prot_Ecto-sp13_S_contig8277.19621.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8277.19621.1
Unique Nameprot_Ecto-sp13_S_contig8277.19621.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8277.19621.1 vs. uniprot
Match: A0A6H5K9M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M7_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 3.260e-28
Identity = 69/82 (84.15%), Postives = 72/82 (87.80%), Query Frame = 0 
Query:    1 MNDPSSASVTDSRMEAAADAPGVTAAPAXXXXXXXAPEADAVPATPVKAGAPDIEKQIVNAGPKADKPDDSKAKPEPKPQVS 82
            M+DPS A+VTDS MEAAADAPGVTAA  XXXXXXX  E  AVPATPVKAGAPDIEKQIVNAGPKADKPDDSK KPEPKPQ +
Sbjct:    1 MSDPSPAAVTDSSMEAAADAPGVTAAXXXXXXXXXXXEVVAVPATPVKAGAPDIEKQIVNAGPKADKPDDSKTKPEPKPQAT 82
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BLAST of mRNA_Ecto-sp13_S_contig8277.19621.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 4.050e-13
Identity = 36/38 (94.74%), Postives = 38/38 (100.00%), Query Frame = 0 
Query:   54 IEKQIVNAGPKADKPDDSKAKPEPKPQVSIAKLFSYAD 91
            +EKQ+VNAGPKADKPDDSKAKPEPKPQVSIAKLFSYAD
Sbjct:    1 MEKQMVNAGPKADKPDDSKAKPEPKPQVSIAKLFSYAD 38
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BLAST of mRNA_Ecto-sp13_S_contig8277.19621.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 2.570e-12
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:   54 IEKQIVNAGPKADKPDDSKAKPEPKPQVSIAKLFSYAD 91
            +E Q+VNAGPKADKPDDSKAKPEPKPQVSIAKLFSYAD
Sbjct:    1 METQMVNAGPKADKPDDSKAKPEPKPQVSIAKLFSYAD 38
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8277.19621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9M7_9PHAE3.260e-2884.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHL4_ECTSI4.050e-1394.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL5_ECTSI2.570e-1292.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8277contigEcto-sp13_S_contig8277:829..3959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8277.19621.1mRNA_Ecto-sp13_S_contig8277.19621.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8277 827..3959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8277.19621.1 ID=prot_Ecto-sp13_S_contig8277.19621.1|Name=mRNA_Ecto-sp13_S_contig8277.19621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MNDPSSASVTDSRMEAAADAPGVTAAPAVAAAPAPAPEADAVPATPVKAG
APDIEKQIVNAGPKADKPDDSKAKPEPKPQVSIAKLFSYAD
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