prot_Ecto-sp13_S_contig83217.19678.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig83217.19678.1
Unique Nameprot_Ecto-sp13_S_contig83217.19678.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length65
Homology
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BLAST of mRNA_Ecto-sp13_S_contig83217.19678.1 vs. uniprot
Match: A0A6H5L7C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C1_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.630e-30
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 
Query:    9 RCPECAELLRSSQIVQHIRSTCRLLPCTLCSRLLLPADRERHVEEACPNRRRSCMRC 65
            RCPECAELLRSSQIVQHIRSTCRLLPCTLCSRLLLPADRERHVEEACPNRRRSCMRC
Sbjct:  472 RCPECAELLRSSQIVQHIRSTCRLLPCTLCSRLLLPADRERHVEEACPNRRRSCMRC 528
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BLAST of mRNA_Ecto-sp13_S_contig83217.19678.1 vs. uniprot
Match: D8LF73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF73_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.520e-29
Identity = 56/57 (98.25%), Postives = 56/57 (98.25%), Query Frame = 0 
Query:    9 RCPECAELLRSSQIVQHIRSTCRLLPCTLCSRLLLPADRERHVEEACPNRRRSCMRC 65
            RCPECAELLRSSQIVQHIRSTCRLLPCT CSRLLLPADRERHVEEACPNRRRSCMRC
Sbjct:  697 RCPECAELLRSSQIVQHIRSTCRLLPCTHCSRLLLPADRERHVEEACPNRRRSCMRC 753
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig83217.19678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7C1_9PHAE1.630e-30100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF73_ECTSI1.520e-2998.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig83217contigEcto-sp13_S_contig83217:374..568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig83217.19678.1mRNA_Ecto-sp13_S_contig83217.19678.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig83217 374..568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig83217.19678.1 ID=prot_Ecto-sp13_S_contig83217.19678.1|Name=mRNA_Ecto-sp13_S_contig83217.19678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=65bp
IRCPRNTTRCPECAELLRSSQIVQHIRSTCRLLPCTLCSRLLLPADRERH
VEEACPNRRRSCMRC
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