prot_Ecto-sp13_S_contig8315.19669.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8315.19669.1
Unique Nameprot_Ecto-sp13_S_contig8315.19669.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length949
Homology
BLAST of mRNA_Ecto-sp13_S_contig8315.19669.1 vs. uniprot
Match: A0A6H5KRH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH2_9PHAE)

HSP 1 Score: 735 bits (1897), Expect = 2.200e-245
Identity = 633/826 (76.63%), Postives = 653/826 (79.06%), Query Frame = 0
Query:  134 GLQPAVVYSMQAPSRVQLPVHSWQQQQPHYQQDPQQPRXXREHYRGSPQQGGRGGWGGRXXXXXXXXXXXXXXXXXXSGVGSLRGWGAGGAAVVGGARGDKKRERGEESELKGXXXXXXXSKGGAKASRREADGGRVGQGEQLSSVAEPSSSRQRSRPSRETPRLPEPETAESIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVSNPDHRSNVRVPRPAKLRLSSSLPRPSLPPFTLSEEGEVPHDALPVTETTRGYEYEHRLMAXXXXXXXXXXXXXXXXXXX-PYPRHMIIPNSDLDAAGFARESKERGSRAPHQQADLTSERAARTPTSTSLPSARRSQSSIRHMGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAAQGARVSTTREEAAGKSSAKPAASSSLERSSRSKAPKQRVPAPSPPAA--VSVQSSRLATRLSTSETHDAAAEHEPYA----AAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVENIRMEKKLLFQTKAVEDEVA---EAGAGXXXXLPPRTSIVVPAAPSXXXXHXXXXXXXXXXXXXXXXXXXXXXXXXLQQATAKAQREAENALRAMSEEFKRMEKGLGRDGDAAAXXXXXXXXXXSYLEEEEEGVDPRLQWGAEGSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQPQQPAPLLQPQQGQQPWQGEGSPRARYDVSSSDENGDGGDAGYVGGQAPVYSGVSPMEEDEDKEEDASSSTPXXXXXXXXXXXXXXAGISEATVTDKSRAGGGLSSARDWADEEAPRGESPV 949
            GLQPAVVYSMQAPSRVQLPVH WQQQQPHYQQD     XX EHYRGSPQ+ GR GW GR    XXXXXXXXXXXXXX                 GGARGDKKRERGEESELK XXXXX  SKGGAKASRREADGGRVGQ                                                     XXXXXXXXXXXXXXX  VSNPDHRSNVRVPRPAKLRLSSSLPRPSLPPFT SE+GEVP DALPVT+TTRGYEYEHRLMAXXXXXXXXXXXXXXXXXXX PYP+HMIIP SDL+AAGFARESK+RGS  PHQQ+DLTSERAARTPTSTS PSARRSQSSIRHMGSAEQQ NLARVTLALKMAERKGSRFTSASAIFAAATAAA+GARVST REEAAG+SSAKPAASSS ERSSRSKAPKQRVPAPSPPAA  V+V+SSR ATRLST ETHDAAAEHEPYA    A+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          L +TKA  DEVA        XXXX    T IVVPAAPS  XX XXXXXX      XXXXXXXXXXX  LQQATAKAQREAENALRAMSEEFKRME+G G D     XXXXXXX   +   EEEEGVDPRLQWGA+GSPRARYDVSSSEGE+GD AGPQPEVTGQVPLQLGAQQPQQPAPLLQ QQGQQ  QG GSPRARYDVSSSDENGDGGDA YVGGQAPV SG SPMEEDED+EE ASS T XXXXXXXXXXXXX  GISEATVTDKSRAGGG+SSARDWAD+E PRGESPV
Sbjct:   28 GLQPAVVYSMQAPSRVQLPVHPWQQQQPHYQQDXXXXXXXPEHYRGSPQKSGRSGWVGRGHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGARGDKKRERGEESELKXXXXXXATSKGGAKASRREADGGRVGQA---------------------------------------------------AXXXXXXXXXXXXXXXXXVSNPDHRSNVRVPRPAKLRLSSSLPRPSLPPFTSSEKGEVPPDALPVTKTTRGYEYEHRLMAXXXXXXXXXXXXXXXXXXXXPYPQHMIIPKSDLNAAGFARESKKRGSHTPHQQSDLTSERAARTPTSTSSPSARRSQSSIRHMGSAEQQTNLARVTLALKMAERKGSRFTSASAIFAAATAAAKGARVSTIREEAAGRSSAKPAASSSTERSSRSKAPKQRVPAPSPPAAAAVAVRSSRPATRLSTPETHDAAAEHEPYAVAACASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRTKAGTDEVAGXXXXXXXXXXXXXXXTPIVVPAAPSPMXXXXXXXXXRAEYLAXXXXXXXXXXXE-LQQATAKAQREAENALRAMSEEFKRMEEGPGLDDXXXXXXXXXXXGLGTSYLEEEEGVDPRLQWGADGSPRARYDVSSSEGENGDDAGPQPEVTGQVPLQLGAQQPQQPAPLLQ-QQGQQQGQGGGSPRARYDVSSSDENGDGGDANYVGGQAPVCSGASPMEEDEDEEEYASS-TXXXXXXXXXXXXXXGTGISEATVTDKSRAGGGVSSARDWADKETPRGESPV 799          
BLAST of mRNA_Ecto-sp13_S_contig8315.19669.1 vs. uniprot
Match: D7G3I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I5_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 6.020e-123
Identity = 367/471 (77.92%), Postives = 373/471 (79.19%), Query Frame = 0
Query:  486 MGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAAQGARVSTTREEAAGKSSAKPAASSSLERSSRSKAPKQRVPAPSPPAAVSV-----QSSRLATRLSTSETHDAAAEHEPYAAAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVENIRMEKKLLFQTKAVEDEVAEAGAGXXXX-LPPRTSIVVPAAPSXXXXHXXXXXXXXXXXXXXXXXXXXXXXXXLQQATAKAQREAENALRAMSEEFKRMEKGLGRDGDAAAXXXXXXXXXXSYLEEEEEGVDPRLQWGAEGSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQPQQPAPLLQPQQGQQPWQGEGSPRARYDVSSSDENGDGGDAGYVGGQAPVYSGVSPMEEDEDKEE-DASSSTPXXXXXXXXXXXXXXAGISEATVTDKSRAGGGLSSARDWADEEAPRGESPV 949
            MGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAAQGARVSTTREE AGKSSAKP        SSRSKAPKQRVP               QSSR ATRLST ET DAAAEHEPYA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           XXXX LPPRT IVVPAAPS  XX XXXXXX      XXXXXXXXXXXX LQQATAKAQREAENALRAMSEEFKRME+G GR  DAA           S+LE EE GVDPRLQ GA+GSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQP QPAPLLQ QQGQQPWQGEGSPRARYDVSSSDENGDG DAGYVGGQAPVYSG SPM+EDE     D SSSTPXXXXXXXXXXXXXXAG+ EATVTDKSRAGGG+SSARDWADEEAPRGESPV
Sbjct:    1 MGSAEQQANLARVTLALKMAERKGSRFTSASAIFAAATAAAQGARVSTTREEVAGKSSAKPXXXXXXXXSSRSKAPKQRVPXXXXXXXXXXXXXXXQSSRPATRLSTPETQDAAAEHEPYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPRTPIVVPAAPSPMXXXXXXXXXRAEYLAXXXXXXXXXXXX-LQQATAKAQREAENALRAMSEEFKRMEEGPGRGDDAAVAAAAAGGSGTSFLEGEE-GVDPRLQRGADGSPRARYDVSSSEGEDGDGAGPQPEVTGQVPLQLGAQQPLQPAPLLQ-QQGQQPWQGEGSPRARYDVSSSDENGDGSDAGYVGGQAPVYSGASPMDEDEXXXXXDGSSSTPXXXXXXXXXXXXXXAGVFEATVTDKSRAGGGVSSARDWADEEAPRGESPV 468          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8315.19669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRH2_9PHAE2.200e-24576.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3I5_ECTSI6.020e-12377.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 402..422
NoneNo IPR availableCOILSCoilCoilcoord: 713..751

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8315contigEcto-sp13_S_contig8315:4099..6945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8315.19669.1mRNA_Ecto-sp13_S_contig8315.19669.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8315 3985..6945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8315.19669.1 ID=prot_Ecto-sp13_S_contig8315.19669.1|Name=mRNA_Ecto-sp13_S_contig8315.19669.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=949bp
MSWNSGGGGGADQSGRAPNALPHYLQQVGGVPQQGGMILQQASPTRQQQP
GGFVGVGYQQPQQQQQQQQQQQQQGSQQVYISSGMAPPPMHQQQGANVTQ
QQQQPQMVTIAAAPPGVVHPQAWAAAGQAGGGGGLQPAVVYSMQAPSRVQ
LPVHSWQQQQPHYQQDPQQPRYQREHYRGSPQQGGRGGWGGRGHGVGAGR
GSGGSGRGFGSGVGSLRGWGAGGAAVVGGARGDKKRERGEESELKGRGKG
KATSKGGAKASRREADGGRVGQGEQLSSVAEPSSSRQRSRPSRETPRLPE
PETAESIPLPLPPSPPVAAAKAAVAAAAAATAEAAVAAATAVVSNPDHRS
NVRVPRPAKLRLSSSLPRPSLPPFTLSEEGEVPHDALPVTETTRGYEYEH
RLMAAAAAAQQYQQRQEQQQQQQPYPRHMIIPNSDLDAAGFARESKERGS
RAPHQQADLTSERAARTPTSTSLPSARRSQSSIRHMGSAEQQANLARVTL
ALKMAERKGSRFTSASAIFAAATAAAQGARVSTTREEAAGKSSAKPAASS
SLERSSRSKAPKQRVPAPSPPAAVSVQSSRLATRLSTSETHDAAAEHEPY
AAAPTSGGVLKKKSKKKKKKSVALTAAAAAPPPATAPAAAAPAAAAAVEN
IRMEKKLLFQTKAVEDEVAEAGAGAAAALPPRTSIVVPAAPSPMPAHRQQ
PAPTRAEYLAVAAAKAKAKARELQQATAKAQREAENALRAMSEEFKRMEK
GLGRDGDAAAVAAAAGGSGTSYLEEEEEGVDPRLQWGAEGSPRARYDVSS
SEGEDGDGAGPQPEVTGQVPLQLGAQQPQQPAPLLQPQQGQQPWQGEGSP
RARYDVSSSDENGDGGDAGYVGGQAPVYSGVSPMEEDEDKEEDASSSTPA
RYDVSSSDDTGSGAGISEATVTDKSRAGGGLSSARDWADEEAPRGESPV
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