mRNA_Ecto-sp13_S_contig8283.19629.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8283.19629.1
Unique NamemRNA_Ecto-sp13_S_contig8283.19629.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: D8LI72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI72_ECTSI)

HSP 1 Score: 839 bits (2167), Expect = 7.340e-303
Identity = 441/561 (78.61%), Postives = 451/561 (80.39%), Query Frame = 3
Query:    6 MERNRVAGRKRARPTPSLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLLGAAGEESADWAERSAADTKGEAERAIAAGGLASKDLVEGSPGAARSRRFPGEVVVDGSAPISEESDTREEADGGXXGSNASEEVHGLGRLTELFDPDGEDRLLARKFASVVGRIGREGRQKVAWADHCASLPRHLATREEVKSSVRSVEAFLRSLLEGGTAATSSSSSSSVNWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEGKAGYGGGLQVCYEDGLEPAKG 1688
            MER RVAGRKRARPTPSLRCYIVDDH DALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLA+TEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVK TGKLRVSSTAPYFVDDRLYCREEDM ECKPLHLCVSLVPDNL SPAECLTGAEL+                                                                               DYFTTENPFILELEDH+GKRDAAVVRDFY RPRFRGAATPLPHETQLEHE IFKTEVDRLLGAAGEESA+ AE+ AADTKGEAERAI AGG ASKDL EGSPGAARS RFPGEVVVDGS P+SEE+DTREEADGG  GS AS+EVHGL RLTELFDPDGEDRLLA KFASVVGRIGREGRQKVAWADHCA LPRHLATREEVK +VRSVEAFLRSLLEGGTA T      S NWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEG AG GGGL+VCYEDGLEPAKG
Sbjct:    1 MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLAQTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMHECKPLHLCVSLVPDNLPSPAECLTGAELQ-------------------------------------------------------------------------------DYFTTENPFILELEDHLGKRDAAVVRDFYGRPRFRGAATPLPHETQLEHEHIFKTEVDRLLGAAGEESANGAEQPAADTKGEAERAIVAGGTASKDLAEGSPGAARSGRFPGEVVVDGSTPVSEEADTREEADGGGGGSGASQEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVAWADHCACLPRHLATREEVKGAVRSVEAFLRSLLEGGTATTXXXXXXSANWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEGVAGRGGGLEVCYEDGLEPAKG 482          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A024UGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGZ0_9STRA)

HSP 1 Score: 167 bits (422), Expect = 9.350e-43
Identity = 109/295 (36.95%), Postives = 139/295 (47.12%), Query Frame = 3
Query:   57 LRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHER 941
            +R  +VDDH  AL  IH+AIR   LPF   + VHFDAHPDL    D+PA++ F P +LYD L  +E GIA ++LPL + GH+ +L WV+P WA+Q T GD  F VG+    G L V+S   YFVD+ +Y  E ++ + + L L V  + D   SPA           SVRP                                                  PL             P+VLDICLDYFTT NPF+ E E   G  DA V+R  Y   +F+     L H  QLEH R
Sbjct:    5 MRVVVVDDHHHALEPIHQAIRRRVLPFANWTLVHFDAHPDLAFPRDVPAKSVFTPSQLYDVLDASEAGIASFVLPLSFAGHMESLIWVKPPWAQQMTLGDQAFAVGEHIDNGTLCVTSNHSYFVDEAMYAPESELTKKQTLQLTVCELHD---SPAS----------SVRP--------------------------------------------------PLG------------PFVLDICLDYFTTLNPFLHEFEKACGVDDAQVLRHIYGGLQFKNIPPTLSHAQQLEHHR 224          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A813HJC0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HJC0_POLGL)

HSP 1 Score: 162 bits (409), Expect = 1.240e-39
Identity = 150/564 (26.60%), Postives = 224/564 (39.72%), Query Frame = 3
Query:   66 YIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFR-PHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGK----------------------------------------------LRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLLGAAGEESADWAERSAADTKGEAERAIAAGGLASKDLVEGSPGAARSRRFPGEVVVDGSAPISEES---DTREEADGGXXGSNASEEVHGLGRLTELFDPDGEDRLLARKFASVVGRIGREGRQKVAWADHCASLPRHLATREEVKSSVRSVEAFLRSLLEGGTAATSSSSSSSVNWSGRPGVITVARSEEDGYVPASMVAFVEQEVLAMLFRLYG 1607
            ++ + H +AL  +H AIR   LPF GL+ VH DAHPD+  +  +PAE  F+ P  +Y  L     GIA WILP VY GHL+ +WWVRP WARQ  DGD+R  VG+   T +                                              +R+S + PYFV+D ++  + ++++ KPL   VS +P           GA+ R+          A  +  +  K+ ++         KT G+                                PWVLD+CLDYF   NPF+ ++  HI    AA   D  +   FR  +        +E    F +E D    A  E      E  AA+                +D  +GS               DG+ P  +E+   D  EE +G        E V  LG+      P      L    +SV+  +      ++  A    +LP H  +  E++  + + E FL  L          +S +     GRP ++T+ARS  DG+ P   + F+EQ V+ +L R +G
Sbjct:   34 FVCEYHDEALRCLHVAIRRRKLPFDGLTMVHLDAHPDMSASTTLPAEVVFQEPWHVYSALRSDPSGIASWILPAVYGGHLNCVWWVRPEWARQIADGDYRVQVGRAVTTSEGGSSSSSAPAASKDLPKKGLARFTPRPPTSGVTTANLQQEAGPLETIRISCSQPYFVEDGIFAPDSELKDAKPLQFLVSQMP-----------GADERI----------ALWEEEEDRKAGSL--------PKTSGS--------------------------------PWVLDVCLDYFACGNPFLTQVRPHI----AAAFADVQDAATFRAGS--------VEDAARFISERDAFDAAFAEVLRQAIEAPAAE----------------EDDAQGSE------------QGDGTIPEEDEAVDLDEEEEEEG-----PLEEAVAALGKYL----PGSRREALLAALSSVLREVRESELHQLRDAGSMVTLPLHPPSESELRERLGAFEDFLTRLCA------QHASKAGNGADGRPAIVTIARSVVDGFCPMRWLLFLEQGVMEVLRRRFG 481          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A485KQ73_9STRA (Aste57867_10189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ73_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.930e-38
Identity = 100/301 (33.22%), Postives = 133/301 (44.19%), Query Frame = 3
Query:   69 IVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
            +VDDH   L  IH+AIR   LPF+  + VHFDAHPDL     +PA+  F P   YD L  +E GIA ++LPLVY GH+  L WV+P WA Q   G   F VG+   TG+LRVSS   YFVD+ +Y    ++ + + LHL V                 EL   S+ P     A AD                                                        P+VLDICLDYF T NPF    +   G  D  ++R  Y    F+ A++ L H  + EH+ +    +DR++
Sbjct:    8 VVDDHHHVLEPIHKAIRKRILPFSNWNMVHFDAHPDLAFPRSIPADRIFAPFAFYDDLDESEAGIASFLLPLVYAGHMKNLVWVKPPWATQMLLGHEEFTVGRHDATGELRVSSQHTYFVDEVMYANPTELSKAQTLHLSV----------------CELGSGSMPP-----APAD--------------------------------------------------------PYVLDICLDYFATINPFQKAFDAACGVEDGQLLRFIYGNLAFKTASSTLSHVEKREHQALHAAFLDRII 231          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: T0QNM0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNM0_SAPDV)

HSP 1 Score: 154 bits (389), Expect = 5.410e-38
Identity = 97/302 (32.12%), Postives = 131/302 (43.38%), Query Frame = 3
Query:   66 YIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
            ++VDDH   L  IHRAIR   LPF   + VH DAH DL   P +PA T F P  LYD L  +E GIA ++LPL Y GH+  L W++P WA Q   G H F VGQ K TG L V+S   YF+D+ LY   + + +   L L V+ +P                                     +  V  G                                           P+VLDICLDYF+T NPF  ++   +G+  A+++   Y    ++     LPH T+LEH R+F + +  L 
Sbjct:    7 HVVDDHHHVLEPIHRAIRQRRLPFANFTIVHLDAHADLAFPPSLPAATIFSPDALYDGLDASEAGIASFLLPLAYAGHMHRLVWIKPPWATQMAIGTHAFDVGQHKATGCLGVTSHESYFIDENLYAPRDALDKPASLELTVAELP-------------------------------------AAPVPEG-------------------------------------------PYVLDICLDYFSTLNPFRQDITRAMGEDTASLLSCIYGDLSYKKKTVELPHSTRLEHGRLFASTIKTLF 228          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A1V9Z4E5_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4E5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.200e-36
Identity = 100/302 (33.11%), Postives = 129/302 (42.72%), Query Frame = 3
Query:   66 YIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
            Y+VDDH       H AIR   LPF+ ++ VH DAHPDL     +PA T F P  LYD L  ++ GIA ++LPL Y GHL  L WV+P WA Q   GDH F VG    T    VSS   YFVD+ L+ R E + E KPL L V+ +P                                   A +PT +                                              +VLDICLDYF+T NPF+ +L    G   AA+VR  Y    ++     +PHE  L H R+F + +  + 
Sbjct:   11 YVVDDH-------HHAIRRRLLPFSNVTIVHLDAHPDLAFPRSIPAATIFAPEALYDALDASDAGIASFLLPLAYAGHLRHLVWVKPPWATQMATGDHEFLVG----TDACAVSSHEAYFVDEDLFARAETLSEAKPLSLTVAELP----------------------------------AAPTPTASS---------------------------------------------FVLDICLDYFSTHNPFLQDLVAAKGPTTAALVRSVYCGLLYKCVPAAVPHEVALAHRRLFASTMTTIF 222          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A835Z3T2_9STRA (UPF0489 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 7.000e-36
Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 3
Query:   39 ARPTPSLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGK 395
            A   P++ C++V+DH DAL   H A+R   L   G++ VH DAHPDL VT DM A+ CF+P  LYD L  + GGIAEWI+PLVY+GHL T+WW+RP WA QFTDG +   VG+ + TG+
Sbjct:   10 AAAAPTIPCHVVEDHHDALPFWHLAMRRKRLAQQGITMVHIDAHPDLCVTEDMQADICFQPRALYDALDNSVGGIAEWIIPLVYEGHLDTIWWLRPPWADQFTDGTYALGVGKSQATGE 128          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A1V9ZZD1_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZD1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.790e-36
Identity = 98/306 (32.03%), Postives = 143/306 (46.73%), Query Frame = 3
Query:   57 LRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSE-KSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAATPLPHETQLEHERIFKTEVDRLL 971
            L  ++VDDH   L  IH+AIR   LPF   + +HFDAH DL     +PA+  FRP  LYD L  ++ GIA ++LPLVY GH++ L WV+P WA+Q   G   F VG+   +  LR++S   YFV++ LY    ++ + K ++   SLV          LT AEL                                                         P+Q   K Q        ++LDICLDYF+T NPF  EL+  +G++   ++R  Y    ++ +   LPH+ QLEH + F + ++ +L
Sbjct:    4 LEVHVVDDHHHVLEPIHKAIRRRVLPFNEFAIIHFDAHADLAFPNTLPADVIFRPENLYDELDASDAGIASFLLPLVYAGHMTKLIWVKPPWAKQMALGTQDFVVGKHLTSECLRLTSKETYFVEEGLYAPLNELTKTKSMNN--SLVQ---------LTVAEL---------------------------------------------------------PMQVNLKGQA-------YILDICLDYFSTLNPFFEELKPALGEQKTLLIRRIYCGLCYKKSELLLPHDVQLEHYKKFSSTINTIL 234          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A2R5G5M2_9STRA (UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5M2_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.290e-34
Identity = 96/289 (33.22%), Postives = 133/289 (46.02%), Query Frame = 3
Query:   54 SLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVK-------VT--------GKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASDGAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 875
            +L  Y+  DH++AL  +H AIR G + F+GL+ +H D+HPDLMV P MPA+  F+P EL+  LA++E GIAE+ILP VY GHL  L W+RP WA Q  DG   F VG+         +T        G LRV+   PY+ D+ L C  ED+Q  K + + V+         A C   A ++V                                             C  R                     PWVLDICLDYF+  NPF ++L+  +G + A + ++ Y
Sbjct:   41 TLPVYVSGDHNEALESLHAAIRVGEVAFSGLAMLHVDSHPDLMVPPRMPADLVFKPRELHWELAKSETGIAEFILPAVYAGHLERLVWLRPTWADQLPDGQWEFKVGKAPGCSADEIITEDDERVNGGPLRVTWRTPYYEDEGLTCPVEDLQGAKSVEILVA-------GAATCTPQAFVQV---------------------------------------------CGDR---------------------PWVLDICLDYFSVNNPFYVDLQTKLGVKAATLCQEVY 256          
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Match: A0A067CX65_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CX65_SAPPC)

HSP 1 Score: 137 bits (346), Expect = 4.780e-32
Identity = 70/149 (46.98%), Postives = 89/149 (59.73%), Query Frame = 3
Query:   57 LRCYIVDDHSDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVP 503
            L  ++VDDH   L  IHRAIR   LPF   + VH DAH DL   P +PA T F P  LYD L  ++ GIA ++LPL Y GH+  L W++P WA Q   G H F VGQ K TG L V+S A YFVD+ LY   + +++   L L V+ +P
Sbjct:    4 LEVHVVDDHHHVLEPIHRAIRQRRLPFANCTIVHVDAHADLAFPPSLPAATIFSPGALYDGLDASDAGIASFLLPLAYAGHIHRLVWIKPPWATQMAIGTHTFHVGQQKDTGCLGVTSHASYFVDENLYAPLDALEKPASLELTVAELP 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8283.19629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI72_ECTSI7.340e-30378.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024UGZ0_9STRA9.350e-4336.95Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A813HJC0_POLGL1.240e-3926.60Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A485KQ73_9STRA3.930e-3833.22Aste57867_10189 protein n=1 Tax=Aphanomyces stella... [more]
T0QNM0_SAPDV5.410e-3832.12Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9Z4E5_9STRA1.200e-3633.11UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogy... [more]
A0A835Z3T2_9STRA7.000e-3653.78UPF0489 domain-containing protein n=1 Tax=Tribonem... [more]
A0A1V9ZZD1_9STRA8.790e-3632.03UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca... [more]
A0A2R5G5M2_9STRA1.290e-3433.22UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalg... [more]
A0A067CX65_SAPPC4.780e-3246.98Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8283contigEcto-sp13_S_contig8283:1615..4527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score846.3
Seed ortholog evalue8.4e-243
Seed eggNOG ortholog2880.D8LI72
Preferred nameC5orf22
Model size1867
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0009966,GO:0009968,GO:0010646,GO:0010648,GO:0023051,GO:0023057,GO:0046578,GO:0046580,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0051056,GO:0051058,GO:0065007,GO:1902531,GO:1902532
Exons4
EggNOG free text desc.UPF0489 domain
EggNOG OGs28PEW@1,2QW2U@2759
Ec32 ortholog descriptionUncharacterised protein family UPF0489
Ec32 orthologEc-14_003400.1
Cds size1686
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8283.19629.1prot_Ecto-sp13_S_contig8283.19629.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8283 1791..4522 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464097.4737725-UTR-Ecto-sp13_S_contig8283:1614..17901681464097.4737725-UTR-Ecto-sp13_S_contig8283:1614..1790Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8283 1615..1790 -
1681464097.53661-UTR-Ecto-sp13_S_contig8283:4522..45271681464097.53661-UTR-Ecto-sp13_S_contig8283:4522..4527Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8283 4523..4527 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464097.4860961-CDS-Ecto-sp13_S_contig8283:1790..26931681464097.4860961-CDS-Ecto-sp13_S_contig8283:1790..2693Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8283 1791..2693 -
1681464097.5002437-CDS-Ecto-sp13_S_contig8283:2923..33501681464097.5002437-CDS-Ecto-sp13_S_contig8283:2923..3350Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8283 2924..3350 -
1681464097.5104609-CDS-Ecto-sp13_S_contig8283:3694..37621681464097.5104609-CDS-Ecto-sp13_S_contig8283:3694..3762Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8283 3695..3762 -
1681464097.5193172-CDS-Ecto-sp13_S_contig8283:4234..45221681464097.5193172-CDS-Ecto-sp13_S_contig8283:4234..4522Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8283 4235..4522 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8283.19629.1

>prot_Ecto-sp13_S_contig8283.19629.1 ID=prot_Ecto-sp13_S_contig8283.19629.1|Name=mRNA_Ecto-sp13_S_contig8283.19629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
MERNRVAGRKRARPTPSLRCYIVDDHSDALSKIHRAIRNGALPFTGLSAV
HFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLS
TLWWVRPRWARQFTDGDHRFCVGQVKVTGKLRVSSTAPYFVDDRLYCREE
DMQECKPLHLCVSLVPDNLQSPAECLTGAELRVPSVRPQSRVGAQADASD
GAKSPTVAHGNDDGTEKTEGARVATETACSTRFTTSTTPLQSEKSQGDCS
RPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGAAT
PLPHETQLEHERIFKTEVDRLLGAAGEESADWAERSAADTKGEAERAIAA
GGLASKDLVEGSPGAARSRRFPGEVVVDGSAPISEESDTREEADGGGGGS
NASEEVHGLGRLTELFDPDGEDRLLARKFASVVGRIGREGRQKVAWADHC
ASLPRHLATREEVKSSVRSVEAFLRSLLEGGTAATSSSSSSSVNWSGRPG
VITVARSEEDGYVPASMVAFVEQEVLAMLFRLYGGDGAEGKAGYGGGLQV
CYEDGLEPAKG*
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mRNA from alignment at Ecto-sp13_S_contig8283:1615..4527-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8283.19629.1 ID=mRNA_Ecto-sp13_S_contig8283.19629.1|Name=mRNA_Ecto-sp13_S_contig8283.19629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2913bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8283:1615..4527- (Ectocarpus species13 EcNAP12_S_4_19m)
TACTGATGGAAAGAAACCGAGTTGCTGGGAGGAAACGTGCGAGACCAACG CCTTCTCTGCGATGCTACATCGTAGATGACCACAGCGATGCCTTGAGCAA AATACACAGGGCTATCCGAAACGGCGCGTTGCCGTTCACGGGCCTTTCGG CTGTCCATTTCGATGCCCACCCGGACTTGATGGTGACACCCGACATGCCC GCAGAAACTTGCTTCCGGCCCCACGAACTTTACGACACCCTGGCCCGGAC AGAGGGAGGTATCGCAGAGTGGATCCTACCGTTGGTATATCAGGTAAGGC ATCCATGGCTGCTGCTGTGGGCGTCCGTCGTGTATTGCGAGATTCCTGGC CATCCAGCACGTTTCCTCGCCGGTCGCTCTCGACTCAACCCGTTTTGCGC ACCCCAACCAAGCTGCATCTTCCAACACGTAATAATCGGTAACTTACATC TGAAGTCAGATGGACCCTAACCCTCGAACCCTCGTGTGAAGGGAGAATGA CGTGCCGAGATCGGGGGTCGTGTGCTATCGAACTGAAAACGAACGTGGGG AAAAAATCGGTCATAGAAGTGCACCACCACATTCACCCGTCTCGCATTTC GTATCACCGAATGAAGCGCAAGGACGAGGGAACAAAGGAGAGTTCCTCTT GTCCCGCAGTCTACCGACTGCACTCTCCATAGAAATAGTATGCATCCACC ATACTATGCTACGAGTAGCTGTAACAACGCGGACCTCCCGAACGTGCTTT CCTACACCTGGCTAGGGTCATCTTTCCACGCTGTGGTGGGTGAGACCGCG TTGGGCCAGGCAGTTCACGGACGGGGATCATCGGTACGTCATACTGCAAG CCTGCTGTATCCGCATGATCCGATGTGTCACTTCTCCATGTAGACAATTG CAGCAGCAGGTGCTCGTTAATCTCTCTGATGTTTGCTTGTATTACGATTG CGGTTACGACCCTGTGCGGGTGGAGCTCTCCATTTCATGATTTGCCTAGA TTCGTTCTCCGTTGCGCATTGTTCGCTCAGCCACACAAAGAGAACAGGCA ACATCGAAGGAGCCCAGTCAAAACAAGCACAGAAACCACGGCGAAACATT TCGACCAAATACCCGCCGGCGACCAGTCACCACGCAGGATGCCAACGTCA CCGTTTCTGCTGCCGTATGTGGTTCAGTTTTTGCGTCGGCCAGGTGAAGG TCACAGGGAAGCTTCGAGTATCCTCGACGGCACCCTATTTCGTCGACGAC AGGCTCTACTGCCGCGAGGAGGACATGCAGGAATGCAAACCCCTGCACCT GTGCGTCAGCCTCGTCCCCGACAACCTGCAGTCTCCAGCGGAGTGCCTCA CTGGGGCCGAGCTGCGGGTGCCCTCGGTTCGCCCGCAGAGCCGCGTGGGC GCCCAAGCAGATGCCAGCGATGGAGCGAAGTCACCAACCGTCGCGCATGG AAACGACGACGGGACGGAGAAGACGGAGGGTGCGCGTGTGGCAACAGAAA CGGCTTGTTCGACGAGGTTCACGACCTCAACGACACCACTGCAGTCGGAG AAATCTCAGGGCGACTGCAGCCGACCAACGCCGTGGGTACTGGACATCTG CTTGGTAGGCGTCCACACGACTGGCGTACATGTAGCTTCAAAAGACATTC GTAAAGGAGCGCGGCACCTGCCTATTTTTTTGTCGAAGATACCATGCTTG TGATACGTTGTGCGCATAGCGAAGACGGGCCAACCACCGACGAAGATACA AACGCTTGTGATACGCTGTGTGTGCATAAAATAGCTAAAGACCACCCTAC ACCACCGACTCCACTTTCGACACGTGGCCTGCAGGACTACTTCACCACCG AGAACCCCTTCATTTTGGAGCTTGAGGACCACATCGGAAAGAGGGACGCG GCCGTGGTTCGTGATTTTTACGAAAGGCCTCGATTCCGCGGGGCCGCCAC TCCGCTTCCGCACGAGACGCAGCTGGAACACGAGCGCATCTTCAAGACGG AGGTCGACAGGCTTCTTGGAGCCGCCGGCGAGGAGAGTGCCGACTGGGCC GAACGATCTGCTGCGGACACGAAGGGAGAAGCCGAACGCGCGATCGCAGC GGGTGGTCTAGCATCGAAGGACCTCGTGGAGGGGTCTCCTGGTGCTGCTC GGAGTAGACGATTCCCTGGAGAGGTGGTCGTTGACGGCTCGGCGCCTATT TCTGAGGAAAGCGACACGAGGGAGGAGGCGGATGGTGGTGGAGGTGGCAG TAACGCGAGCGAAGAGGTTCACGGATTGGGGCGGCTGACGGAGCTGTTCG ATCCCGACGGCGAAGATCGCCTGCTCGCCAGGAAGTTTGCCTCCGTCGTT GGCCGCATTGGGCGGGAAGGACGGCAAAAAGTCGCGTGGGCGGACCACTG CGCGAGCTTGCCGCGGCACTTAGCGACCCGGGAAGAAGTGAAAAGTTCGG TGCGGTCGGTGGAAGCGTTCCTGCGGTCGTTGCTCGAGGGCGGCACTGCC GCAACCAGCAGCAGCAGCAGTAGCAGCGTGAATTGGAGCGGGAGGCCCGG CGTCATCACGGTGGCGCGCTCCGAGGAGGATGGCTATGTGCCGGCAAGCA TGGTCGCGTTTGTCGAGCAGGAGGTCCTGGCGATGCTCTTTCGCCTGTAT GGTGGGGATGGGGCGGAGGGAAAAGCCGGGTATGGTGGCGGGCTGCAAGT GTGCTACGAAGATGGGTTGGAGCCCGCGAAGGGTTGAATGGTCGGTTCGA GAACACGCTGGTTGTTGGTTGGGTCTGGGTGGGAGCAATGTGGGTAGGCG ATCACTTGTCTCTCCTAACTAACTAGGTGCGACGCGCACCTTTCACAGTA CACCGTCCCACGGGCAAATGGTGTTTGGGCGCCGGTGGTTTCCTCGTTTT ATCTCTTTGGAAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8283:1615..4527-

>mRNA_Ecto-sp13_S_contig8283.19629.1 ID=mRNA_Ecto-sp13_S_contig8283.19629.1|Name=mRNA_Ecto-sp13_S_contig8283.19629.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1686bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8283:1615..4527- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAAGAAACCGAGTTGCTGGGAGGAAACGTGCGAGACCAACGCCTTC
TCTGCGATGCTACATCGTAGATGACCACAGCGATGCCTTGAGCAAAATAC
ACAGGGCTATCCGAAACGGCGCGTTGCCGTTCACGGGCCTTTCGGCTGTC
CATTTCGATGCCCACCCGGACTTGATGGTGACACCCGACATGCCCGCAGA
AACTTGCTTCCGGCCCCACGAACTTTACGACACCCTGGCCCGGACAGAGG
GAGGTATCGCAGAGTGGATCCTACCGTTGGTATATCAGGGTCATCTTTCC
ACGCTGTGGTGGGTGAGACCGCGTTGGGCCAGGCAGTTCACGGACGGGGA
TCATCGTTTTTGCGTCGGCCAGGTGAAGGTCACAGGGAAGCTTCGAGTAT
CCTCGACGGCACCCTATTTCGTCGACGACAGGCTCTACTGCCGCGAGGAG
GACATGCAGGAATGCAAACCCCTGCACCTGTGCGTCAGCCTCGTCCCCGA
CAACCTGCAGTCTCCAGCGGAGTGCCTCACTGGGGCCGAGCTGCGGGTGC
CCTCGGTTCGCCCGCAGAGCCGCGTGGGCGCCCAAGCAGATGCCAGCGAT
GGAGCGAAGTCACCAACCGTCGCGCATGGAAACGACGACGGGACGGAGAA
GACGGAGGGTGCGCGTGTGGCAACAGAAACGGCTTGTTCGACGAGGTTCA
CGACCTCAACGACACCACTGCAGTCGGAGAAATCTCAGGGCGACTGCAGC
CGACCAACGCCGTGGGTACTGGACATCTGCTTGGACTACTTCACCACCGA
GAACCCCTTCATTTTGGAGCTTGAGGACCACATCGGAAAGAGGGACGCGG
CCGTGGTTCGTGATTTTTACGAAAGGCCTCGATTCCGCGGGGCCGCCACT
CCGCTTCCGCACGAGACGCAGCTGGAACACGAGCGCATCTTCAAGACGGA
GGTCGACAGGCTTCTTGGAGCCGCCGGCGAGGAGAGTGCCGACTGGGCCG
AACGATCTGCTGCGGACACGAAGGGAGAAGCCGAACGCGCGATCGCAGCG
GGTGGTCTAGCATCGAAGGACCTCGTGGAGGGGTCTCCTGGTGCTGCTCG
GAGTAGACGATTCCCTGGAGAGGTGGTCGTTGACGGCTCGGCGCCTATTT
CTGAGGAAAGCGACACGAGGGAGGAGGCGGATGGTGGTGGAGGTGGCAGT
AACGCGAGCGAAGAGGTTCACGGATTGGGGCGGCTGACGGAGCTGTTCGA
TCCCGACGGCGAAGATCGCCTGCTCGCCAGGAAGTTTGCCTCCGTCGTTG
GCCGCATTGGGCGGGAAGGACGGCAAAAAGTCGCGTGGGCGGACCACTGC
GCGAGCTTGCCGCGGCACTTAGCGACCCGGGAAGAAGTGAAAAGTTCGGT
GCGGTCGGTGGAAGCGTTCCTGCGGTCGTTGCTCGAGGGCGGCACTGCCG
CAACCAGCAGCAGCAGCAGTAGCAGCGTGAATTGGAGCGGGAGGCCCGGC
GTCATCACGGTGGCGCGCTCCGAGGAGGATGGCTATGTGCCGGCAAGCAT
GGTCGCGTTTGTCGAGCAGGAGGTCCTGGCGATGCTCTTTCGCCTGTATG
GTGGGGATGGGGCGGAGGGAAAAGCCGGGTATGGTGGCGGGCTGCAAGTG
TGCTACGAAGATGGGTTGGAGCCCGCGAAGGGTTGA
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