mRNA_Ecto-sp13_S_contig8311.19666.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: D7FM20_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM20_ECTSI) HSP 1 Score: 426 bits (1096), Expect = 1.700e-139 Identity = 218/232 (93.97%), Postives = 224/232 (96.55%), Query Frame = 1
Query: 961 VSSSIAPVPAEGEWADQIRVKDELISTLRRQLTALGEQPIEE-----EAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVYK 1641
VSSSIAPVPA+GEWA+Q+R+KDELISTLRRQLTALGEQPIEE EAKKRLREAIDALMAGDASAE+ELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKR+FDRKVLWLIRAPI MVSKTHVVELKSKYLANDLDVVESRALHACLP TFENDADGAKTAWRA FRKRLKELLDKEAAGQLKPAELRRPVYK
Sbjct: 10 VSSSIAPVPADGEWAEQVRIKDELISTLRRQLTALGEQPIEEVVTLEEAKKRLREAIDALMAGDASAEMELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRMFDRKVLWLIRAPIGMVSKTHVVELKSKYLANDLDVVESRALHACLPSTFENDADGAKTAWRAGFRKRLKELLDKEAAGQLKPAELRRPVYK 241
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A7S2RMF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMF6_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.850e-39 Identity = 84/201 (41.79%), Postives = 130/201 (64.68%), Query Frame = 1
Query: 1033 ISTLRRQLTALGEQPIEE-----EAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAE 1620
I L+ QL G +PI+E EAK+RL+ A++ ++ G+ A+++ +KWD+Y+ HP+H +EQ + WE N KN +AL ++TFVPPDI++A LDGL+ G+ LAKR++DRK+LW R+ ++++KTH +LK K+ LD+ E RA+ A LP TF+ND+ G K WR F +LKE++ +E +L A+
Sbjct: 660 IEMLKLQLKNAGVKPIDEVVSLEEAKQRLKRAVEQMIGGNEDAQVDF--DKWDEYIRCHPEHKEEQQRLAREWEEKNREKNEQALRALRTFVPPDIYYATLDGLKLRGVQTPLAKRLWDRKILWWCRSEPSIIAKTHAADLKVKFAFQGLDLRELRAVSAMLPQTFDNDSTGDKKKWRENFMTKLKEMVQQEEQNRLPAAQ 858
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A7S2R6X4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6X4_9STRA) HSP 1 Score: 160 bits (404), Expect = 4.300e-38 Identity = 88/216 (40.74%), Postives = 129/216 (59.72%), Query Frame = 1
Query: 1012 IRVKDELISTLRRQLTALGEQPIEE-----EAKKRLREAIDALMAGDASAEIELA-LEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVYK 1641
++ K+ I+ L +QL + G+Q I E +A+ L+EA+ LM+G+ + + A +KWD++V NHP+ I ++ A+ +AW+ A P N AL LM+TFVPP+I+ + L L+ GL L KR++++KVLWL RAP +++ HV +L KY LD++E RA+ A LP FEND D K WR RLKEL+ E G L R YK
Sbjct: 239 LKEKETHIAMLIKQLESHGDQAITEVVSLDKAQASLQEALGQLMSGEGNLDAAQAEFDKWDRFVRNHPEFIAQEQAKREAWDQAQAPLNTSALQLMRTFVPPNIWSSSLTTLKDSGLPSGLVKRLWEKKVLWLTRAPKDFIARIHVADLNMKYSIQGLDLMELRAVWAALPEKFENDGDDRKAGWRLKIHDRLKELVSSEDRGSLSGPLRRHASYK 454
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A7S2SCH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH3_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.010e-37 Identity = 82/207 (39.61%), Postives = 124/207 (59.90%), Query Frame = 1
Query: 1033 ISTLRRQLTALGEQPIE----EEAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVYK 1641
++ L+ QL A+G +P+E + A+++++EA+ LMAGD AE ++ EKWD + +P++ +EQ + + W N+ KN EA M+ VPPDI L L GL ALAKR++D+K+LW++R ++ H +L++KY LD++E RA+ LP FEND DG K WR FR++L+EL KE +L E R YK
Sbjct: 74 VAMLKHQLKAVGAEPVECVTLDVAREKMQEAVQRLMAGDEMAEKDI--EKWDTAIKMNPEYQQEQEEKARKWAEDNKEKNEEACRTMRGLVPPDIKQCSLKTLMERGLPRALAKRLWDKKILWMLRMHPLDIALIHQADLRAKYPNQGLDIIEMRAVWTVLPEDFENDGDGKKAEWRFNFRQKLEELTTKEEQNRLARNEKRNNAYK 278
