mRNA_Ecto-sp13_S_contig8283.19629.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: D8LI72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI72_ECTSI) HSP 1 Score: 839 bits (2167), Expect = 7.340e-303 Identity = 441/561 (78.61%), Postives = 451/561 (80.39%), Query Frame = 3
Query: 6 MERNRVAGRKRARPTPSLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLLGAAGEESADWAERSAADTKGEAERAIAAGGLASKDLVEGSPGAARSRRFPGEVVVDGSAPISEESDTREEADGGXXGSNASEEVHGLGRLTELFDPDGEDRLLARKFASVVGRIGREGRQKVAWADHCASLPRHLATREEVKSSVRSVEAFLRSLLEGGTAATSSSSSSSVNWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEGKAGYGGGLQVCYEDGLEPAKG 1688
MER RVAGRKRARPTPSLRCYIVDDH DALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLA+TEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVK TGKLRVSSTAPYFVDDRLYCREEDM ECKPLHLCVSLVPDNL SPAECLTGAEL+ DYFTTENPFILELEDH+GKRDAAVVRDFY RPRFRGAATPLPHETQLEHE IFKTEVDRLLGAAGEESA+ AE+ AADTKGEAERAI AGG ASKDL EGSPGAARS RFPGEVVVDGS P+SEE+DTREEADGG GS AS+EVHGL RLTELFDPDGEDRLLA KFASVVGRIGREGRQKVAWADHCA LPRHLATREEVK +VRSVEAFLRSLLEGGTA T S NWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEG AG GGGL+VCYEDGLEPAKG
Sbjct: 1 MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLAQTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMHECKPLHLCVSLVPDNLPSPAECLTGAELQ-------------------------------------------------------------------------------DYFTTENPFILELEDHLGKRDAAVVRDFYGRPRFRGAATPLPHETQLEHEHIFKTEVDRLLGAAGEESANGAEQPAADTKGEAERAIVAGGTASKDLAEGSPGAARSGRFPGEVVVDGSTPVSEEADTREEADGGGGGSGASQEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVAWADHCACLPRHLATREEVKGAVRSVEAFLRSLLEGGTATTXXXXXXSANWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEGVAGRGGGLEVCYEDGLEPAKG 482
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A024UGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGZ0_9STRA) HSP 1 Score: 167 bits (422), Expect = 9.350e-43 Identity = 109/295 (36.95%), Postives = 139/295 (47.12%), Query Frame = 3
Query: 57 LRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHER 941
+R +VDDH AL IH+AIR LPF + VHFDAHPDL D+PA++ F P +LYD L +E GIA ++LPL + GH+ +L WV+P WA+Q T GD F VG+ G L V+S YFVD+ +Y E ++ + + L L V + D SPA SVRP PL P+VLDICLDYFTT NPF+ E E G DA V+R Y +F+ L H QLEH R
Sbjct: 5 MRVVVVDDHHHALEPIHQAIRRRVLPFANWTLVHFDAHPDLAFPRDVPAKSVFTPSQLYDVLDASEAGIASFVLPLSFAGHMESLIWVKPPWAQQMTLGDQAFAVGEHIDNGTLCVTSNHSYFVDEAMYAPESELTKKQTLQLTVCELHD---SPAS----------SVRP--------------------------------------------------PLG------------PFVLDICLDYFTTLNPFLHEFEKACGVDDAQVLRHIYGGLQFKNIPPTLSHAQQLEHHR 224
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A813HJC0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HJC0_POLGL) HSP 1 Score: 162 bits (409), Expect = 1.240e-39 Identity = 150/564 (26.60%), Postives = 224/564 (39.72%), Query Frame = 3
Query: 66 YIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFR-PHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGK----------------------------------------------LRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLLGAAGEESADWAERSAADTKGEAERAIAAGGLASKDLVEGSPGAARSRRFPGEVVVDGSAPISEES---DTREEADGGXXGSNASEEVHGLGRLTELFDPDGEDRLLARKFASVVGRIGREGRQKVAWADHCASLPRHLATREEVKSSVRSVEAFLRSLLEGGTAATSSSSSSSVNWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYG 1607
++ + H +AL +H AIR LPF GL+ VH DAHPD+ + +PAE F+ P +Y L GIA WILP VY GHL+ +WWVRP WARQ DGD+R VG+ T + +R+S + PYFV+D ++ + ++++ KPL VS +P GA+ R+ A + + K+ ++ KT G+ PWVLD+CLDYF NPF+ ++ HI AA D + FR + +E F +E D A E E AA+ +D +GS DG+ P +E+ D EE +G E V LG+ P L +SV+ + ++ A +LP H + E++ + + E FL L +S + GRP ++T+ARS DG+ P + F+EQ V+ +L R +G
Sbjct: 34 FVCEYHDEALRCLHVAIRRRKLPFDGLTMVHLDAHPDMSASTTLPAEVVFQEPWHVYSALRSDPSGIASWILPAVYGGHLNCVWWVRPEWARQIADGDYRVQVGRAVTTSEGGSSSSSAPAASKDLPKKGLARFTPRPPTSGVTTANLQQEAGPLETIRISCSQPYFVEDGIFAPDSELKDAKPLQFLVSQMP-----------GADERI----------ALWEEEEDRKAGSL--------PKTSGS--------------------------------PWVLDVCLDYFACGNPFLTQVRPHI----AAAFADVQDAATFRAGS--------VEDAARFISERDAFDAAFAEVLRQAIEAPAAE----------------EDDAQGSE------------QGDGTIPEEDEAVDLDEEEEEEG-----PLEEAVAALGKYL----PGSRREALLAALSSVLREVRESELHQLRDAGSMVTLPLHPPSESELRERLGAFEDFLTRLCA------QHASKAGNGADGRPAIVTIARSVVDGFCPMRWLLFLEQGVMEVLRRRFG 481
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A485KQ73_9STRA (Aste57867_10189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ73_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.930e-38 Identity = 100/301 (33.22%), Postives = 133/301 (44.19%), Query Frame = 3
Query: 69 IVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
+VDDH L IH+AIR LPF+ + VHFDAHPDL +PA+ F P YD L +E GIA ++LPLVY GH+ L WV+P WA Q G F VG+ TG+LRVSS YFVD+ +Y ++ + + LHL V EL S+ P A AD P+VLDICLDYF T NPF + G D ++R Y F+ A++ L H + EH+ + +DR++
Sbjct: 8 VVDDHHHVLEPIHKAIRKRILPFSNWNMVHFDAHPDLAFPRSIPADRIFAPFAFYDDLDESEAGIASFLLPLVYAGHMKNLVWVKPPWATQMLLGHEEFTVGRHDATGELRVSSQHTYFVDEVMYANPTELSKAQTLHLSV----------------CELGSGSMPP-----APAD--------------------------------------------------------PYVLDICLDYFATINPFQKAFDAACGVEDGQLLRFIYGNLAFKTASSTLSHVEKREHQALHAAFLDRII 231
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: T0QNM0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNM0_SAPDV) HSP 1 Score: 154 bits (389), Expect = 5.410e-38 Identity = 97/302 (32.12%), Postives = 131/302 (43.38%), Query Frame = 3
Query: 66 YIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
++VDDH L IHRAIR LPF + VH DAH DL P +PA T F P LYD L +E GIA ++LPL Y GH+ L W++P WA Q G H F VGQ K TG L V+S YF+D+ LY + + + L L V+ +P + V G P+VLDICLDYF+T NPF ++ +G+ A+++ Y ++ LPH T+LEH R+F + + L
Sbjct: 7 HVVDDHHHVLEPIHRAIRQRRLPFANFTIVHLDAHADLAFPPSLPAATIFSPDALYDGLDASEAGIASFLLPLAYAGHMHRLVWIKPPWATQMAIGTHAFDVGQHKATGCLGVTSHESYFIDENLYAPRDALDKPASLELTVAELP-------------------------------------AAPVPEG-------------------------------------------PYVLDICLDYFSTLNPFRQDITRAMGEDTASLLSCIYGDLSYKKKTVELPHSTRLEHGRLFASTIKTLF 228
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A1V9Z4E5_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4E5_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.200e-36 Identity = 100/302 (33.11%), Postives = 129/302 (42.72%), Query Frame = 3
Query: 66 YIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
Y+VDDH H AIR LPF+ ++ VH DAHPDL +PA T F P LYD L ++ GIA ++LPL Y GHL L WV+P WA Q GDH F VG T VSS YFVD+ L+ R E + E KPL L V+ +P A +PT + +VLDICLDYF+T NPF+ +L G AA+VR Y ++ +PHE L H R+F + + +
Sbjct: 11 YVVDDH-------HHAIRRRLLPFSNVTIVHLDAHPDLAFPRSIPAATIFAPEALYDALDASDAGIASFLLPLAYAGHLRHLVWVKPPWATQMATGDHEFLVG----TDACAVSSHEAYFVDEDLFARAETLSEAKPLSLTVAELP----------------------------------AAPTPTASS---------------------------------------------FVLDICLDYFSTHNPFLQDLVAAKGPTTAALVRSVYCGLLYKCVPAAVPHEVALAHRRLFASTMTTIF 222
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A835Z3T2_9STRA (UPF0489 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T2_9STRA) HSP 1 Score: 142 bits (357), Expect = 7.000e-36 Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 3
Query: 39 ARPTPSLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGK 395
A P++ C++V+DH DAL H A+R L G++ VH DAHPDL VT DM A+ CF+P LYD L + GGIAEWI+PLVY+GHL T+WW+RP WA QFTDG + VG+ + TG+
Sbjct: 10 AAAAPTIPCHVVEDHHDALPFWHLAMRRKRLAQQGITMVHIDAHPDLCVTEDMQADICFQPRALYDALDNSVGGIAEWIIPLVYEGHLDTIWWLRPPWADQFTDGTYALGVGKSQATGE 128
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A1V9ZZD1_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZD1_9STRA) HSP 1 Score: 148 bits (373), Expect = 8.790e-36 Identity = 98/306 (32.03%), Postives = 143/306 (46.73%), Query Frame = 3
Query: 57 LRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSE-KSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
L ++VDDH L IH+AIR LPF + +HFDAH DL +PA+ FRP LYD L ++ GIA ++LPLVY GH++ L WV+P WA+Q G F VG+ + LR++S YFV++ LY ++ + K ++ SLV LT AEL P+Q K Q ++LDICLDYF+T NPF EL+ +G++ ++R Y ++ + LPH+ QLEH + F + ++ +L
Sbjct: 4 LEVHVVDDHHHVLEPIHKAIRRRVLPFNEFAIIHFDAHADLAFPNTLPADVIFRPENLYDELDASDAGIASFLLPLVYAGHMTKLIWVKPPWAKQMALGTQDFVVGKHLTSECLRLTSKETYFVEEGLYAPLNELTKTKSMNN--SLVQ---------LTVAEL---------------------------------------------------------PMQVNLKGQA-------YILDICLDYFSTLNPFFEELKPALGEQKTLLIRRIYCGLCYKKSELLLPHDVQLEHYKKFSSTINTIL 234
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A2R5G5M2_9STRA (UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5M2_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.290e-34 Identity = 96/289 (33.22%), Postives = 133/289 (46.02%), Query Frame = 3
Query: 54 SLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVK-------VT--------GKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 875
+L Y+ DH++AL +H AIR G + F+GL+ +H D+HPDLMV P MPA+ F+P EL+ LA++E GIAE+ILP VY GHL L W+RP WA Q DG F VG+ +T G LRV+ PY+ D+ L C ED+Q K + + V+ A C A ++V C R PWVLDICLDYF+ NPF ++L+ +G + A + ++ Y
Sbjct: 41 TLPVYVSGDHNEALESLHAAIRVGEVAFSGLAMLHVDSHPDLMVPPRMPADLVFKPRELHWELAKSETGIAEFILPAVYAGHLERLVWLRPTWADQLPDGQWEFKVGKAPGCSADEIITEDDERVNGGPLRVTWRTPYYEDEGLTCPVEDLQGAKSVEILVA-------GAATCTPQAFVQV---------------------------------------------CGDR---------------------PWVLDICLDYFSVNNPFYVDLQTKLGVKAATLCQEVY 256
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A067CX65_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CX65_SAPPC) HSP 1 Score: 137 bits (346), Expect = 4.780e-32 Identity = 70/149 (46.98%), Postives = 89/149 (59.73%), Query Frame = 3
Query: 57 LRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVP 503
L ++VDDH L IHRAIR LPF + VH DAH DL P +PA T F P LYD L ++ GIA ++LPL Y GH+ L W++P WA Q G H F VGQ K TG L V+S A YFVD+ LY + +++ L L V+ +P
Sbjct: 4 LEVHVVDDHHHVLEPIHRAIRQRRLPFANCTIVHVDAHADLAFPPSLPAATIFSPGALYDGLDASDAGIASFLLPLAYAGHIHRLVWIKPPWATQMAIGTHTFHVGQQKDTGCLGVTSHASYFVDENLYAPLDALEKPASLELTVAELP 152 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8283.19629.1 >prot_Ecto-sp13_S_contig8283.19629.1 ID=prot_Ecto-sp13_S_contig8283.19629.1|Name=mRNA_Ecto-sp13_S_contig8283.19629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp MERNRVAGRKRARPTPSLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVback to top mRNA from alignment at Ecto-sp13_S_contig8283:1615..4527- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8283.19629.1 ID=mRNA_Ecto-sp13_S_contig8283.19629.1|Name=mRNA_Ecto-sp13_S_contig8283.19629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2913bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8283:1615..4527- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8283:1615..4527- >mRNA_Ecto-sp13_S_contig8283.19629.1 ID=mRNA_Ecto-sp13_S_contig8283.19629.1|Name=mRNA_Ecto-sp13_S_contig8283.19629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1686bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8283:1615..4527- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |