prot_Ecto-sp13_S_contig8279.19623.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8279.19623.1
Unique Nameprot_Ecto-sp13_S_contig8279.19623.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length400
Homology
BLAST of mRNA_Ecto-sp13_S_contig8279.19623.1 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 637 bits (1643), Expect = 1.710e-213
Identity = 363/399 (90.98%), Postives = 376/399 (94.24%), Query Frame = 0
Query:    1 MNSAAASNAFAKWETLEPAATSSSTKTERVSLAAPSLQPKLPSSQHQLQPPPTPNVLTGHGIDDSFVAAGGGFPRSPPLSREEPRPSKPIVAAAAVFAGSDSTRGERYAVDSGGSNGTIDYDGKERNTSPAGLAPFGTVDADTPARAHAALATAASGPQSLPQPQAPRALPTSRGGRNQDSEPSFWGERARPSDGGXXXXXXXXXXVAKDGDAEALLARLAGKAKQAAAVALSASAASGGMTPDPTARAAPTRRVTRNVKSSGVESITDATVRVRFSGDKGHLGAAIKRGTNGEECRDESTATAVGRQVPEVVAAAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKLRQEKESQKTRFERLRAQNDEIVKEMAGLKVKFGQSMQLLRKYQSIVQEG 399
            MNSAAASNAFAKWETLEPAATS STKTERVSLA PSL+PKLPSSQHQLQPPPTPNVLTG GIDDSFVAAGGGFPRSPPL REEPR SKP+VAAAAVFAGSDSTRGERYA DS GSNGT+DYDGKERNTSPAGL PFGTVDADTPARA AALATAA+GPQS+PQP+APRALP SRGG+NQDSEPSFWGERARPSDG XXXXXXXXX VAKDGDAEALLARLAGKAKQAAAVALSASAASGGMTPDPTARAAPT  VTRNVKS+GVESITDA VRVRFSGD GH+GAAI+R T GEECRDES ATAVGRQVPEV  AAAAGGVA+DGGARLAELC+EDKTKVARLMQDLVKLRQEKE QKTRFERLRAQN+ IVKEMAGLKVKFGQSMQLLRKYQSIVQEG
Sbjct:    1 MNSAAASNAFAKWETLEPAATSISTKTERVSLATPSLRPKLPSSQHQLQPPPTPNVLTGLGIDDSFVAAGGGFPRSPPLPREEPRASKPVVAAAAVFAGSDSTRGERYAADSSGSNGTVDYDGKERNTSPAGLTPFGTVDADTPARAPAALATAAAGPQSIPQPEAPRALPVSRGGQNQDSEPSFWGERARPSDGXXXXXXXXXXGVAKDGDAEALLARLAGKAKQAAAVALSASAASGGMTPDPTARAAPTGIVTRNVKSAGVESITDAAVRVRFSGDTGHVGAAIRRSTTGEECRDESMATAVGRQVPEV--AAAAGGVAIDGGARLAELCQEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKEMAGLKVKFGQSMQLLRKYQSIVQEG 397          
BLAST of mRNA_Ecto-sp13_S_contig8279.19623.1 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 492 bits (1266), Expect = 2.790e-160
Identity = 286/310 (92.26%), Postives = 295/310 (95.16%), Query Frame = 0
Query:   90 IVAAAAVFAGSDSTRGERYAVDSGGSNGTIDYDGKERNTSPAGLAPFGTVDADTPARAHAALATAASGPQSLPQPQAPRALPTSRGGRNQDSEPSFWGERARPSDGGXXXXXXXXXXVAKDGDAEALLARLAGKAKQAAAVALSASAASGGMTPDPTARAAPTRRVTRNVKSSGVESITDATVRVRFSGDKGHLGAAIKRGTNGEECRDESTATAVGRQVPEVVAAAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKLRQEKESQKTRFERLRAQNDEIVKEMAGLKVKFGQSMQLLRKYQSIVQEG 399
            +VAAAAVFAGSDSTRGERYA DSGGSNGT+DYDGKERNTSPAGLAPFGTVDADTPARA AALATAA+GPQSLPQP+APR LP SRGGRNQDSEPSFWGERARPSDGGXXXXXXXXX VAKDGDAEALLARLAGKAKQAAAVALSASAASGGMTPD TAR+APT  VTRNVKS+GVESITDATVRVRFSGDKGHLGAAIKRGT GE+CRDEST TAVGRQVPEV  AAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKLRQEKE QKTRFERLRAQN+ IVK+MAGLK KFGQSMQLLRKYQSIVQEG
Sbjct:    1 MVAAAAVFAGSDSTRGERYATDSGGSNGTVDYDGKERNTSPAGLAPFGTVDADTPARASAALATAAAGPQSLPQPEAPRTLPASRGGRNQDSEPSFWGERARPSDGGXXXXXXXXXVVAKDGDAEALLARLAGKAKQAAAVALSASAASGGMTPDLTARSAPTGTVTRNVKSAGVESITDATVRVRFSGDKGHLGAAIKRGTTGEDCRDESTVTAVGRQVPEV--AAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKQMAGLKDKFGQSMQLLRKYQSIVQEG 308          
BLAST of mRNA_Ecto-sp13_S_contig8279.19623.1 vs. uniprot
Match: A0A7S2SSJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSJ5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 7.330e-5
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0
Query:  320 GVAVDGGA-----RLAELCKEDKTKVARLMQDLVKLR-----------QEKESQKTRFERLRAQNDEIVKEMAGLKVKFGQSMQLLRKYQ 393
            G AVDG A     RL +LC  DK++VARL+  L+++            +E+ + ++R +RLR QNDEIV EMA L+ KFGQ++ L ++YQ
Sbjct:   44 GGAVDGRAKTKTARLTDLCAADKSRVARLIDQLLRVTTEHDKAVEDWGRERATFESRIQRLRKQNDEIVGEMAALRKKFGQTLTLAQQYQ 133          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8279.19623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9R0_9PHAE1.710e-21390.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS85_ECTSI2.790e-16092.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SSJ5_9STRA7.330e-543.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 333..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8279contigEcto-sp13_S_contig8279:1241..3405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8279.19623.1mRNA_Ecto-sp13_S_contig8279.19623.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8279 1241..4138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8279.19623.1 ID=prot_Ecto-sp13_S_contig8279.19623.1|Name=mRNA_Ecto-sp13_S_contig8279.19623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=400bp
MNSAAASNAFAKWETLEPAATSSSTKTERVSLAAPSLQPKLPSSQHQLQP
PPTPNVLTGHGIDDSFVAAGGGFPRSPPLSREEPRPSKPIVAAAAVFAGS
DSTRGERYAVDSGGSNGTIDYDGKERNTSPAGLAPFGTVDADTPARAHAA
LATAASGPQSLPQPQAPRALPTSRGGRNQDSEPSFWGERARPSDGGGKGG
GGGGGGVAKDGDAEALLARLAGKAKQAAAVALSASAASGGMTPDPTARAA
PTRRVTRNVKSSGVESITDATVRVRFSGDKGHLGAAIKRGTNGEECRDES
TATAVGRQVPEVVAAAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKL
RQEKESQKTRFERLRAQNDEIVKEMAGLKVKFGQSMQLLRKYQSIVQEGE
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