AW  GHYY NPSN +W LL   GI P        +D   P  +GVGF DVG  +PGT SS F  +    W RGFY RL AH  RAA ++                        G   G+            G PR++AF GKRQ+ EL    +  A++K +T         FG Q A   PPGWP P   TE++V  S+SGAA MT EARE PY  L + + +
Sbjct:   99 GSRSKTAKSDSIPSLDSAPGVPEKLGDDPLRLVIVGHNPSEHAWRSGHYYSNPSNHLWPLLRRTGIAPPDRIRGPQDDGLMPAVAGVGFLDVGCGVPGTDSSRFKSEVFEGWSRGFYSRLRAHMRRAATSI------------------------GCRCGLC-----------GAPRLVAFTGKRQYLELMNVGAGPARNKVKT-------VEFGRQAA--LPPGWPLPPS-TEVWVCTSTSGAAPMTREAREQPYVQLAERLAQ 318          
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Match: A0A8J4AKJ5_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AKJ5_9CHLO)

HSP 1 Score: 167 bits (423), Expect = 6.510e-41
Identity = 97/242 (40.08%), Postives = 128/242 (52.89%), Query Frame = 1
Query:  382 PLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPSGFTASNDED-CPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATATTIKAEIENGYPRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSGGEWTHR 1104
            PLRL+I+GHNPS  AW+ GHYY +P+N MW+LL + GI P G  ++ D+D  P  +GVGF DVG   PGT SS F  +   SW + FY RL  H +RA+A++                        G   G+            G P ++AF+GKR + EL  +     K R K  + GP +       L P GWPFPA  TE++V  S+SGAAA+T E RE PYR L + M +   EW  R
Sbjct:  328 PLRLVIVGHNPSAHAWQSGHYYSHPANHMWRLLIATGIAPPGTRSAEDDDRLPAAAGVGFLDVGCGHPGTDSSSFSSEVFKSWSQAFYARLKGHMDRASASI------------------------GCSCGLC-----------GAPSLVAFSGKRHYLELL-NVGKPPKERVKTVEHGPQK-------LLPAGWPFPAAATEVWVCSSTSGAAALTREQREAPYRRLAEKMREI--EWPRR 524          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8327.19687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB7_ECTSI5.430e-20993.15UDG domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CYU0_9STRA9.160e-5745.49UDG domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TJD2_9STRA1.120e-5545.49Uracil-dna glycosylase superfamily n=1 Tax=Nannoch... [more]
A0A383VAW5_TETOB5.360e-5141.04UDG domain-containing protein n=1 Tax=Tetradesmus ... [more]
A0A150H3T8_GONPE6.200e-4542.39UDG domain-containing protein n=1 Tax=Gonium pecto... [more]
A0A5J4XIV9_9CHLO1.030e-4439.18DNA glycosylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2... [more]
A0A836CAH3_9STRA2.130e-4339.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SFZ9_9ARCH1.720e-4239.86UDG domain-containing protein n=1 Tax=archaeon Tax... [more]
A8IDF6_CHLRE6.990e-4238.87Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]
A0A8J4AKJ5_9CHLO6.510e-4140.08Uncharacterized protein n=2 Tax=Volvox africanus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8327contigEcto-sp13_S_contig8327:4033..6939 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score594.3
Seed ortholog evalue3.9e-167
Seed eggNOG ortholog2880.D7FQB7
Model size1896
KEGG koko:K20813
KEGG Pathwayko03410,map03410
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG OGs2CGCP@1,2RYQ9@2759
Ec32 ortholog descriptionUracil-DNA glycosylase-like
Ec32 orthologEc-01_006710.1
EC3.2.2.29
Cds size1146
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8327.19687.1prot_Ecto-sp13_S_contig8327.19687.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8327 4069..6225 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464102.9825933-UTR-Ecto-sp13_S_contig8327:4032..40681681464102.9825933-UTR-Ecto-sp13_S_contig8327:4032..4068Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8327 4033..4068 +
1681464103.0380037-UTR-Ecto-sp13_S_contig8327:6225..69391681464103.0380037-UTR-Ecto-sp13_S_contig8327:6225..6939Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8327 6226..6939 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464102.9955785-CDS-Ecto-sp13_S_contig8327:4068..43881681464102.9955785-CDS-Ecto-sp13_S_contig8327:4068..4388Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8327 4069..4388 +
1681464103.0060372-CDS-Ecto-sp13_S_contig8327:4748..49591681464103.0060372-CDS-Ecto-sp13_S_contig8327:4748..4959Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8327 4749..4959 +
1681464103.0162654-CDS-Ecto-sp13_S_contig8327:5299..55811681464103.0162654-CDS-Ecto-sp13_S_contig8327:5299..5581Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8327 5300..5581 +
1681464103.02734-CDS-Ecto-sp13_S_contig8327:5892..62251681464103.02734-CDS-Ecto-sp13_S_contig8327:5892..6225Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8327 5893..6225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8327.19687.1

>prot_Ecto-sp13_S_contig8327.19687.1 ID=prot_Ecto-sp13_S_contig8327.19687.1|Name=mRNA_Ecto-sp13_S_contig8327.19687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
MPLHVGPAATAVLLALFWCSRAVFSFLPVPPLSFKMNSEQNDENPFNEFS
LGASSSGAGPSSGVARARPAAARLLMDSLDSKPVKKMRKSTGAKGQTTAK
GLVEKYSRSPGEPEWPLRLIIIGHNPSEKAWELGHYYGNPSNRMWKLLSS
AGIIPSGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRG
FYDRLIAHAERAAATVAASKSSPAEPATDRGTDSTSAAGKGADQGVATAT
TIKAEIENGYPRIIAFAGKRQWEELFFDASAKDKARTKGGKSGPFRFGLQ
PADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSG
GEWTHRRRQRSGGGTSSGENGATAPPPPQQR*
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mRNA from alignment at Ecto-sp13_S_contig8327:4033..6939+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8327.19687.1 ID=mRNA_Ecto-sp13_S_contig8327.19687.1|Name=mRNA_Ecto-sp13_S_contig8327.19687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2907bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8327:4033..6939+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTTCCATGACAGCACGTAGCCCATCACGCTCATTGAATGCCGCTTCACGT GGGCCCTGCCGCTACCGCTGTGTTGCTGGCGCTGTTCTGGTGTTCCCGTG CAGTTTTTTCCTTTCTGCCCGTACCGCCCCTTTCTTTTAAAATGAATTCC GAGCAGAATGATGAAAACCCTTTCAACGAGTTTTCTCTCGGAGCATCTTC AAGTGGCGCTGGGCCAAGCTCCGGGGTTGCAAGAGCCCGACCGGCAGCGG CCAGGTTACTCATGGACAGCCTTGACAGCAAGCCAGTCAAGAAAATGCGC AAATCTACCGGCGCTAAGGGACAGACGACGGCGAAAGGCTTGGTGGAGAA GTACAGGTGAAAATATGATTTGAGAGTTTTCGACTGACACGAATTCGCTC GTAGAGGCCGCTGCTCTCTTGTCATGTGTGTGCCGCACATGGGTGCTTTG AGCGACAAACGTCCACCCAGCATGTGGCTCACCTCATCACGGTCACCAGT ACACATCACCAACTGAAGTGTTCGATACTTGACTCTGTTGCCTACGGAGC TGTGGAGTACACGCCATGCGGACAAAAAGCGGCCGAGAACAATCAGAGGC AGAGGCACCGCCGCCTACAGCTCTGCCGAGAAGATACACAGACACGGACA TCCTCCCACCTCCCACACAGCCCTCCCGGCGCTGCTGTAAAACCGCCGTC GTTTCTCACACGCAAGCAGGTCCCCTGGAGAGCCCGAGTGGCCGCTGAGG TTGATCATTATCGGCCACAACCCGAGCGAAAAGGCGTGGGAACTTGGTCA TTACTACGGCAACCCATCCAACCGAATGTGGAAGTTGCTGTCGAGTGCGG GCATAATCCCTTCCGGCTTCACCGCTTCGAACGACGAGGATTGCCCCATC ACGAGCGGCGTGGGCTTCACGGATGTGGTGCGTATACTGAATAATTGTAG GGAGAGAATTGTAGAGATTGTGTTAAAAGTCCTTTTTCTATTCCACGTCG TCGGTGACCAGCCGGGTTCCGTGACAGCTGAATGTCTCCTTCGATTTGTC GAGTTCTGACCGCAAGCACGAGGCGGGGATTCCGACGAGTAGCGCTGGTA CACGTATGCAAGGGGAAAGTCGGCAACAATTTCCGTTTGCTTTGAAACAA GCATTGCTGCGCGCGTTTGGCTTCCTCGTTCATTGTAACAACACACTAAT CGCCTCGACGTACAGCGAGTGTCGCTGACCGACAACTCAGAACCGACGCT CGCCAATTGATTTCTAGGGCTTCTCAATTCCCGGCACCGTCTCCAGCGAG TTCGGCAAAAAAGAGCTGCATTCTTGGCGGAGAGGCTTTTACGACCGATT AATAGCCCACGCCGAGCGCGCGGCGGCCACGGTAGCCGCGTCAAAATCGT CTCCAGCGGAACCGGCAACGGACCGGGGGACAGATAGTACCTCCGCGGCG GGCAAGGGGGCTGACCAAGGAGTGGCAACGGCGACGACGATCAAGGCTGA GATCGAGAATGGTTATCCCAGGATCATTGCCTTCGCTGGAAAACGCCAGG TGCAACAACTGCAGTGCTCCTGTCAAAACTTGGTGTTGATGGTGGCATTA CTCGATCGGTATCCAGTTTGTGCCTCAACCATGTCAACTACTGTACCATT GCTACAGAGATAGATCGGGCAGACTTGAGCAAATCTTGAGCCCTCCCATG ACGGAAAGCCACCCCGGGTCGTCCATTTTCCATTCTTCTTCATTACGGTC TCCAAAACCAGAACAGCCTGTTGTCCGAACCTCCGTGCAAGAAGAGCTGT GGGTCAAATAACGCTCAACATTTCTAAAACGCGCTTTTCTGTTTGCTTCC GCCGAAACAGTGGGAGGAGCTGTTTTTCGACGCTAGCGCGAAGGACAAGG CCAGGACAAAGGGGGGAAAGAGCGGCCCGTTTCGGTTCGGCCTGCAGCCG GCCGATCTGCGCCCACCCGGCTGGCCGTTCCCAGCGGAGCGGACCGAGAT GTTTGTTGTGCCGAGCAGCAGCGGCGCGGCCGCTATGACCAACGAAGCTC GCGAAACCCCGTATCGGGACCTCGGGCAGCACATGTTGAAATCGGGAGGA GAATGGACACATCGCCGTCGACAGCGAAGCGGCGGCGGAACTTCCTCTGG AGAGAATGGGGCGACGGCGCCACCGCCGCCACAGCAGCGATAGAAAGGCA TTACCAGCCACCGATGACAAGCCGCACAGGTTAGGCACGAGGAAGTCTCG CCGACGAGTATGGGAAGAGCTCCAGTCTGCGGCGATGAGTAATGTGTGGT GATCCGTCCCAGAGTATTCGCTGATTCAGGAATGATGCGCCTTGTGCGTG CAGCTTTGACTCGAGACCTGGCTCTGTTTTGAGGGGTAGGCCGCGGTGGC CAAAGTGGCGCACCGCAGTACGCACACCCACGATTGACACATGTACACGC GGAGTTCCGCGTCAAAGTAGGCTCTCAGAAGAGTAATGTAATTGTGTCCG TCGTGAACCAACAAATTGATTGTATCTTTGTACAGCACGTTTTTTTCTGG TGTGGCTTCAGGAGGCTCGAACGATTGTCGACCATCCTGTAATCGGCCTG TCATTTAGTAGTACGTCGTGTAAGTAAAAGCGTAGGAAGTAAAGAGGGGT AGACTTTTGAAGCGGTAGAAGTAGGAGCGGAAGCGGCGATCAAAACGTTG AAAATGGTCGATGAAATCGTGGACAATAGAGACAAGAAACACGAACAGAG GCCTCGGCCAAAACGCTCGGTGGGTCAAAGGAAGAGTAGGAAAGGTTGTT TGCGTGGCCTTCGCGTTGCATTTCTCCCGTTTCCGCCTACCTGCAGTCTT GGGCGCGATTACCTTCTAATGTGAGGAATCATAATCCACCACCTCTGACG GCATTAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8327:4033..6939+

>mRNA_Ecto-sp13_S_contig8327.19687.1 ID=mRNA_Ecto-sp13_S_contig8327.19687.1|Name=mRNA_Ecto-sp13_S_contig8327.19687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8327:4033..6939+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCTTCACGTGGGCCCTGCCGCTACCGCTGTGTTGCTGGCGCTGTT
CTGGTGTTCCCGTGCAGTTTTTTCCTTTCTGCCCGTACCGCCCCTTTCTT
TTAAAATGAATTCCGAGCAGAATGATGAAAACCCTTTCAACGAGTTTTCT
CTCGGAGCATCTTCAAGTGGCGCTGGGCCAAGCTCCGGGGTTGCAAGAGC
CCGACCGGCAGCGGCCAGGTTACTCATGGACAGCCTTGACAGCAAGCCAG
TCAAGAAAATGCGCAAATCTACCGGCGCTAAGGGACAGACGACGGCGAAA
GGCTTGGTGGAGAAGTACAGCAGGTCCCCTGGAGAGCCCGAGTGGCCGCT
GAGGTTGATCATTATCGGCCACAACCCGAGCGAAAAGGCGTGGGAACTTG
GTCATTACTACGGCAACCCATCCAACCGAATGTGGAAGTTGCTGTCGAGT
GCGGGCATAATCCCTTCCGGCTTCACCGCTTCGAACGACGAGGATTGCCC
CATCACGAGCGGCGTGGGCTTCACGGATGTGGGCTTCTCAATTCCCGGCA
CCGTCTCCAGCGAGTTCGGCAAAAAAGAGCTGCATTCTTGGCGGAGAGGC
TTTTACGACCGATTAATAGCCCACGCCGAGCGCGCGGCGGCCACGGTAGC
CGCGTCAAAATCGTCTCCAGCGGAACCGGCAACGGACCGGGGGACAGATA
GTACCTCCGCGGCGGGCAAGGGGGCTGACCAAGGAGTGGCAACGGCGACG
ACGATCAAGGCTGAGATCGAGAATGGTTATCCCAGGATCATTGCCTTCGC
TGGAAAACGCCAGTGGGAGGAGCTGTTTTTCGACGCTAGCGCGAAGGACA
AGGCCAGGACAAAGGGGGGAAAGAGCGGCCCGTTTCGGTTCGGCCTGCAG
CCGGCCGATCTGCGCCCACCCGGCTGGCCGTTCCCAGCGGAGCGGACCGA
GATGTTTGTTGTGCCGAGCAGCAGCGGCGCGGCCGCTATGACCAACGAAG
CTCGCGAAACCCCGTATCGGGACCTCGGGCAGCACATGTTGAAATCGGGA
GGAGAATGGACACATCGCCGTCGACAGCGAAGCGGCGGCGGAACTTCCTC
TGGAGAGAATGGGGCGACGGCGCCACCGCCGCCACAGCAGCGATAG
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