mRNA_Ecto-sp13_S_contig8291.19640.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A6H5KZU9_9PHAE (Protein O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZU9_9PHAE) HSP 1 Score: 168 bits (426), Expect = 9.510e-43 Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 1
Query: 1 SLSRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKA 249
+L RYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKA
Sbjct: 91 NLGRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKA 173
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A7S2WWR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWR9_9STRA) HSP 1 Score: 134 bits (338), Expect = 5.970e-35 Identity = 60/83 (72.29%), Postives = 72/83 (86.75%), Query Frame = 1
Query: 1 SLSRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKA 249
S RY++A +CE++Y+ A RT+NLLL+GA+HFQLRNFSECI YNQQC+R+ PNFAEAYSNLGNALKELGD GA+QFYLKA
Sbjct: 19 SSGRYREALQMCETIYQVDAFRTENLLLMGAIHFQLRNFSECIFYNQQCVRVQPNFAEAYSNLGNALKELGDCAGAVQFYLKA 101
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A835ZDI7_9STRA (Protein O-GlcNAc transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI7_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.370e-33 Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 1
Query: 4 LSRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLK 246
L Y DAQA CE++Y + A RTDNLLLLGAVHFQLRNFSECI YNQQCIR+DP FAEAYSNLGNALKELGD+ GA+QFY+K
Sbjct: 10 LGNYTDAQATCEAIYAEDAHRTDNLLLLGAVHFQLRNFSECIFYNQQCIRVDPGFAEAYSNLGNALKELGDINGAVQFYVK 90
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A7S1C5Z1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5Z1_9STRA) HSP 1 Score: 129 bits (325), Expect = 8.310e-33 Identity = 60/80 (75.00%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 1 SLSRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFY 240
+ RYKDA CE VY+ A R+DNLLLLGAVHFQLRN+SECI YNQQ IRIDPNFAEAY NLGNALKELGD+ G++QFY
Sbjct: 16 NAGRYKDAHITCEQVYQTDAYRSDNLLLLGAVHFQLRNYSECIFYNQQAIRIDPNFAEAYGNLGNALKELGDIDGSVQFY 95
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A067CJ54_SAPPC (Protein O-GlcNAc transferase (Fragment) n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ54_SAPPC) HSP 1 Score: 125 bits (314), Expect = 5.410e-28 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1
Query: 1 SLSRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKA 249
+ RYK+ ++CE +Y A RTDNLLLLGA+HFQLRNFSE I YNQQCIRI+P+FAEA+ NLGNALKE+GD+ GA+QFYL+A
Sbjct: 48 NCGRYKEGISICEHLYAADASRTDNLLLLGALHFQLRNFSESIFYNQQCIRIEPHFAEAFGNLGNALKEIGDMNGAVQFYLRA 130
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A1W0A6E6_9STRA (Protein O-GlcNAc transferase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6E6_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.500e-27 Identity = 56/80 (70.00%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 10 RYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLKA 249
+YKD +C+ +Y A RTDNLLLLGA+HFQLRNFSE I YNQQCIRI+P+FAEA+ NLGNALKE+GD+ GA+QFYL+A
Sbjct: 92 KYKDGVVICDHLYIADASRTDNLLLLGALHFQLRNFSESIFYNQQCIRIEPHFAEAFGNLGNALKEIGDINGAVQFYLRA 171
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A6A4YZ88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZ88_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.440e-27 Identity = 59/85 (69.41%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 10 RYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLG-----NALKELGDVGGAIQFYLKA 249
+YKD +CE +Y A RTDNLLLLGA+HFQLRNFSE I YNQQCIRIDP+FAEA+ NLG NALKE+GD GAIQFYL+A
Sbjct: 25 KYKDGVIVCEQLYEADAARTDNLLLLGALHFQLRNFSEAIFYNQQCIRIDPHFAEAFGNLGRNALGNALKEIGDSQGAIQFYLRA 109
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A6G0XEP2_9STRA (Protein O-GlcNAc transferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEP2_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.450e-27 Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 10 RYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYL 243
+YK+ A+CE +Y A RTDNLLLLGA+HFQLRNFSE I YNQQCIRIDP FAEA+ NLGNALKE+GD GAIQFYL
Sbjct: 43 KYKEGIAICEMLYEADAARTDNLLLLGALHFQLRNFSEAIFYNQQCIRIDPQFAEAFGNLGNALKEIGDSQGAIQFYL 120
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A3L6VR02_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VR02_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.770e-27 Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 10 RYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQF 237
+YKD +CE +Y A RTDNLLLLGA+HFQLRNFSE I YNQQCIRIDP+FAEA+ NLGNALKE+GD GAIQF
Sbjct: 48 KYKDGVIVCEQLYEADAARTDNLLLLGALHFQLRNFSEAIFYNQQCIRIDPHFAEAFGNLGNALKEIGDSQGAIQF 123
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Match: A0A482RRV3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRV3_9ARCH) HSP 1 Score: 114 bits (285), Expect = 3.940e-27 Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 13 YKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIRIDPNFAEAYSNLGNALKELGDVGGAIQFYLK 246
Y D +LC+ +Y A +TDNL+L+GA HFQLRN+SE + YNQQCI++DP+ AEA+SNLGNALKELGD+ GA QFYLK
Sbjct: 61 YTDCLSLCDKIYEFDAHKTDNLILMGAAHFQLRNYSESVFYNQQCIKVDPHCAEAFSNLGNALKELGDLKGATQFYLK 138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8291.19640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8291.19640.1 >prot_Ecto-sp13_S_contig8291.19640.1 ID=prot_Ecto-sp13_S_contig8291.19640.1|Name=mRNA_Ecto-sp13_S_contig8291.19640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp SLSRYKDAQALCESVYRQGACRTDNLLLLGAVHFQLRNFSECILYNQQCIback to top mRNA from alignment at Ecto-sp13_S_contig8291:932..6280+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8291.19640.1 ID=mRNA_Ecto-sp13_S_contig8291.19640.1|Name=mRNA_Ecto-sp13_S_contig8291.19640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5349bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8291:932..6280+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8291:932..6280+ >mRNA_Ecto-sp13_S_contig8291.19640.1 ID=mRNA_Ecto-sp13_S_contig8291.19640.1|Name=mRNA_Ecto-sp13_S_contig8291.19640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8291:932..6280+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |