prot_Ecto-sp13_S_contig8325.19683.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8325.19683.1
Unique Nameprot_Ecto-sp13_S_contig8325.19683.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length197
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8325.19683.1 vs. uniprot
Match: D7G5Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q5_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 4.940e-91
Identity = 145/199 (72.86%), Postives = 166/199 (83.42%), Query Frame = 0 
Query:    1 MASRTTPTNEDIDAVFTSPQVASGLNAQSQPFIPGQRWCPSTSNHGASESRGASGQTHFHVETIQTGRGTIRRYTTPSLTSEIKASSTAEMPA-RSRTPMGGNDEEDSRTTEPATAAELPIAGHENTLGGPDEANVAGLIEEMKDEEGETAVV-SPTESSFST-TGGDGGRKWKGVHVGVWLAIGAGVAVGAALWSRRR 196
            MASR TPT E+IDAV++S Q A G+N Q+QPFIPGQRW PSTSN+G S SRGA GQ  FHVET QTGRGTIRR+TTPSLTS+ +A+S A+MP  +S TP+ GNDEEDSR  EP  AAE+P+A +ENTLGGPD A+VAGLIEE KDEEGETA V S TESS S+ TGGDG  KWKG+H+GVWLA+GAGVAVGAALWSRRR
Sbjct:    1 MASRATPTAEEIDAVYSSAQAAIGMNMQAQPFIPGQRWQPSTSNNGGSHSRGAGGQAQFHVETCQTGRGTIRRHTTPSLTSKNEANSVAKMPTTQSSTPVAGNDEEDSRAIEPVIAAEMPVASNENTLGGPDVAHVAGLIEESKDEEGETAAVASSTESSSSSPTGGDGRHKWKGIHIGVWLAVGAGVAVGAALWSRRR 199
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BLAST of mRNA_Ecto-sp13_S_contig8325.19683.1 vs. uniprot
Match: D7G5Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q4_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 3.020e-58
Identity = 98/132 (74.24%), Postives = 109/132 (82.58%), Query Frame = 0 
Query:   38 WCPSTSNHGASESRGASGQTHFHVETIQTGRGTIRRYTTPSLTSEIKASSTAEMPARSRTPMGGNDEEDSRTTEPATAAELPIAGHENTLGGPDEANVAGLIEEMKDEEGETAVVSPTESSFSTTGGDGGRK 169
            WCPSTSNHGAS+SRGASGQ HFHVE IQTGRGTIRRYTTPSLTSE + + +A+MPA S  P+   DEEDSR T+P TAAE+PIA +ENTL GPD A+VAGL EE KDEEG+TAV S TESS S TGGDGG K
Sbjct:   11 WCPSTSNHGASQSRGASGQAHFHVEAIQTGRGTIRRYTTPSLTSENEINISAKMPAGSSMPVADIDEEDSRATDPVTAAEVPIASNENTLAGPDAADVAGLFEEAKDEEGKTAVASSTESSSSPTGGDGGHK 142
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8325.19683.1 vs. uniprot
Match: D7G5N7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N7_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 2.360e-35
Identity = 70/94 (74.47%), Postives = 76/94 (80.85%), Query Frame = 0 
Query:   99 MGGNDEEDSRTTEPATAAELPIAGHENTLGGPDEANVAGLIEEMKDEEGETAVVSPTESSFST-TGGDGGRKWKGVHVGVWLAIGAGVAVGAAL 191
            MGGNDEED R +EP TAAE+ IA   + +GGPDEA+VAGLIEE KDEEGETAV S TE      TGGDGGRK KG+HVGVWLAIGAGVAVGAAL
Sbjct:    1 MGGNDEEDPRASEPVTAAEVDIASDGSVVGGPDEADVAGLIEETKDEEGETAVASSTEXXXXXXTGGDGGRKRKGLHVGVWLAIGAGVAVGAAL 94
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8325.19683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5Q5_ECTSI4.940e-9172.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Q4_ECTSI3.020e-5874.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5N7_ECTSI2.360e-3574.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 194..196
NoneNo IPR availableTMHMMTMhelixcoord: 175..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8325contigEcto-sp13_S_contig8325:4023..5250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8325.19683.1mRNA_Ecto-sp13_S_contig8325.19683.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8325 4023..5303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8325.19683.1 ID=prot_Ecto-sp13_S_contig8325.19683.1|Name=mRNA_Ecto-sp13_S_contig8325.19683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=197bp
MASRTTPTNEDIDAVFTSPQVASGLNAQSQPFIPGQRWCPSTSNHGASES
RGASGQTHFHVETIQTGRGTIRRYTTPSLTSEIKASSTAEMPARSRTPMG
GNDEEDSRTTEPATAAELPIAGHENTLGGPDEANVAGLIEEMKDEEGETA
VVSPTESSFSTTGGDGGRKWKGVHVGVWLAIGAGVAVGAALWSRRR*
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