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A836C9Q7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q7_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.630e-37 Identity = 84/207 (40.58%), Postives = 124/207 (59.90%), Query Frame = 1
Query: 1033 ISTLRRQLTALGEQPIE----EEAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVYK 1641
I+ L++QL + G+ +E E AK+R+++A+ LMAGD SAE ++ ++WDK + HPD+ KEQ + WEA N N +AL LM+ FVPPDI + + + G+ AKRI+ KVL +R + K H+ +L++ Y LDVVE RA+ A +P F+ D+D K WR F ++L+EL KEA+G L E R P +K
Sbjct: 48 IALLKKQLASTGQVALEFVSLETAKERMQQAVTKLMAGDESAEKDI--DRWDKTIRMHPDYAKEQEERAKQWEADNLAANQQALALMRKFVPPDIGASSIAKMAAEGVPAVAAKRIWKVKVLHWVRWHPDDIKKVHIADLQTTYSNQGLDVVEMRAVWAAMPQEFDLDSDAKKAQWRLFFCQKLQELTTKEASGMLSRNERRNPAWK 252
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A7S2G2R7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2R7_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.650e-30 Identity = 80/212 (37.74%), Postives = 119/212 (56.13%), Query Frame = 1
Query: 1021 KDELISTLRRQLTALGEQPIEE-----EAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPI-AMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVY 1638
K LI L QL +PI E EAK+R++ A+ ++ GD AE +KWD Y+ HPD+++++A + W + + + AL LM +++P DIF+ L G++PALA+RIFD+KVLW +R P + ++K H +L KY LD+VE++A+ A +P FEND G K WR +L+EL K G L E+R Y
Sbjct: 154 KGTLIQLLMSQLKGANIEPILEVVGLEEAKERMKNAVSLMLQGDIEAEA--VFDKWDTYIRAHPDYVRDEARKLAEWTESTKRDCDIALQLMLSYIPGDIFNISKAELINRGVSPALARRIFDKKVLWWLRLPNQSTIAKMHGADLTYKYSMQGLDLVETQAVWAVVPDKFENDRSGEKEQWRQNCLLKLRELTKKRDKGTLAKKEVRAAAY 363
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: F0XVV0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV0_AURAN) HSP 1 Score: 135 bits (340), Expect = 5.480e-30 Identity = 84/235 (35.74%), Postives = 127/235 (54.04%), Query Frame = 1
Query: 994 GEWADQIRVKDELISTLRRQLTALGEQPIEE-----EAKKRLREAIDALMAGDAS------------AEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGL--DGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACL-PMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVY 1638
G Q+ K+ I+ L +QL A G+ I E EAK RL+ A+ ++ GD + AE E +EKWD ++T+HP+H++ Q A + W AN +A +KT VPPD+F +G + L GL+ ALA+R+++R LWL+RA A ++ H +L+ K+ DLD+ E RAL+ + + FENDA K AWR +RL+ + + AG L + R Y
Sbjct: 281 GSLRAQLEQKEVQIAMLTKQLEAAGQSAITEVVPLAEAKHRLQAALAVIVGGDGASKRRASERQLTQAEAEAEMEKWDTFITHHPEHVEAQRAARERWWDANGEACADAARALKTCVPPDVFASGTSRERLVAAGLSEALAQRVYERPALWLLRAEDAFAARVHDADLRGKFAFEDLDLRELRALYGRVRDLAFENDAARRKDAWRDGLLERLQSRVAADDAGSLDKRKRRHAAY 515
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A2P6FUZ7_9RHOB (Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2P6FUZ7_9RHOB) HSP 1 Score: 127 bits (319), Expect = 4.240e-29 Identity = 75/210 (35.71%), Postives = 116/210 (55.24%), Query Frame = 1
Query: 1027 ELISTLRRQLTALGEQPIEE-----EAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIF-HAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVY 1638
E I L+ QL G +PI E + K +LR A++A++ D+ ++ +EKWD+++ NHP IKEQ E + WEA + +A + K ++P DIF +A + L G++ LA RI + LWL+R V+ H+ +LK KY LD++E RAL++CLP F+ND + K W+ + LK+L +KE L +R Y
Sbjct: 77 EHIELLKSQLENAGIRPISEITSYEDGKSQLRSALEAVIKEDSFLNLK-EVEKWDEFIKNHPQFIKEQKEENKIWEANAQVAAEKARNEQKKYIPEDIFKNASIINLNNYGVSKNLATRIMRNRALWLVRMDKKDVANVHIADLKFKYSFTGLDIIELRALYSCLPDKFDNDXNNEKEDWKNSLIQSLKDLENKEKNNTLPKRLIRNSAY 285
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A8J2X0D2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0D2_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.120e-28 Identity = 87/235 (37.02%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 979 PVPAEGEWADQIRVKDELISTLRRQLTALGEQPIE------EEAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHA-----GL---DGLRGGGLTP-ALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVY 1638
P A+ + +I + ++ LR +L + ++P E ++ + LR A + GD SAE EL E+ D + HPDH QA W++ NN AL L ++ VPPDI + GL D L+ ALA+R++ K L +RAP ++ K HV +L+ Y LD+VE RA++ACLP F ND DGAK AWR R++L ++ KEA+G L PAE R Y
Sbjct: 370 PSEAQVNTSKRIAELEATVAALRSELNRV-KKPTEKQQQSIDDIESELRAATARCLQGDPSAESEL--ERLDAALRAHPDHKIRQAKARANWDSEQRTANNNALALTRSLVPPDILKSTAKDVGLRICDALQSDDKPALALARRVWSAKALRAVRAPSELLRKAHVADLRGTYTPTGLDIVELRAVYACLPREFANDGDGAKAAWRESVREKLVAMVAKEASGSLTPAEKRNSAY 601
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Match: A0A7S3K3I4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3I4_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.780e-27 Identity = 70/185 (37.84%), Postives = 104/185 (56.22%), Query Frame = 1
Query: 1084 EEAKKRLREAIDALMAGDASAEIELALEKWDKYVTNHPDHIKEQAAEEQAWEAANEPKNNEALHLMKTFVPPDIFHAGLDGLRGGGLTPALAKRIFDRKVLWLIRAPIAMVSKTHVVELKSKYLANDLDVVESRALHACLPMTFENDADGAKTAWRACFRKRLKELLDKEAAGQLKPAELRRPVY 1638
E+A+ R R A++A DA+ W + HP++I+ Q E +AWE +PK +EAL +M+TF+PP LD L GL+ ALA+RI + L L+R ++K H +L Y ++ LD++E RA++A LP +F+ D DG K WR R +LK L +E+AG L E+R Y
Sbjct: 7 EKAENRFRAALEAENYDDAAL--------WGDIIKVHPEYIEAQRRENEAWEIKIKPKCDEALTIMRTFIPPTPTKWTLDKLVEAGLSLALARRIRRMRALHLVRLHPDDIAKIHAADLTHTYASSGLDIIELRAMYAVLPASFDADPDGKKAKWRDAVRDKLKGLETRESAGTLTKNEIRAGAY 183 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8311.19666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8311.19666.1 >prot_Ecto-sp13_S_contig8311.19666.1 ID=prot_Ecto-sp13_S_contig8311.19666.1|Name=mRNA_Ecto-sp13_S_contig8311.19666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=547bp MRHHHSSAVGRPPAANSNISRGDWVNKLNDARREWMVMLHRYQNSSSSGNback to top mRNA from alignment at Ecto-sp13_S_contig8311:4269..6908+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8311.19666.1 ID=mRNA_Ecto-sp13_S_contig8311.19666.1|Name=mRNA_Ecto-sp13_S_contig8311.19666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2640bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8311:4269..6908+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8311:4269..6908+ >mRNA_Ecto-sp13_S_contig8311.19666.1 ID=mRNA_Ecto-sp13_S_contig8311.19666.1|Name=mRNA_Ecto-sp13_S_contig8311.19666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1641bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8311:4269..6908+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |