prot_Ecto-sp13_S_contig8298.19648.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8298.19648.1
Unique Name	prot_Ecto-sp13_S_contig8298.19648.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	730

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8298.19648.1 vs. uniprot
Match: D7G6D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6D4_ECTSI)

HSP 1 Score: 1305 bits (3376), Expect = 0.000e+0
Identity = 672/721 (93.20%), Postives = 688/721 (95.42%), Query Frame = 0

Query:    1 MSGSASTAMDDYLQRFGISNENGNDSDDSSIAGQRGEPSSHQSADAVAGLAETSFWSTVFADTSRPVPNTVLGRWWHEQQPIVTRFVHEYGAVLVRFLTPFMPRAARRAGYCCGCRALLRSLDRIDLELPGGEGGWSPRWRSRRCDCGDRRSGLTEGISSVCAAVGGAGVTAVIIMVAAAVSWCSWRRSSPSWLLLLGEVAIGSAGVAHYLARDDGHAEAKVLEAHLRALERSLSPFFRGVHACMRMVKCSQTLSFGLRLSVPMPPVARMEGRLPATGSGGLPGRAEVALRDLRSVVMDVLEGGVEQVNVLQLKERCGDTDGFLESGGQASDSGGRQSMQSLADLAGTERRLVVDLRRFLAIVAARVEGVMLGPETWGLWWDSQLVDVSEALAEVARYFEAASGKLETAIGCGGLPFSPSGSTSANGEMTAAAEAISSLRLHYEEIVVRLYSCQSNASSLLRDPSKSAADAWEAVRQGLAEARLSTGPLNCDQNLWQKAEDLVETMAKEVTATGAVSESGKSPSSENNNPDPSRHLEAGTGWVSLASPKGEGPRVFEGGSGDHPRKDDASSMPDTGITDVHVGVPSPIRSRYERQEGAASRPTPEEIVGEDSRELLVSELDSVLRARPLPPTCEKRLPLVSQQSIDSEDGSDTPEEQSTERPLGVATPPMGSALPIGSQNLMSELRAQLSGAMNEEFFSSDRLPCPITSDAEEGSVVEGER 721
            MSGSASTAMD +LQRFG SNENGNDSDDSS AGQR + SSHQSA AVAGLAETSFWSTVFADTSRP+PNTVLGRWWHEQQPIVTRFVH+YGAVLVRFLTPF PRAARRAGYCCGCRALLRSLDRIDLELPGGEGGWS RWRSRRC+CGDRRS LTEGISSVCAAVGGAGV AVIIMVAAAVSWCSWRRSSPSWLLLLGEVAIGSAGVAHYLARDDGHAEAKVLEAHL ALERSL PFFRGVHACMRMVKCSQTLSFGLRLS+PMPPVARMEGRLPATGSGGLPGRAE ALRDLRSVVMDVLEGGVEQ NVLQLKERCGDTDGFLESGGQASDSGGRQSMQSL+DLAGTERRLVVDLRRFLAIVAARVEGVM+ PE WGLWWDSQLVDVSEALAE+ARYFEAASGKLETAIGCGGLPF PSGSTSA+GEMTAAAEAISSLRLHYEEIVVR+YSCQSNASSLLRDPSKSAADAWEAVRQGL+EARLSTGPLNCDQNLWQKAEDLVETMA EV  TGA  +SGKSPSSENNNPDPSRHLEAGTGWVSLA+PK EGPRVFEGGSGDHP KDDASS PDTGITDVHVGVPSP+RSR ERQEGAASRPTPEEIVGEDS ELLVSELDSVLRARPLPPTCEKRLPLVSQQSIDSEDGSDTPEEQS E PLGVATPP  SALPIGSQNLMSELRAQLSGAMNEEFFSSDRLPCP TSDAEEG VVEGE+
Sbjct:   34 MSGSASTAMDAHLQRFGTSNENGNDSDDSSSAGQREDTSSHQSAAAVAGLAETSFWSTVFADTSRPLPNTVLGRWWHEQQPIVTRFVHDYGAVLVRFLTPFTPRAARRAGYCCGCRALLRSLDRIDLELPGGEGGWSSRWRSRRCECGDRRSALTEGISSVCAAVGGAGVAAVIIMVAAAVSWCSWRRSSPSWLLLLGEVAIGSAGVAHYLARDDGHAEAKVLEAHLVALERSLGPFFRGVHACMRMVKCSQTLSFGLRLSIPMPPVARMEGRLPATGSGGLPGRAEAALRDLRSVVMDVLEGGVEQANVLQLKERCGDTDGFLESGGQASDSGGRQSMQSLSDLAGTERRLVVDLRRFLAIVAARVEGVMVEPEMWGLWWDSQLVDVSEALAELARYFEAASGKLETAIGCGGLPFPPSGSTSASGEMTAAAEAISSLRLHYEEIVVRIYSCQSNASSLLRDPSKSAADAWEAVRQGLSEARLSTGPLNCDQNLWQKAEDLVETMANEVDETGAALKSGKSPSSENNNPDPSRHLEAGTGWVSLATPKEEGPRVFEGGSGDHPSKDDASSTPDTGITDVHVGVPSPVRSRCERQEGAASRPTPEEIVGEDSHELLVSELDSVLRARPLPPTCEKRLPLVSQQSIDSEDGSDTPEEQSKEWPLGVATPPTESALPIGSQNLMSELRAQLSGAMNEEFFSSDRLPCPETSDAEEGGVVEGEK 754

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8298.19648.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8298.19648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G6D4_ECTSI	0.000e+0	93.20	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 182..192
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..156
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 157..181
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 213..729
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 193..212
None	No IPR available	TMHMM	TMhelix		coord: 164..186
None	No IPR available	TMHMM	TMhelix		coord: 193..212

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8298	contig	Ecto-sp13_S_contig8298:2226..5928 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8298.19648.1	mRNA_Ecto-sp13_S_contig8298.19648.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8298 1566..6040 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8298.19648.1 ID=prot_Ecto-sp13_S_contig8298.19648.1|Name=mRNA_Ecto-sp13_S_contig8298.19648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=730bp
MSGSASTAMDDYLQRFGISNENGNDSDDSSIAGQRGEPSSHQSADAVAGL
AETSFWSTVFADTSRPVPNTVLGRWWHEQQPIVTRFVHEYGAVLVRFLTP
FMPRAARRAGYCCGCRALLRSLDRIDLELPGGEGGWSPRWRSRRCDCGDR
RSGLTEGISSVCAAVGGAGVTAVIIMVAAAVSWCSWRRSSPSWLLLLGEV
AIGSAGVAHYLARDDGHAEAKVLEAHLRALERSLSPFFRGVHACMRMVKC
SQTLSFGLRLSVPMPPVARMEGRLPATGSGGLPGRAEVALRDLRSVVMDV
LEGGVEQVNVLQLKERCGDTDGFLESGGQASDSGGRQSMQSLADLAGTER
RLVVDLRRFLAIVAARVEGVMLGPETWGLWWDSQLVDVSEALAEVARYFE
AASGKLETAIGCGGLPFSPSGSTSANGEMTAAAEAISSLRLHYEEIVVRL
YSCQSNASSLLRDPSKSAADAWEAVRQGLAEARLSTGPLNCDQNLWQKAE
DLVETMAKEVTATGAVSESGKSPSSENNNPDPSRHLEAGTGWVSLASPKG
EGPRVFEGGSGDHPRKDDASSMPDTGITDVHVGVPSPIRSRYERQEGAAS
RPTPEEIVGEDSRELLVSELDSVLRARPLPPTCEKRLPLVSQQSIDSEDG
SDTPEEQSTERPLGVATPPMGSALPIGSQNLMSELRAQLSGAMNEEFFSS
DRLPCPITSDAEEGSVVEGERQKQREEDP*