prot_Ecto-sp13_S_contig82886.19635.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig82886.19635.1
Unique Nameprot_Ecto-sp13_S_contig82886.19635.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig82886.19635.1 vs. uniprot
Match: D8LIJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ6_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.180e-28
Identity = 61/78 (78.21%), Postives = 65/78 (83.33%), Query Frame = 0 
Query:    1 GNGGGKSGLKSKLCSVAIDYDDGDTEERVPRVRVRLVGQKQPRFLNEGDEVDVKRGKKIRLARVVARPSSSPNIEGQY 78
            GN    SGLKSKLCSVAIDYDDGDTEERVPRVRVRLVGQKQPRFLNEGDEVDVKRGKKIR  R   R +S+   +GQ+
Sbjct: 2338 GNXXXNSGLKSKLCSVAIDYDDGDTEERVPRVRVRLVGQKQPRFLNEGDEVDVKRGKKIRSTR---RLNSAATPDGQF 2412
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig82886.19635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIJ6_ECTSI1.180e-2878.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig82886contigEcto-sp13_S_contig82886:188..460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig82886.19635.1mRNA_Ecto-sp13_S_contig82886.19635.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig82886 188..462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig82886.19635.1 ID=prot_Ecto-sp13_S_contig82886.19635.1|Name=mRNA_Ecto-sp13_S_contig82886.19635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
GNGGGKSGLKSKLCSVAIDYDDGDTEERVPRVRVRLVGQKQPRFLNEGDE
VDVKRGKKIRLARVVARPSSSPNIEGQYDLELLGEDGQRTS
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