prot_Ecto-sp13_S_contig8325.19682.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8325.19682.1
Unique Name	prot_Ecto-sp13_S_contig8325.19682.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	144

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.770e-62
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0

Query:   46 GSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLPEA 143
            GSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLPEA
Sbjct:  201 GSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLPEA 298

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA)

HSP 1 Score: 137 bits (345), Expect = 8.630e-38
Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 0

Query:   46 GSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            G GY V I+W+GA H V CD ETT+LEAAMDAGL+LP SCMSGSCLTCPG++ +G V+Q +GVLED+Q  AG +LTC+SYP SD+ F V+ E++L
Sbjct:  137 GDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN)

HSP 1 Score: 105 bits (263), Expect = 1.650e-26
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKV IE EG+I E+  D + T+L  A+D GL +P  C  G C+TCP K++SGSVDQSEG+L D+  D G+ L C++YP SD H   + EE+L
Sbjct:   39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A2J6KNW1_LACSA (Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KNW1_LACSA)

HSP 1 Score: 105 bits (263), Expect = 2.180e-26
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKV IE EG   E+  D + T+LE A+D+G+ +P  C  G C+TCP K++SGSVDQSEG+L D+  + G+ L C+SYP+SD H  ++ EE+L
Sbjct:   49 YKVAIEHEGETTELEVDPDETILEKALDSGMSVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 140

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A103Y2Z7_CYNCS (Ferredoxin n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y2Z7_CYNCS)

HSP 1 Score: 105 bits (262), Expect = 2.920e-26
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKV IE EG   E+  D + T+LE A+D GL++P  C  G C+TCP K++SGSV+QSEG+L D+  + G+ L C+SYP+SD H  ++ EE+L
Sbjct:   47 YKVSIEHEGQTTELEVDPDETILEKALDTGLDVPHDCKLGVCMTCPAKLLSGSVNQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 138

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49)

HSP 1 Score: 103 bits (257), Expect = 1.610e-25
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKV IE +G + E+  D E T+L  A+D+GLE+P  C  G C+TCP +++SGSVDQSEG+L D+  + G+ L C SYP SD H   + E++L
Sbjct:   46 YKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A4Y7IJ22_PAPSO (Ferredoxin n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IJ22_PAPSO)

HSP 1 Score: 103 bits (256), Expect = 2.410e-25
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKV IE EG+   ++ D + T+L  A+D+G+E+P  C  G C+TCP K++SGSVDQS+G+L D+  D GF L C +YP SD H   + EE+L
Sbjct:   48 YKVVIEHEGSTTTLDVDPDETILSKALDSGMEVPHDCKLGVCMTCPAKLISGSVDQSDGMLSDDVVDRGFALLCAAYPRSDCHIRTIPEEEL 139

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A1Q3CXQ9_CEPFO (Fer2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CXQ9_CEPFO)

HSP 1 Score: 103 bits (256), Expect = 3.330e-25
Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKV IE EG   E++   + T+L  A+D+GL +P  C  G C+TCP K+VSG+VDQSEG+L D+  + G+ L C SYP SD HF  + EEDL
Sbjct:   60 YKVVIEHEGQATELDVGPDETILAKALDSGLSVPHDCKLGVCMTCPAKLVSGTVDQSEGMLSDDVVERGYALLCASYPRSDCHFRTIPEEDL 151

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A6J1IWL8_CUCMA (Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1IWL8_CUCMA)

HSP 1 Score: 102 bits (254), Expect = 5.980e-25
Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKV IE EG   E+  DA+ ++L +A+D GL++P  C  G C+TCP ++VSG+VDQSEG+L D+  + G+ L C++YP SD H   + EE+L
Sbjct:   56 YKVVIEHEGQTTELEVDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCVAYPRSDCHIQTIPEEEL 147

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BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Match: A0A067EGN2_CITSI (Ferredoxin n=2 Tax=Citrus sinensis TaxID=2711 RepID=A0A067EGN2_CITSI)

HSP 1 Score: 102 bits (253), Expect = 6.110e-25
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 0

Query:   49 YKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEG-VLEDEQKDAGFLLTCISYPESDVHFAVVDEEDL 140
            YKVK+       E+ C  +T +L+AA DAG++LP SC +GSC TC GK+VSGSVDQS+G  LED+Q DAG++LTC++YP SDV      +E++
Sbjct:   52 YKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKVVSGSVDQSDGSFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 144

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8325.19682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5N8_ECTSI	1.770e-62	100.00	Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G...	[more]
A0A835YL41_9STRA	8.630e-38	64.21	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A7J7LHT5_9MAGN	1.650e-26	51.09	Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 ...	[more]
A0A2J6KNW1_LACSA	2.180e-26	50.00	Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6...	[more]
A0A103Y2Z7_CYNCS	2.920e-26	50.00	Ferredoxin n=1 Tax=Cynara cardunculus var. scolymu...	[more]
UPI0010A2FF49	1.610e-25	48.91	ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alb...	[more]
A0A4Y7IJ22_PAPSO	2.410e-25	48.91	Ferredoxin n=2 Tax=Papaver somniferum TaxID=3469 R...	[more]
A0A1Q3CXQ9_CEPFO	3.330e-25	51.09	Fer2 domain-containing protein n=1 Tax=Cephalotus ...	[more]
A0A6J1IWL8_CUCMA	5.980e-25	47.83	Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=...	[more]
A0A067EGN2_CITSI	6.110e-25	52.69	Ferredoxin n=2 Tax=Citrus sinensis TaxID=2711 RepI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 47..142 e-value: 4.4E-25 score: 89.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 54..126 e-value: 2.2E-14 score: 53.1
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 49..138 score: 11.184
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 49..140 e-value: 2.0E-26 score: 89.6
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 46..140
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 46..140
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 29..135

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8325	contig	Ecto-sp13_S_contig8325:3..1422 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8325.19682.1	mRNA_Ecto-sp13_S_contig8325.19682.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8325 3..1422 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8325.19682.1 ID=prot_Ecto-sp13_S_contig8325.19682.1|Name=mRNA_Ecto-sp13_S_contig8325.19682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp
AASAPVAQAPPVATAPSAVVAAPPAAVPEVAAPPAEAPPADAPPAGSGYK
VKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSG
SVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLPEA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR010241	Fd_pln
IPR036010	2Fe-2S_ferredoxin-like_sf