mRNA_Ecto-sp13_S_contig8283.19630.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: D8LI71_ECTSI (ARL2, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI71_ECTSI) HSP 1 Score: 231 bits (590), Expect = 4.470e-76 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE
Sbjct: 1 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 113
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: A0A7S2CN96_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN96_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.180e-67 Identity = 100/114 (87.72%), Postives = 111/114 (97.37%), Query Frame = 1
Query: 1 SMGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
+MGLLSILKKVKQKEKEVRLLILGLDNAGKTTI+KKFNG+DI+ IEPTLGFNIKT+EYKG++LNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDS+DR R++DCKRELH+LL QE
Sbjct: 13 TMGLLSILKKVKQKEKEVRLLILGLDNAGKTTILKKFNGEDISTIEPTLGFNIKTLEYKGFKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSSDRWRMEDCKRELHNLLDQE 126
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: A0A835YQ34_9STRA (ARL2, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ34_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.380e-65 Identity = 97/113 (85.84%), Postives = 106/113 (93.81%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLLSILKKVK+KE+EVRLLILGLDNAGKTTIVKKFNG+DI I PTLGFNI T+E+KG++LNVWDVGGQQTIRSYWRNYFEQTDG+IWVVDSADR RLQDC+RELH LL QE
Sbjct: 1 MGLLSILKKVKEKEREVRLLILGLDNAGKTTIVKKFNGEDITTISPTLGFNINTLEHKGFKLNVWDVGGQQTIRSYWRNYFEQTDGIIWVVDSADRARLQDCRRELHALLDQE 113
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: A0A2P2IDN2_9CRUS (ADP-ribosylation factor-like protein 2 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IDN2_9CRUS) HSP 1 Score: 199 bits (507), Expect = 2.280e-63 Identity = 92/114 (80.70%), Postives = 107/114 (93.86%), Query Frame = 1
Query: 1 SMGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
+MG L+ILKKVKQKEKE+R+L+LGLDNAGKTTIVK+FNG+DI+ I PTLGF IKT+EY+GY+LN+WDVGGQQTIRSYWRNYFEQTDGL+WVVDSADR RL+DCKRELH LL +E
Sbjct: 12 AMGFLTILKKVKQKEKEMRILMLGLDNAGKTTIVKRFNGEDIDTISPTLGFKIKTLEYEGYKLNIWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRWRLEDCKRELHGLLKEE 125
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: W7T532_9STRA (Adp-ribosylation factor-like protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T532_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.330e-62 Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLLSILKKVK+KEKE+RLLILGLDNAGKTTI+KKFNG++I+ IEPTLGFNIKT+EY+GY LNVWDVGGQQTIRSYWRNYFE TDGLIWVVDSADR RL+ C++ELH LL QE
Sbjct: 1 MGLLSILKKVKRKEKEMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLEYQGYLLNVWDVGGQQTIRSYWRNYFEATDGLIWVVDSADRRRLEVCRQELHALLQQE 113
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: A0A0U2LGE6_CALSV (ADP-ribosylation factor-like protein 2 n=1 Tax=Calanus sinicus TaxID=114070 RepID=A0A0U2LGE6_CALSV) HSP 1 Score: 196 bits (497), Expect = 6.050e-62 Identity = 89/113 (78.76%), Postives = 107/113 (94.69%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLLSILKK+K+KEKEVRLL+LGLDNAGKTTI+KKFNG+DIN I PTLGFNIKT++++G++LN+WDVGGQ+++RSYWRNYFE TDGLIWVVDSAD+ RL+DCK ELH LLG+E
Sbjct: 1 MGLLSILKKLKEKEKEVRLLMLGLDNAGKTTILKKFNGEDINEIAPTLGFNIKTLDHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADKRRLEDCKNELHSLLGEE 113
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: V3ZG06_LOTGI (ADP-ribosylation factor-like protein 2 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZG06_LOTGI) HSP 1 Score: 195 bits (496), Expect = 8.590e-62 Identity = 92/113 (81.42%), Postives = 107/113 (94.69%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLL+ILKK+KQKEKEVRLL+LGLDNAGKTTI+KKFNG+DIN I PTLGFNIKT+E++G++LNVWDVGGQ+++RSYWRNYFE TDGLIWVVDSADR RLQDCK+ELH LL +E
Sbjct: 1 MGLLTILKKMKQKEKEVRLLMLGLDNAGKTTILKKFNGEDINTISPTLGFNIKTLEHRGFKLNVWDVGGQRSLRSYWRNYFECTDGLIWVVDSADRMRLQDCKQELHSLLLEE 113
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: A0A5A8DKS8_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKS8_CAFRO) HSP 1 Score: 195 bits (496), Expect = 9.160e-62 Identity = 91/113 (80.53%), Postives = 105/113 (92.92%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLL+ILKK+KQKEKE+RLLILGLDNAGKTTI+KKFNG+DI+ I PTLGFNIKT+EY GY+LNVWDVGGQ+T+RSYWRNY+E+TDG+IWVVDSADR RL+DCK E LLGQE
Sbjct: 1 MGLLTILKKLKQKEKEIRLLILGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEYDGYKLNVWDVGGQKTLRSYWRNYYEETDGVIWVVDSADRRRLRDCKEEFGKLLGQE 113
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: A0A1S3HT30_LINUN (ADP-ribosylation factor-like protein 2 n=6 Tax=Bilateria TaxID=33213 RepID=A0A1S3HT30_LINUN) HSP 1 Score: 194 bits (494), Expect = 1.730e-61 Identity = 90/113 (79.65%), Postives = 105/113 (92.92%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLL+ILKK+KQKEKEVRLL+LGLDNAGKTTI+KKFNG+DIN I PTLGFNIKT+E++G++LN+WDVGGQ+++RSYWRNYFE TDGLIWVVDSADR RL DCK ELH LL +E
Sbjct: 1 MGLLTILKKMKQKEKEVRLLMLGLDNAGKTTILKKFNGEDINTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRRRLSDCKEELHQLLVEE 113
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Match: Q22YY0_TETTS (ADP-ribosylation factor(Arf)/Arf-like (ARL) small GTPase family protein n=2 Tax=Hymenostomatida TaxID=31277 RepID=Q22YY0_TETTS) HSP 1 Score: 194 bits (493), Expect = 2.460e-61 Identity = 92/113 (81.42%), Postives = 103/113 (91.15%), Query Frame = 1
Query: 4 MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQE 342
MGLL ILKK K+KEKE+RLLILGLDNAGKTTI+KKFNG+DI+ I PTLGFNIKT+ Y+ Y+LNVWDVGGQ TIRSYWRNYFEQTDGLIWVVDS+D+ RL+DCKRELH LL QE
Sbjct: 1 MGLLKILKKTKEKEKEMRLLILGLDNAGKTTILKKFNGEDIDKISPTLGFNIKTLHYQDYKLNVWDVGGQTTIRSYWRNYFEQTDGLIWVVDSSDKMRLEDCKRELHSLLKQE 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8283.19630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8283.19630.1 >prot_Ecto-sp13_S_contig8283.19630.1 ID=prot_Ecto-sp13_S_contig8283.19630.1|Name=mRNA_Ecto-sp13_S_contig8283.19630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp MGLLSILKKVKQKEKEVRLLILGLDNAGKTTIVKKFNGDDINAIEPTLGFback to top mRNA from alignment at Ecto-sp13_S_contig8283:4904..6400+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8283.19630.1 ID=mRNA_Ecto-sp13_S_contig8283.19630.1|Name=mRNA_Ecto-sp13_S_contig8283.19630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1497bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8283:4904..6400+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8283:4904..6400+ >mRNA_Ecto-sp13_S_contig8283.19630.1 ID=mRNA_Ecto-sp13_S_contig8283.19630.1|Name=mRNA_Ecto-sp13_S_contig8283.19630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=339bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8283:4904..6400+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |