mRNA_Ecto-sp13_S_contig830.19655.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Match: D7G0U2_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U2_ECTSI) HSP 1 Score: 1114 bits (2882), Expect = 0.000e+0 Identity = 586/656 (89.33%), Postives = 604/656 (92.07%), Query Frame = 1
Query: 1 MPFMLGMLQNAQDQAASPPVSPRNSRCPGGGSLVAGTGDDESCAAADISDGDSTAGNDLAGHKRTRRRTGLVGFGGGRGASRRNPTPRPAAMVNKESERPPLTSLLPINRTPTVDHEEAPRPVGTIRKLRQNSVRIIQRLPGLKLLMQVLGEEIDPKNVRHTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAMGPGSGEGAAELCARRSSSTATVTTSRGEGDLFIIGADGPDPHSASAAGCTVFSPGLSELSLDSPLLLSSSPTSSSLTDAEERYGAVFSGQFSGMMDLFGIVSLHVSFADTEVQESLPDPTSVDIALEACVAGVTAAVGESSSQADVEWGTCEEGWLPVLFQENISARVRRLPESRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYESGATTEWAKIVLAVVLMCWVPVWLAWCLTVFYKSSEGGFKNALHERKWLASLGLSVVFYLNPIKVVGNFASPESASWGLASEMCFSVAVVMFLVVGLCIAGGVARDRVG*GLLGFYVPKAAAARIFIVRVWVVWMLFRMYTSGRLLRKLPYVPNRFRQLSYRFFGLQALLLSIVYVMFMLWRLIDTLNDDAGEQSLAAQLMLSVKTRQ 1968
MP MLGMLQNAQDQAASPPVSPRNSRCPGGGSL G GD ES AAA ISDGDST GNDLAGHK T RR GLVG GGGR ASR+NPTP PAA VNK ER PL SL PINRTPTVDHEEAPR VGTIR+LRQNSVRIIQRLPG KLLMQVL EIDPKNVR TTQSEPVILMEVMPAALVISLLALTYLVF SSV +IVWFHLRGTTTLAMGPGSGEGAAELC R SSTATVTTS GE D+FIIGADGPDP+S SAAGCTVFSPGLSELSLDSPLL SSSPTSSSLTDAEERYGAVFSGQFSGM DLFGIVSLHVSFADTEVQESLPDP VDIALEACVAGV AAVGESSSQAD+EWGTCEEGWLPVLFQENISARVR LPE+RGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYE+GATTEWAK VLAVVLMCWVPVWLAWC TVFYK+SE GFKNALHERKWLASLGLSVVFYLNPIKVVGNFA PESASWGLASEMCFSVAVVMFLVVGLCIAGGV+RD VG GLLGFYVPKAAAARI +VRVWVVW+LF MYTSGRLLRKLPYVPNRFRQLSYRFFGLQA+LL +VYVMF LWRL+DTLNDD G ++LAAQL+LSVK RQ
Sbjct: 1 MPSMLGMLQNAQDQAASPPVSPRNSRCPGGGSLFVGKGDGESSAAAAISDGDSTGGNDLAGHKHTSRRMGLVGLGGGREASRKNPTPVPAAAVNKGRERSPLASL-PINRTPTVDHEEAPRLVGTIRRLRQNSVRIIQRLPGPKLLMQVLEGEIDPKNVRLTTQSEPVILMEVMPAALVISLLALTYLVFTSSVLIIVWFHLRGTTTLAMGPGSGEGAAELCVRSPSSTATVTTSGGETDVFIIGADGPDPYSPSAAGCTVFSPGLSELSLDSPLLSSSSPTSSSLTDAEERYGAVFSGQFSGMTDLFGIVSLHVSFADTEVQESLPDPAPVDIALEACVAGVAAAVGESSSQADLEWGTCEEGWLPVLFQENISARVRSLPENRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYETGATTEWAKSVLAVVLMCWVPVWLAWCWTVFYKTSEKGFKNALHERKWLASLGLSVVFYLNPIKVVGNFAFPESASWGLASEMCFSVAVVMFLVVGLCIAGGVSRDWVGGGLLGFYVPKAAAARILMVRVWVVWILFCMYTSGRLLRKLPYVPNRFRQLSYRFFGLQAILLGVVYVMFALWRLVDTLNDDVGGKTLAAQLLLSVKARQ 655
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Match: D8LEN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN2_ECTSI) HSP 1 Score: 792 bits (2045), Expect = 1.520e-275 Identity = 456/707 (64.50%), Postives = 499/707 (70.58%), Query Frame = 1
Query: 1 MPFMLGMLQNAQDQAASPPVS-PRNSRCPGGGSLVAGTGDDESCAAADISDGDSTAGNDLAGHKRTRRRTGLVGFGGGRGASRRNPTPRPAAMVNKESERPPLTSLLPINRTPTVDHEEAPRPVGTIRKLRQNSVRIIQRLPGLKLLMQVLGEEIDPKNVRHTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAMGPGSGEGAAELCARRSSSTATVTTSRGEGDLFIIGADGPDPHSASAAGCTVFSPGLSELSLDSPLLLSSSPTSSSLTDA-EERYGAVFSGQFSGMMDLFGIVSLHVSFADTEVQESLPDPTSVDIALEACVAGVTAAVGESSSQADVEWGTCEEGWLPVLFQENISARVRRLPESRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYESGATTEWAKIVLAVVLMCWVPVWLAWCLTVFYKSSEGGFKNALHERKWLASLGLSVVFYLNPIKVVGNFASPESASWGLASEMCFSVAVVMFLVVGLCIAGGVARDRVG*GL---LGFYVPKA----------------------------------------------AAARIFIVRVWVVWMLFRMYTSGRLLRKLPYVPNRFRQLSYRFFGLQALLLSIVYVMFMLWRLIDTLNDDAGEQSLAAQLMLSVKTRQ 1968
MP MLGMLQNAQDQAASP + NS GSLV G GD+ES AAA +D +TAGND AG KRT RR + EA VG ++LR SVR IQRLPG +LLMQVL EEIDPKNVR TTQSEPVILMEVMPAALV+SLL LTYLVFA V LIV FHLRGT+TL MGPG+G GA ELCA SS SRGEGD+FIIGA+GPDPHS SAAGCTV SPGLSELSLDSPLL SSS TSSSLTDA EERYGAVFSGQFSGM DL G VSLHVSFADTEVQESLPDP +VDIALEAC AGVTA V +S++QA +EWG CEEGW PVLFQE+ISARVR LPE+RGYT+FNFYQNQ+TI GQALVRQYRVQVGFVS+T SGS EE FS +SEA+WSLEYE+GAT EWAKIVLAVVL+CWVPVWLAWC TVFYK+ EGGFKNALHERKWLA +GL+V YLNPI VVGNF +P SASWGLASEM SVAV +FLVV LCIA GVA+DRVG G LGFYVPK A+ARIF+V +W VWML R+Y SG LLRKLPYVPNR++QLSYRFF LQA LL IVYV F LWRLID LNDD G ++AA+ ML +KTRQ
Sbjct: 112 MPSMLGMLQNAQDQAASPVSALSSNSHYLSDGSLVVGAGDNESSAAAATADRGATAGNDPAGPKRTSRRMNM----------------------------------------------EATPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLTMGPGAGNGAGELCAWGSSXXXXXXXSRGEGDIFIIGAEGPDPHSPSAAGCTVLSPGLSELSLDSPLLSSSSSTSSSLTDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADTEVQESLPDPATVDIALEACAAGVTAGVRDSTNQAVLEWGVCEEGWQPVLFQEDISARVRSLPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTTXXXXXXXXSGSTEEPFS-LSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVAKDRVGGGAGGSLGFYVPKVVFGVLTLALMLLVDLTSFPTLTGMDRGSLLAVQNWPESQRHAFAGVASARIFMVMLWAVWMLCRIYISGCLLRKLPYVPNRYQQLSYRFFALQAFLLGIVYVTFALWRLIDILNDDLGGNTVAAEFMLFIKTRQ 771
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Match: A0A6H5KRH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH3_9PHAE) HSP 1 Score: 776 bits (2005), Expect = 5.360e-268 Identity = 456/707 (64.50%), Postives = 493/707 (69.73%), Query Frame = 1
Query: 1 MPFMLGMLQNAQDQAASPPVS-PRNSRCPGGGSLVAGTGDDESCAAADISDGDSTAGNDLAGHKRTRRRTGLVGFGGGRGASRRNPTPRPAAMVNKESERPPLTSLLPINRTPTVDHEEAPRPVGTIRKLRQNSVRIIQRLPGLKLLMQVLGEEIDPKNVRHTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAMGPGSGEGAAELCARRSSSTATVTTSRGEGDLFIIGADGPDPHSASAAGCTVFSPGLSELSLDSPLLLSSSPTSSSLTDA-EERYGAVFSGQFSGMMDLFGIVSLHVSFADTEVQESLPDPTSVDIALEACVAGVTAAVGESSSQADVEWGTCEEGWLPVLFQENISARVRRLPESRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYESGATTEWAKIVLAVVLMCWVPVWLAWCLTVFYKSSEGGFKNALHERKWLASLGLSVVFYLNPIKVVGNFASPESASWGLASEMCFSVAVVMFLVVGLCIAGGVARDRVG*GL---LGFYVPKA----------------------------------------------AAARIFIVRVWVVWMLFRMYTSGRLLRKLPYVPNRFRQLSYRFFGLQALLLSIVYVMFMLWRLIDTLNDDAGEQSLAAQLMLSVKTRQ 1968
MP MLGMLQNAQDQAASP + NS SLV G D +TAGND AG R T NK ERP LT L INRTP HEE VG ++LR SVR IQRLPG +LLMQVL EEIDPKNVR TTQSEPVILMEVMPAALV+SLL LTYLVFA V LIV FHLRGT+TLAMGPG+G GA ELCA SSSTATVTTS GEGD+FIIGADGPDPHS SAAGCTV SPGLSELSLDSPLL SSS TSSSLTDA EERYGAVFSGQFSGM DL G VSLHVSFADTEVQESLPDP +VDIALEACVAGVTA VG+S+ QA +EWG CEEGW PVL LPE+RGYT+FNFYQNQ+TI GQALVRQYRVQVGFVS+T EE FS +SEA+WSLEYE+GAT EWAKIVLAVVL+CWVPVWLAWC TVFYK+ EGGFKNALHERKWLA +GL+V YLNPI VVGNF +P SASWGLASEM SVAV +FLVV LCIA GV +DRVG G LGFYVPK A+ARIF+V +W VWML R+Y SG LLRKLPYVPNR++QLSYRFF LQA LL IVYV F LWRLID LNDD G ++AA+ ML +KTRQ
Sbjct: 248 MPSMLGMLQNAQDQAASPVSTLSSNSHFLSDSSLVVGAXXXXXXXXXXXXDRGATAGNDPAGP----RSTSXXXXXXXXXXXXXXXXXXXXXAGNKGGERPLLTPLS-INRTPNFYHEETTPAVGPTKRLRDKSVRFIQRLPGPRLLMQVLEEEIDPKNVRLTTQSEPVILMEVMPAALVVSLLVLTYLVFACGVVLIVRFHLRGTSTLAMGPGAGNGAGELCAWGSSSTATVTTSGGEGDIFIIGADGPDPHSPSAAGCTVRSPGLSELSLDSPLLSSSSSTSSSLTDADEERYGAVFSGQFSGMTDLSGSVSLHVSFADTEVQESLPDPATVDIALEACVAGVTAGVGDSTGQAVLEWGVCEEGWQPVL-----------LPENRGYTMFNFYQNQETIRGQALVRQYRVQVGFVSSTXXXXXXXXXXXXTEEPFS-LSEARWSLEYETGATEEWAKIVLAVVLVCWVPVWLAWCWTVFYKNGEGGFKNALHERKWLAFMGLAVALYLNPIMVVGNFVAPGSASWGLASEMSLSVAVAVFLVVALCIADGVGKDRVGGGAGGSLGFYVPKVVFGVLTLALMLLVDLTSFPTLTAMDRGSLLAVQNWPESQRHAFAGVASARIFMVMLWAVWMLCRIYISGCLLRKLPYVPNRYQQLSYRFFALQAFLLGIVYVTFALWRLIDILNDDLGGNTVAAEFMLFIKTRQ 937
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Match: A0A6H5KPV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV3_9PHAE) HSP 1 Score: 590 bits (1520), Expect = 2.890e-201 Identity = 380/694 (54.76%), Postives = 396/694 (57.06%), Query Frame = 1
Query: 1 MPFMLGMLQNAQDQAASPPVSPRNSRCPGGGSLVAGTGDDESCAAADISDGDSTAGNDLAGHKRTRRRTGLVGFGGGRGASRRNPTPRPAA-MVNKESERPPLTSLLPINRTPTVDHEEAPRPVGTIRKLRQNSVRIIQRLPGLKLLMQV---------------------------------------------------------------------------------------------------------------------LGEEIDPKNVRHTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAMGPGSGEGAAELCARRSSSTATVTTSRGEGDLFIIGADGPDPHSASAAGCTVFSPGLSELSLDSPLLLSSSPTSSSLTDAEERYGAVFSGQFSGMMDLFGIVSLHVSFADTEVQESLPDPTSVDIALEACVAGVTAAVGESSSQADVEWGTCEEGWLPVLFQENISARVRRLPESRGYTLFNFYQNQDTIWGQALVRQYRVQV---------------------------GFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYESGATTEWAKIVLAVVLMCWVPVWLAWCLTVFYKSSEGGFKNALHERKWLASLGLSVVFYLNPIKVVGNFASPESASWGLASEMCFSVAVVMFLVVGLCIAG 1647
MP MLGMLQNAQDQAASPP GD ES A A ISDG +T GNDLAGH+ T RR G+V GGGR ASRRNPTP PAA +VNK ER PL SL PI+RTPTVDHEEAPR VGT+ +LRQ SVRIIQRLPG KLLMQV LGE IDPKNVR TTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLA+GPGSGEGAAELCARRSSST T+TTS GEGD+FIIGA GPDPHS SAAGCTVFSPGLS LSLDSP+L SSS TSSSLTDAEER L E+RGYTLFNFYQNQDTIWGQALVRQYRVQV GFVSTTASSSSTGGSS SAEESFSWVSEA WSLEYESGATTEW KIVLAV+LMCWVPVWLAWCLTVFYKSSE GFKNA HERKWL+SLGLSVVFYLNPIKVVGNFASPESASW L SEMCFSVA V + V + AG
Sbjct: 76 MPSMLGMLQNAQDQAASPP------------------GDGESSATAAISDGGATGGNDLAGHQLTSRRIGVVDLGGGREASRRNPTPVPAAAVVNKGRERSPLPSL-PISRTPTVDHEEAPRLVGTLWRLRQISVRIIQRLPGPKLLMQVSPILSVGFRRRSQVIPERNLNTTYDQQVFEVHHWAIATRVLWNRCFRGGQHTNRAHACVMDRKLVNPLNTLCKSHPTRRLAFLNKRFIGDSILPIRPFVLGPPPRKHDSSVKTLATVLGEAIDPKNVRLTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAVGPGSGEGAAELCARRSSSTVTITTSGGEGDVFIIGAHGPDPHSPSAAGCTVFSPGLSGLSLDSPILSSSSSTSSSLTDAEER----------------------------------------------------------------------------------------LAENRGYTLFNFYQNQDTIWGQALVRQYRVQVCSHPVSGRFRLSLRAFAHRHHPWIVHVGFVSTTASSSSTGGSSDSAEESFSWVSEAMWSLEYESGATTEWEKIVLAVLLMCWVPVWLAWCLTVFYKSSERGFKNAWHERKWLSSLGLSVVFYLNPIKVVGNFASPESASWDLTSEMCFSVAAVFWWYVSVSPAG 662
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Match: D8LEN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN4_ECTSI) HSP 1 Score: 506 bits (1302), Expect = 4.730e-159 Identity = 298/534 (55.81%), Postives = 332/534 (62.17%), Query Frame = 1
Query: 511 MEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAMGPGSGEGAAELCARRSSSTATVTTSRGEGDLF--IIGADGPDPHSASAAGCTVFSPGLSELSLDSPLLLSSSPTSSSLTDAEERYGAVFSGQFSGMMDLFGIVSLHVSFADTEVQESLPDPTSVDIALEACVAGVTAAVGESSSQADVEWGTCEEGWLPVLFQENISARVRRLPESRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYESGATTEWAKIVLAVVLMCWVPVWLAWCLTVFYKSSEGGFKNALHERKWLASLGLSVVFYLNPIKVVGNFASPESASWGLASEMCFSVAVVMFLVVGLCIAGGVARDRVG*GLLGFYVPKA----------------------------------------------AAARIFIVRVWVVWMLFRMYTSGRLLRKLPYVPNRFRQLSYRFFGLQALLLSIVYVMFMLWRLIDTLNDDAGEQSLAAQLMLSVKTRQ 1968
MEVMPAALVISLL LTYLVFA V LIV FHLRGT+TL MGPG+G GA + G +F + G DGP A + +S+ P S R+G V CVAGVTA VGESS+QA++EWGTCE GW PVLFQENISARVR LPE+R Y LFNF+QNQDTI GQALVRQYRVQV FVSTT SSSSTG SSGSAE SFSWV EA+WSLEYE+GATTEWAKI+LAVVL+CW+PVWLAWC VFY+S+EGGFKNALHER+WL +GLSVV YLNPIKVVGNF +P SASWGLASEM SVA M LVV LCIA GV RDRVG G LGFY+ K A+ARIF+V +W VWML RMY SG LLRKLPYVPNR++QLSYRFFGLQA+LL IVY F LWRLID L+DD + AAQLML V+TRQ
Sbjct: 1 MEVMPAALVISLLVLTYLVFACGVVLIVRFHLRGTSTLTMGPGAGNGAGAV----------------RGGVFRPVFGHDGPIRERIPAR----------IICRHRGTRVSARPGHSG-----HRFGGV------------------------------------------CVAGVTAEVGESSTQAELEWGTCEGGWQPVLFQENISARVRSLPENRAYALFNFHQNQDTIRGQALVRQYRVQVDFVSTTTSSSSTGDSSGSAERSFSWVREARWSLEYETGATTEWAKIILAVVLLCWLPVWLAWCWAVFYRSAEGGFKNALHERRWLELIGLSVVLYLNPIKVVGNFVAPGSASWGLASEMSLSVAEAMLLVVTLCIADGVGRDRVGGGSLGFYLLKVVFGVWTMACMLLVDRASFPTVIGIDRGSLLAVQNWPESQQQAFELVASARIFMVMLWAVWMLCRMYVSGCLLRKLPYVPNRYQQLSYRFFGLQAILLGIVYTTFTLWRLIDILDDDMDGNTFAAQLMLFVRTRQ 461
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Match: A0A6H5JIC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC3_9PHAE) HSP 1 Score: 279 bits (714), Expect = 5.040e-78 Identity = 212/556 (38.13%), Postives = 289/556 (51.98%), Query Frame = 1
Query: 406 IIQRLPGLKLLMQVLGEEIDPKNVRHTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAM------------GPGSGEGAAELCARRSSSTATVTTSRGEGDLFIIGADGPDPH-SASAAGCTVFSPGLSELSLDSPLLLSSSPTSSSLTDAEE----RYGAVFSGQFSGMMDLFGIVSLHVSFADTE---VQESLPDPTSVDIALEACVAGVTAAVGESSSQADVEWGTCEEGWLPVLFQENI--SARVRRLPESRGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYESGATTEWAKIVLAVVLMCWVPVWLAWCLTVFYKSSEGGFKNA--LHERKWLASLGLSVVFYLNPIKVVGNF-ASPESASWGLASEMCFSVAVVMFLVVGLCIAGGVAR----DRVG*GLLGFYVPKAA---AARIFIVRV---------------------W-----VVWMLF-----------------RMYTSGRLLRKLPYVPNRFRQLSYRFFGLQA 1848
I +R P + +++ L EE++ +N T QS+P+IL EV+PA V SL T V+A + L++ LRG++TL++ GS GA +C ++S A GPDP +ASA+GCT SP S +S L SS E RYGAVFSG F+G+ L+G VSL +F D + ++LP+P VD+ +EAC AG A WG CE GW PVLFQE++ S+ V RGY +FNF QNQ+T+ G+A++ QYRV VGFVSTT+S+S+ S+E FS ++ A+W+L YE+ + + +A L WV L WC VF + +GGF++ E K LA +GLSV YL VGN +P SASWGLASEM S+A +FLV LC+A G++R DR + FY PK A AA +F++ V W V + L R+ ++GRLLR+LPYVP RF+QLSY FFGLQ
Sbjct: 592 IKERFPRPRQILEALQEELELQNPGLTAQSKPIILAEVLPAVAVTSLALCTLAVYAVGIALVLTGMLRGSSTLSVPWAYEDGSSISISSGSAYGAGNVCGSDATSAAAA---------------GPDPSGAASASGCTDLSP-----SAESLLSYSSXXXXXXXXXXTEQQRARYGAVFSGDFAGLTGLYGSVSLRAAFTDEATLGLVDALPEPVVVDVTVEACTAGAAGA-----------WGECEGGWQPVLFQEDVAVSSGVGLPSSDRGYEIFNFRQNQETVRGEAIIHQYRVLVGFVSTTSSTST------SSEVDFSGLTTARWTLTYETRGAGRGSGVAVACALGLWVAGCLWWCHAVFRR--QGGFEDGGPQFEHKCLAFVGLSVALYL-----VGNLRGAPGSASWGLASEMLRSLAAAVFLVAALCMADGISRRGVDDRFTIAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDHGSLVAMNNWPHAQQVAFALVAVAEMAXXXXXXXXXXXRITSAGRLLRQLPYVPTRFQQLSYTFFGLQV 1103
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Match: D8LRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA0_ECTSI) HSP 1 Score: 267 bits (682), Expect = 6.310e-73 Identity = 200/580 (34.48%), Postives = 277/580 (47.76%), Query Frame = 1
Query: 406 IIQRLPGLKLLMQVLGEEIDPKNVRHTTQSEPVILMEVMPAALVISLLALTYLVFASSVFLIVWFHLRGTTTLAMGPGSGEGAAELCARRSSSTATVTTSRGEGDLFIIGADGPDPHSASAAGCTVFSPGLSELSLDSPLLLSSSPTSSSLTDAEERYGAVFSGQFSGMMDLFGIVSLHVSFAD---TEVQESLPDPTSVDIALEACVAGVTAAVGESSSQADVEWGTCEEGWLPVLFQENISARVR-RLPES-RGYTLFNFYQNQDTIWGQALVRQYRVQVGFVSTTASSSSTGGSSGSAEESFSWVSEAKWSLEYESGATTEWAKIVLAVVLMCWVPVWLAWCLTVFYKSSEGGFKNA--LHERKWLASLGLSVVFYLNPIKVVGNF-ASPESASWGLASEMCFSVAVVMFLVVGLCIAGGVAR----DRVG*GLLGFYVPKAA----------------------------------------------AARIFIVRVWVVWMLFRMYTSGRLLRKLPYVPNRFRQLSYRFFGLQALLLSIVYVMFMLWRLIDTLNDDAGEQSLAAQLMLSV-KTRQ 1968
I +RLP + +++ L EE++ +N T QS+P+IL EV+PA V SL T V+A + L++ L G++T SS+ RY AVFSG F+G+ L+G VSL +F D + ++LP+P VD+ +EAC AG A WG CE GW PVLFQE++S LP S RGY +FNF QNQ+T+ G+A+++QYRV VGFVSTT+S+S+ S+E FS ++ A+W+L YE+ + + +A L WV WL+WC VF + EGGF++ E K LA GLSV YL VG+ +P SASWGLASEM S+A +FLV LC+A G+ R +R + FY PK A A + ++ +W R+ ++GRLLR+LPYVP RF+QLSY FFGLQ L L +V+ + L RL L+ D G S+ A+ +L V TRQ
Sbjct: 419 ITERLPRPRQILEALQEELELRNPGLTAQSKPIILAEVLPAVAVTSLALWTLAVYAVGIALVLTGMLPGSST----------------------------------------------------------------------------SSIPWQRARYAAVFSGDFAGLAGLYGSVSLRAAFTDEATVALVDALPEPAVVDLMVEACTAGAAGA-----------WGECEGGWQPVLFQEDVSVSSGVGLPLSDRGYEIFNFRQNQETVRGEAIIQQYRVLVGFVSTTSSTST------SSEADFSGLTTARWTLTYETRGAGRGSGVAMACALGLWVVGWLSWCHAVF-RRREGGFEDGGPHFEHKCLAFAGLSVALYL-----VGSLRGAPGSASWGLASEMMRSLAAAVFLVAALCMADGIPRRSVDNRFTIAIARFYAPKVALGVAALMFMLLVDLALFPSLAGWDHGSLVAMDNWPHAQLVAFTLVAVAEMVLMAMWXXXXXXRITSAGRLLRQLPYVPTRFQQLSYTFFGLQVLFLVLVFAVLALARLARILDTDLGGNSVGAEFLLFVVNTRQ 899 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig830.19655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig830.19655.1 >prot_Ecto-sp13_S_contig830.19655.1 ID=prot_Ecto-sp13_S_contig830.19655.1|Name=mRNA_Ecto-sp13_S_contig830.19655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=558bp MPFMLGMLQNAQDQAASPPVSPRNSRCPGGGSLVAGTGDDESCAAADISDback to top mRNA from alignment at Ecto-sp13_S_contig830:852..6827- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig830.19655.1 ID=mRNA_Ecto-sp13_S_contig830.19655.1|Name=mRNA_Ecto-sp13_S_contig830.19655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5976bp|location=Sequence derived from alignment at Ecto-sp13_S_contig830:852..6827- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig830:852..6827- >mRNA_Ecto-sp13_S_contig830.19655.1 ID=mRNA_Ecto-sp13_S_contig830.19655.1|Name=mRNA_Ecto-sp13_S_contig830.19655.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1674bp|location=Sequence derived from alignment at Ecto-sp13_S_contig830:852..6827- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |