mRNA_Ecto-sp13_S_contig1237.1968.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: D7G910_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G910_ECTSI) HSP 1 Score: 370 bits (949), Expect = 7.070e-127 Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 2
Query: 128 MQRYLSVVTLLLCLLTTSGTRGSSSARKISRTPIAVGALSGLRIGLEPHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPPRMTGEQQEDAREKKLEQDPLFSRLKKGLGGDKEATPTTMDEYK 682
MQRYLSVV LLLCLLTTSGTRGSSSARKISRTP+AVGALSGLRIGLEPHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYD+KSRCRGLPFFYNRRTGQTICGATTW NFKNWALDRNCK SSPPRMTGEQQEDAREKKLEQDPLFSRLKKGLGGDKEATPTTMDEYK
Sbjct: 1 MQRYLSVVALLLCLLTTSGTRGSSSARKISRTPMAVGALSGLRIGLEPHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDLKSRCRGLPFFYNRRTGQTICGATTWSNFKNWALDRNCKSSSPPRMTGEQQEDAREKKLEQDPLFSRLKKGLGGDKEATPTTMDEYK 185
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A1J1H9V2_PLARL (Uncharacterized protein n=1 Tax=Plasmodium relictum TaxID=85471 RepID=A0A1J1H9V2_PLARL) HSP 1 Score: 102 bits (255), Expect = 1.030e-22 Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH + C++C +M+ L ++L E + + ++E+T NF L+ D + C GLP++YN +T ICGATT+KN +NWALD+ C P+ PP
Sbjct: 75 PHLLCFHSKDCEYCNSMEKLLKKLKEEENIKFLKLEMYENTYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYKNLRNWALDKKCNPNEPP 169
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A6V7TAL9_PLAVN (Thioredoxin-like protein, putative n=1 Tax=Plasmodium vinckei TaxID=5860 RepID=A0A6V7TAL9_PLAVN) HSP 1 Score: 99.8 bits (247), Expect = 4.220e-22 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH E C++C +M+PL ++L E + + ++E++ NF L+ D + C GLP++YN +T ICGATT+ N + WA D+ C P+ PP
Sbjct: 29 PHLLAFHSEDCEYCNSMEPLLKKLKDEEGIEFLKLEMYENSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRKWAFDKKCNPNEPP 123
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A1C3KDD6_PLAMA (Thioredoxin-like protein, putative n=1 Tax=Plasmodium malariae TaxID=5858 RepID=A0A1C3KDD6_PLAMA) HSP 1 Score: 99.8 bits (247), Expect = 1.310e-21 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH E C++C +M+ L +L E + + + ++E++ NF L+ D + C GLP++YN +T ICGATT+ N +NWALDR C P+ PP
Sbjct: 71 PHLLCFHSEDCEYCRSMEKLLTKLKEEEDVNLLKLEMYENSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRNWALDRKCNPNEPP 165
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A4V0KAJ7_PLACH (Thioredoxin-like protein, putative n=8 Tax=Plasmodium (Vinckeia) TaxID=418101 RepID=A0A4V0KAJ7_PLACH) HSP 1 Score: 100 bits (248), Expect = 2.150e-21 Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH E C++C +M+PL ++L E + + ++E++ NF L+ D + C GLP++YN +T ICGATT+ N + WA D+ C P+ PP
Sbjct: 104 PHLLAFHSEDCEYCNSMEPLLKKLKEEEGIEFLKLEMYENSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRKWAFDKKCNPNEPP 198
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A1D3RHG2_PLAMA (Thioredoxin-like protein, putative n=1 Tax=Plasmodium malariae TaxID=5858 RepID=A0A1D3RHG2_PLAMA) HSP 1 Score: 99.8 bits (247), Expect = 2.230e-21 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH E C++C +M+ L +L E + + + ++E++ NF L+ D + C GLP++YN +T ICGATT+ N +NWALDR C P+ PP
Sbjct: 92 PHLLCFHSEDCEYCRSMEKLLTKLKEEEDVNLLKLEMYENSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRNWALDRKCNPNEPP 186
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: K6UDK8_PLACD (Uncharacterized protein n=4 Tax=Plasmodium (Plasmodium) TaxID=418103 RepID=K6UDK8_PLACD) HSP 1 Score: 99.4 bits (246), Expect = 3.260e-21 Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 2
Query: 176 TSGTRGSSSARKISRTPIAVGALSGLRIGLEPHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
T R + R+ R P++ L ++ PHLL FH E C++C +MK L +L E + + ++E++ NF L+ D + C GLP++YN +T ICGATT+ N +NWALD+ C P+ PP
Sbjct: 66 TQNKRLAGKWRRRKRKPLSFLNLEKKKL---PHLLCFHSEDCEYCNSMKKLLTKLKEEEGVNFLKLEMYENSYNFELLQQLDYDNLCGGLPYYYNLKTHYNICGATTYHNLRNWALDKKCNPNEPP 188
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A0J9TCX4_PLAVI (Uncharacterized protein n=6 Tax=Plasmodium vivax TaxID=5855 RepID=A0A0J9TCX4_PLAVI) HSP 1 Score: 97.4 bits (241), Expect = 3.860e-21 Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH E C++C +M+ L +L E + + ++E++ NF L+ D + C GLP++YN +T ICGATT+ N +NWALD+ C P+ PP
Sbjct: 37 PHLLCFHSEDCEYCNSMEKLLTKLKEEEGVNFLKLEMYENSYNFELLQQLDYDNLCGGLPYYYNLKTHYNICGATTYHNLRNWALDKKCNPNEPP 131
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A151LTH7_9APIC (Uncharacterized protein n=22 Tax=Plasmodium (Laverania) TaxID=418107 RepID=A0A151LTH7_9APIC) HSP 1 Score: 98.2 bits (243), Expect = 6.850e-21 Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH + C++C +M+ L RL E ++ + + +++++ NF L+ D + C GLP++YN +T ICGATT+ N +NWA+D+ C P+ PP
Sbjct: 84 PHLLCFHSKDCEYCNSMEKLLTRLKEEEQVHILKLEMYDNSYNFELLQQLDYNNLCGGLPYYYNLKTHYNICGATTYHNLRNWAIDKKCNPNEPP 178
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Match: A0A1D3U8A9_9APIC (Thioredoxin-like protein, putative n=3 Tax=Plasmodium ovale TaxID=36330 RepID=A0A1D3U8A9_9APIC) HSP 1 Score: 97.8 bits (242), Expect = 1.080e-20 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 2
Query: 269 PHLLEFHGEQCDHCEAMKPLFRRLFLETRLVVKRHMVWEDTANFRLMSIYDMKSRCRGLPFFYNRRTGQTICGATTWKNFKNWALDRNCKPSSPP 553
PHLL FH E C++C +M+ L ++L E + + V+E++ NF L+ D + C GLP++YN +T ICGATT+ N +NWAL+R C P+ PP
Sbjct: 89 PHLLCFHSEDCEYCNSMEGLLKKLKEEEDVHFLKLDVYENSYNFELLQQLDYDNLCGGLPYYYNLQTHYNICGATTYHNLRNWALNRKCNPNEPP 183 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1237.1968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1237.1968.1 >prot_Ecto-sp13_S_contig1237.1968.1 ID=prot_Ecto-sp13_S_contig1237.1968.1|Name=mRNA_Ecto-sp13_S_contig1237.1968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp MQRYLSVVTLLLCLLTTSGTRGSSSARKISRTPIAVGALSGLRIGLEPHLback to top mRNA from alignment at Ecto-sp13_S_contig1237:715..3890+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1237.1968.1 ID=mRNA_Ecto-sp13_S_contig1237.1968.1|Name=mRNA_Ecto-sp13_S_contig1237.1968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3176bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1237:715..3890+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1237:715..3890+ >mRNA_Ecto-sp13_S_contig1237.1968.1 ID=mRNA_Ecto-sp13_S_contig1237.1968.1|Name=mRNA_Ecto-sp13_S_contig1237.1968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=558bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1237:715..3890+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |