mRNA_Ecto-sp13_S_contig82811.19627.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: D7G8Q5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q5_ECTSI) HSP 1 Score: 145 bits (365), Expect = 5.990e-43 Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 1
Query: 1 AHVLVFLIGVSCLPVPGRRMSLLTGIKTRLGLVGVGSNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
AHVLVFLIG+SCL VPGRRMSLLTGIKTRLGLVGV +NATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK
Sbjct: 29 AHVLVFLIGLSCLSVPGRRMSLLTGIKTRLGLVGVSTNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 107
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: A0A6H5L1E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1E1_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.820e-30 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 1
Query: 58 MSLLTGIKTRLGLVGVGSNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
MS+LTGIKTRLGLVGV +NATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK
Sbjct: 1 MSVLTGIKTRLGLVGVSTNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 60
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: H3GMJ4_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GMJ4_PHYRM) HSP 1 Score: 58.5 bits (140), Expect = 2.730e-9 Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 94 LVGVGSNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
L G +A+S+ VA+ERL IILAHQRG +L G+DL ALQ E+ ECV+
Sbjct: 20 LFGEAEHASSKSVAKERLQIILAHQRGSQVLAGVDLAALQQELLECVQ 67
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: A0A8K1CBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBG6_PYTOL) HSP 1 Score: 57.4 bits (137), Expect = 1.000e-8 Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 109 SNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
+ A+S+ VA+ERL IILAHQRG +L G+DL+ALQ+E+ ECV+
Sbjct: 31 TQASSKSVAKERLQIILAHQRGSQVLAGVDLQALQSELLECVQ 73
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: A0A2D4BJA3_PYTIN (Cell division topological specificity factor MinE (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJA3_PYTIN) HSP 1 Score: 56.6 bits (135), Expect = 1.100e-8 Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 1
Query: 109 SNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
++++S+ VA+ERL IILAHQRG +L G+DL+ALQ+E+ ECV+
Sbjct: 26 ASSSSKSVAKERLQIILAHQRGSQVLAGVDLQALQSELLECVQ 68
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: A0A6G0WGC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGC5_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.480e-8 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 64 LLTGIKTRLGLVGVGSNATS--RGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
LL T+ G+V +NA S + +A+ERL IILAHQRG L G++L ALQAE+ CV+
Sbjct: 4 LLHNFLTKTGVVTAPTNAASASKNIAKERLQIILAHQRGSQALSGVNLNALQAELLACVQ 63
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: A0A425CLZ3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CLZ3_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 6.300e-8 Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 1
Query: 106 GSNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
G +++S+ V +ERL IILAHQRG +L G+DL ALQ E+ ECV+
Sbjct: 25 GHSSSSKSVVKERLQIILAHQRGSQVLTGVDLAALQQELLECVQ 68
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: K3WAM2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAM2_GLOUD) HSP 1 Score: 55.1 bits (131), Expect = 6.870e-8 Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 109 SNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
+ +S+ VA+ERL IILAHQRG +L G+DL+ALQ E+ ECV+
Sbjct: 32 AKTSSKSVAKERLQIILAHQRGSQVLAGVDLQALQKELLECVQ 74
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: A0A662X0A3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0A3_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 9.050e-8 Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 109 SNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
S A+ + VA+ERL IILAHQRG +L G+DL ALQ E+ ECV+
Sbjct: 29 SAASPKSVAKERLQIILAHQRGSQVLAGVDLAALQQELLECVQ 71
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Match: A0A3F2RXG2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXG2_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.310e-7 Identity = 24/43 (55.81%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 109 SNATSRGVARERLSIILAHQRGDVLLEGIDLKALQAEVYECVK 237
++++S+ VA+ERL IIL+HQRG +L G+DL ALQ E+ ECV+
Sbjct: 29 TSSSSKSVAKERLQIILSHQRGSQILAGVDLAALQKELLECVQ 71 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig82811.19627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig82811.19627.1 >prot_Ecto-sp13_S_contig82811.19627.1 ID=prot_Ecto-sp13_S_contig82811.19627.1|Name=mRNA_Ecto-sp13_S_contig82811.19627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp AHVLVFLIGVSCLPVPGRRMSLLTGIKTRLGLVGVGSNATSRGVARERLSback to top mRNA from alignment at Ecto-sp13_S_contig82811:33..269- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig82811.19627.1 ID=mRNA_Ecto-sp13_S_contig82811.19627.1|Name=mRNA_Ecto-sp13_S_contig82811.19627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=237bp|location=Sequence derived from alignment at Ecto-sp13_S_contig82811:33..269- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig82811:33..269- >mRNA_Ecto-sp13_S_contig82811.19627.1 ID=mRNA_Ecto-sp13_S_contig82811.19627.1|Name=mRNA_Ecto-sp13_S_contig82811.19627.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=237bp|location=Sequence derived from alignment at Ecto-sp13_S_contig82811:33..269- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |