mRNA_Ecto-sp13_S_contig8288.19634.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: D7G3C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C3_ECTSI) HSP 1 Score: 337 bits (865), Expect = 2.530e-111 Identity = 202/240 (84.17%), Postives = 204/240 (85.00%), Query Frame = 1
Query: 76 VGFMFDNALPKTRRSFQFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHPELGGSAAAAKSRCVQLSWGTVGNVQRASLANALSSVTASSPSRPSRDEALVRTRNTAE-VGRSTSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDSSGDGGVLFDLVIASDVIYSVSVVEP 792
VGFMFDNALPKTRRSF+FGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLT AVVFTDHDPGVLDMIR SIEEQQQ PELGGSAAAAKSRCVQLSWGTVGN QRASLA+ALSSV ASS RP RDEALVRTRN AE VG STS SG XXXXXXXXXXXX S G GGVLFDLVIASDVIYSVSVVEP
Sbjct: 6 VGFMFDNALPKTRRSFRFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTKAVVFTDHDPGVLDMIRESIEEQQQQPELGGSAAAAKSRCVQLSWGTVGNAQRASLAHALSSVAASSTPRPRRDEALVRTRNLAEEVGGSTSRSGPGRGSGAGLSRGRIDGARGXXXXXXXXXXXXXXXSGG-GGVLFDLVIASDVIYSVSVVEP 244
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: A0A6H5KXF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF9_9PHAE) HSP 1 Score: 335 bits (858), Expect = 1.560e-110 Identity = 197/237 (83.12%), Postives = 199/237 (83.97%), Query Frame = 1
Query: 85 MFDNALPKTRRSFQFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHPELGGSAAAAKSRCVQLSWGTVGNVQRASLANALSSVTASSPSRPSRDEALVRTRNTAE-VGRSTSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDSSGDGGVLFDLVIASDVIYSVSVVEP 792
MFDNALPKTRRSF+FGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIR SIEEQQQ PELGGSAAAAKSRCVQLSWG+VGN QRASLANALSSV ASSP RPSRDEALVRTRN AE VG STSG XXX XXXXXXXX GVLFDLVIASDVIYSVSVVEP
Sbjct: 1 MFDNALPKTRRSFRFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRESIEEQQQQPELGGSAAAAKSRCVQLSWGSVGNAQRASLANALSSVAASSPPRPSRDEALVRTRNLAEEVGGSTSGGAPXXXSGDGLSRRRVDGERSDRSDXXXXXXXXXXXXXXXXGVLFDLVIASDVIYSVSVVEP 237
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: A0A836CF84_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF84_9STRA) HSP 1 Score: 150 bits (379), Expect = 9.210e-41 Identity = 75/136 (55.15%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 67 FGDVGFMFDNALPKTRRSFQFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHPELGGSAAAAKSRCVQLSWGTV 474
+ ++GFMFD LP+T+R+F FG IS ++ VDD+PGAVQSGHY+WPA+P L++YLV++R ++P G LELGAGCGLAGL AAQL +AVVFTDHD GV+++++ +IE +Q GSA A LSWG V
Sbjct: 2 YAELGFMFDTGLPRTQRTFTFGPISTTLQFVDDEPGAVQSGHYLWPASPCLASYLVEQRESIPAGS-VLELGAGCGLAGLTAAQLTGVSAVVFTDHDFGVIELLQENIEHLRQ----AGSAKAGVLAAQSLSWGEV 132
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: A0A1W0A5U5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5U5_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.370e-35 Identity = 74/145 (51.03%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 43 ADSSDDGCFGDVGFMFDNALPKTRRSFQFGDISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHPELGGSAAAAKSRCVQLSWGTVG 477
+D SDD DVGFMFD+ + K F++G +SV + V+D+PG VQSGHYVWPAAPAL Y+ +LPRG +ELGAGCGLAGLV AQL ++ ++FTDHDPGVL I +++ Q H E AK L WG+VG
Sbjct: 22 SDGSDDELLTDVGFMFDDRMEKVTCEFKYGRVSVLLSYVEDNPGFVQSGHYVWPAAPALCEYMEANFASLPRG-HVVELGAGCGLAGLVFAQLDPSSQIIFTDHDPGVLKTIEHNVK-MQSHREQ------AKCYTQSLRWGSVG 158
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: A0A067D2D9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2D9_SAPPC) HSP 1 Score: 126 bits (316), Expect = 2.020e-31 Identity = 73/152 (48.03%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 43 ADSSDDGCFGDVGFMFDNALPKTRRSFQFGD-------ISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHPELGGSAAAAKSRCVQLSWGTVG 477
+D SD+ DVGFMFD+ L K F +G +SV + V D+PG VQSGHYVWPAAPAL Y+V +LPRG LELGAGCGLAGLV AQL + ++FTDHDPGVL I ++ Q A A L WG G
Sbjct: 25 SDGSDEDLLTDVGFMFDDCLEKVTCEFTYGTSSSGAPRVSVMLSYVQDNPGFVQSGHYVWPAAPALCEYMVSNFESLPRGN-VLELGAGCGLAGLVFAQLDPASRIIFTDHDPGVLKTIEHNVTMQTHR-------AQATCHTQSLRWGPEG 168
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: M4B4Y3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4Y3_HYAAE) HSP 1 Score: 125 bits (313), Expect = 3.800e-31 Identity = 61/125 (48.80%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 46 DSSDDGCFGDVGFMFDNALPKTRRSFQFG-----DISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQ 405
D +G DVGFMFD L K + +G D+SV + D+PGA+QSGHYVWPAAPAL YLV + + +G + +ELGAGCGL GL AQL V FTDHDPGVL +I ++ +Q++
Sbjct: 4 DDGTEGMLTDVGFMFDACLEKVTCRYDYGENGGDDVSVLLTYTKDEPGALQSGHYVWPAAPALCQYLVTHQEIISKGAKVVELGAGCGLTGLAVAQLQPDAIVTFTDHDPGVLKVIEHNVRQQER 128
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: W4G5T8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5T8_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.400e-31 Identity = 70/151 (46.36%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 52 SDDGCFGDVGFMFDNALPKTRRSFQFG---------DISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHPELGGSAAAAKSRCVQLSWGTVG 477
+D+ DVGFM+D+ L K F +G +SV + V DDPG VQSGHYVWPAAPAL Y+V LPRG +ELGAGCGLAGLV AQL ++ ++FTDHDPGVL I ++ +Q P+ A+ L WG G
Sbjct: 38 ADEDLLADVGFMYDDCLEKVTCEFTYGVTSDTDPTPRVSVFLSYVQDDPGFVQSGHYVWPAAPALCEYMVAHFKELPRGN-IVELGAGCGLAGLVFAQLDPSSTIIFTDHDPGVLKTIEHNVTKQSHRPKQ------ARCHTQSLRWGPQG 181
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: A0A6G0XQM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQM1_9STRA) HSP 1 Score: 125 bits (313), Expect = 9.260e-31 Identity = 65/137 (47.45%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 40 DADSSDDGCFGDVGFMFDNALPKTRRSFQFGD------------ISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHPE 414
D + +D D+GFM+D+ L K F +G +SV + V D+PG VQSGHYVWPAAPAL AY+ + LPRG +ELGAGCGLAGLV AQL ++ V+FTDHDPGVL I+ ++ +Q P+
Sbjct: 28 DNTTEEDDLMADIGFMYDDCLEKVTCEFTYGSTVNPASGAVEPRVSVLLSYVQDEPGFVQSGHYVWPAAPALCAYMEENFDQLPRGN-IVELGAGCGLAGLVFAQLDPSSTVIFTDHDPGVLKTIQHNVSKQAHRPQ 163
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: A0A662XQW1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQW1_9STRA) HSP 1 Score: 124 bits (311), Expect = 9.540e-31 Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 40 DADSSDDGCFGDVGFMFDNALPKTRRSFQFG-DISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQ 405
D + ++G DVGFMFD L K F +G D+SV + ++PGA+QSGHYVWPAAPAL YL R +P GG +ELGAGCGL GL AQL V+FTDHDPGVL +I + +Q++
Sbjct: 19 DMEDGNEGMLTDVGFMFDACLEKVTCRFDYGADVSVLLTYATEEPGALQSGHYVWPAAPALCEYLESHRELIP-GGNVVELGAGCGLTGLAIAQLRPDATVIFTDHDPGVLKVIEHNAGQQER 140
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Match: A0A024UA67_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA67_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.740e-30 Identity = 66/133 (49.62%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 40 DADSSDDGCFGDVGFMFDNALPKTRRSFQFG---------DISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRGSIEEQQQHP 411
D +D+ DVGFM+D+ L K F FG +SV + V DDPG VQSGHYVWPAAPAL Y+ LPRG +ELGAGCGLAGLV AQL ++ ++FTDHDPGVL I ++ +Q P
Sbjct: 31 DDQEADEDLLADVGFMYDDCLEKVTCEFTFGVTSDSDPTPRVSVFLSYVQDDPGFVQSGHYVWPAAPALCEYMEAHFKELPRGN-VVELGAGCGLAGLVFAQLDPSSTIIFTDHDPGVLKTIEHNVTKQSHRP 162 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8288.19634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8288.19634.1 >prot_Ecto-sp13_S_contig8288.19634.1 ID=prot_Ecto-sp13_S_contig8288.19634.1|Name=mRNA_Ecto-sp13_S_contig8288.19634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp MKGGMAEGECTHADADSSDDGCFGDVGFMFDNALPKTRRSFQFGDISVAVback to top mRNA from alignment at Ecto-sp13_S_contig8288:2521..6957+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8288.19634.1 ID=mRNA_Ecto-sp13_S_contig8288.19634.1|Name=mRNA_Ecto-sp13_S_contig8288.19634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4437bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8288:2521..6957+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8288:2521..6957+ >mRNA_Ecto-sp13_S_contig8288.19634.1 ID=mRNA_Ecto-sp13_S_contig8288.19634.1|Name=mRNA_Ecto-sp13_S_contig8288.19634.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=792bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8288:2521..6957+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |