prot_Ecto-sp13_S_contig82888.19636.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig82888.19636.1
Unique Nameprot_Ecto-sp13_S_contig82888.19636.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: D7FHD5_ECTSI (Putative microtubule-associated protein EB1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD5_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 4.320e-14
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ
Sbjct:   75 KVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 108          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A2H6KJ91_9APIC (Calponin homology domain-containing protein n=1 Tax=Babesia ovata TaxID=189622 RepID=A0A2H6KJ91_9APIC)

HSP 1 Score: 56.6 bits (135), Expect = 2.410e-8
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQSAF RL I KH+DVQ+LT+G+Y DNLEF+Q
Sbjct:   84 KVLQSAFTRLGISKHVDVQKLTKGRYQDNLEFLQ 117          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A1X6NKB6_PORUM (Calponin-homology (CH) domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKB6_PORUM)

HSP 1 Score: 55.1 bits (131), Expect = 3.110e-8
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQ+AF +L ID+HIDV++L RGKY DNLEF+Q
Sbjct:   75 KVLQAAFTKLSIDRHIDVEKLIRGKYQDNLEFLQ 108          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A482RNB4_9ARCH (Calponin-homology (CH) domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNB4_9ARCH)

HSP 1 Score: 53.5 bits (127), Expect = 7.590e-8
Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            ++LQ+ F +L+I+KH+DV RL  G+YMDNLEFMQ
Sbjct:   74 KILQTCFSKLNIEKHVDVDRLISGRYMDNLEFMQ 107          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A7S3YCI0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCI0_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 7.990e-8
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            ++LQ  FD++ IDKH+DVQ+L R +Y DNLEFMQ
Sbjct:   74 KILQRGFDKIGIDKHVDVQKLIRARYQDNLEFMQ 107          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: H3GGV9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGV9_PHYRM)

HSP 1 Score: 54.7 bits (130), Expect = 1.070e-7
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQ AF +L IDKH++V RL RGKY DNLEFMQ
Sbjct:   71 KVLQKAFMQLKIDKHVEVDRLVRGKYQDNLEFMQ 104          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A7S2QJ00_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QJ00_9DINO)

HSP 1 Score: 53.9 bits (128), Expect = 1.070e-7
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQ+AFD+L I+KHIDV +L R KY DNLEF+Q
Sbjct:  113 KVLQAAFDKLGIEKHIDVDKLIRAKYQDNLEFLQ 146          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A2D4C098_PYTIN (Microtubule-associated protein EB1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C098_PYTIN)

HSP 1 Score: 54.7 bits (130), Expect = 1.080e-7
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQS F +L ID+HI+V RL RGKY DNLEFMQ
Sbjct:   78 KVLQSCFTKLKIDRHIEVDRLIRGKYQDNLEFMQ 111          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A0P1A9J2_PLAHL (Microtubule associated protein eb1 n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1A9J2_PLAHL)

HSP 1 Score: 54.7 bits (130), Expect = 1.080e-7
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQ AF +L IDKH++V RL RGKY DNLEFMQ
Sbjct:   76 KVLQKAFMQLKIDKHVEVDRLVRGKYQDNLEFMQ 109          
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Match: A0A3M6VV07_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV07_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.090e-7
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ 34
            +VLQ AF +L IDKH++V RL RGKY DNLEFMQ
Sbjct:   78 KVLQKAFVQLKIDKHVEVDRLVRGKYQDNLEFMQ 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig82888.19636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHD5_ECTSI4.320e-1497.06Putative microtubule-associated protein EB1 n=2 Ta... [more]
A0A2H6KJ91_9APIC2.410e-870.59Calponin homology domain-containing protein n=1 Ta... [more]
A0A1X6NKB6_PORUM3.110e-867.65Calponin-homology (CH) domain-containing protein (... [more]
A0A482RNB4_9ARCH7.590e-861.76Calponin-homology (CH) domain-containing protein n... [more]
A0A7S3YCI0_HETAK7.990e-861.76Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
H3GGV9_PHYRM1.070e-770.59Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S2QJ00_9DINO1.070e-767.65Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A2D4C098_PYTIN1.080e-770.59Microtubule-associated protein EB1 n=1 Tax=Pythium... [more]
A0A0P1A9J2_PLAHL1.080e-770.59Microtubule associated protein eb1 n=2 Tax=Peronos... [more]
A0A3M6VV07_9STRA1.090e-770.59Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 1..34
e-value: 8.8E-9
score: 37.5
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 2..34
IPR027328Microtubule-associated protein RP/EBPANTHERPTHR10623MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBERcoord: 2..34
NoneNo IPR availablePANTHERPTHR10623:SF6EB1, ISOFORM F-RELATEDcoord: 2..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig82888contigEcto-sp13_S_contig82888:132..233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig82888.19636.1mRNA_Ecto-sp13_S_contig82888.19636.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig82888 132..233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig82888.19636.1 ID=prot_Ecto-sp13_S_contig82888.19636.1|Name=mRNA_Ecto-sp13_S_contig82888.19636.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
QVLQSAFDRLHIDKHIDVQRLTRGKYMDNLEFMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036872CH_dom_sf
IPR027328MAPRE