prot_Ecto-sp13_S_contig8326.19684.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8326.19684.1
Unique Nameprot_Ecto-sp13_S_contig8326.19684.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8326.19684.1 vs. uniprot
Match: A0A6H5JSP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP6_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 3.420e-63
Identity = 117/162 (72.22%), Postives = 123/162 (75.93%), Query Frame = 0 
Query:    1 GIPGATDGDPPPSQSPPLFGKLPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXETQEAARTAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAAAAVSAEPDVSVRSDGTEGEEGGVSGRVEVLALEGKWDEALLLVQGEACSLKG 162
            GIPGAT+ DPPPSQSPPLFGKLPEP                           + QEAARTAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAA  VSA P  SV SD TEGEEGGV GRVE LALEG+WD+ALLLVQG+ACS +G
Sbjct:  201 GIPGATNDDPPPSQSPPLFGKLPEPPPNSATPQHQPGTGGPDQHAAAAAVVEKMQEAARTAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAAVTVSAGPGASVPSDRTEGEEGGVPGRVEALALEGRWDDALLLVQGKACSSEG 362
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BLAST of mRNA_Ecto-sp13_S_contig8326.19684.1 vs. uniprot
Match: D7FTJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ1_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.250e-59
Identity = 112/153 (73.20%), Postives = 118/153 (77.12%), Query Frame = 0 
Query:   55 QEAARTAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAAAAVSAEPDVSVRSDGTEGEEGGVSGRVEVLALEGKWDEA--LLLVQGEACSLKGARPEVYLIPSLGSLFRFDWGMEGLSTGVPEGLSPSMTIRSGLF 205
            QEAAR AEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAA AVSAEPD S R DGT  EE GVSGRVEVLALEG       +L      C+LKGARPEVYLIP L SLFRFD G++G+ T VPEG      +R   F
Sbjct:  161 QEAARAAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERALSLVRDAAAAVAVSAEPDASARRDGTAAEEDGVSGRVEVLALEGSRGRVRGMLRRSLSCCNLKGARPEVYLIPRLWSLFRFDGGLDGVGTDVPEGQVFQSRLRLAFF 313
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8326.19684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSP6_9PHAE3.420e-6372.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTJ1_ECTSI1.250e-5973.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8326contigEcto-sp13_S_contig8326:214..1031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8326.19684.1mRNA_Ecto-sp13_S_contig8326.19684.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8326 214..1032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8326.19684.1 ID=prot_Ecto-sp13_S_contig8326.19684.1|Name=mRNA_Ecto-sp13_S_contig8326.19684.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
GIPGATDGDPPPSQSPPLFGKLPEPPPNSATPRRQPGTGGEDQHAAAAAA
VEETQEAARTAEAALATVETMWARAQHDPSPATCRAALDACAAGGQWERA
LSLVRDAAAAAAVSAEPDVSVRSDGTEGEEGGVSGRVEVLALEGKWDEAL
LLVQGEACSLKGARPEVYLIPSLGSLFRFDWGMEGLSTGVPEGLSPSMTI
RSGLFFRDVL
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