mRNA_Ecto-sp13_S_contig8273.19619.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8273.19619.1
Unique NamemRNA_Ecto-sp13_S_contig8273.19619.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5L1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U0_9PHAE)

HSP 1 Score: 528 bits (1359), Expect = 1.620e-186
Identity = 261/289 (90.31%), Postives = 269/289 (93.08%), Query Frame = 3
Query:  276 LPPPDPRHANMTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLMHGALTTFVLDLDPVNLDTSIDDVAEIARGTADVVVDGVGESAYVPPPTGAQIGTSSYSQKWRDWNQQQKDTNLENYLQQRRDTGE 1142
            LPP DPRHANMTIERLFSEG+I TGGFSYNHPQF REMAKF  +KVNGKPTWQKQPSGPSTL NNIVVTDHFRSLAPFLGP AKLCKPRPSTDRLF TKQRVQQ  KSGRRH DAKNAPWRVCVTVA+ +APK LKQLEIGM DASKAKGGGAVNPWQLQADGEPDARRFDCVTGSY VMDTVATGLDS+AHHQALVNKEL+L HGALTTFVLDLDPVNLDT IDDVAEIARGTAD V+DGVGESAYVPPPT AQ+GTSSYSQKWRDWNQQQK TNLENYLQQRRDTGE
Sbjct:   33 LPPTDPRHANMTIERLFSEGYIVTGGFSYNHPQFEREMAKFNGVKVNGKPTWQKQPSGPSTLHNNIVVTDHFRSLAPFLGPLAKLCKPRPSTDRLF-TKQRVQQSIKSGRRHHDAKNAPWRVCVTVANLSAPKGLKQLEIGMTDASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYHVMDTVATGLDSHAHHQALVNKELILKHGALTTFVLDLDPVNLDTFIDDVAEIARGTADAVIDGVGESAYVPPPTAAQMGTSSYSQKWRDWNQQQKYTNLENYLQQRRDTGE 320          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: D8LFC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC5_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 7.720e-114
Identity = 173/286 (60.49%), Postives = 202/286 (70.63%), Query Frame = 3
Query:  282 PPDPRHANMTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLMHGALTTFVLDLDPVNLDTSIDDVAEIARGTADVVVDGVGESAYVPPPTGAQIGTSSYSQKWRDWNQQQKDTNLENYLQQRRDTG 1139
            P DP++  MT ERLFSEGHIA G FSYNHPQFA E A F  +K++GK  WQ+QP GPSTL NN+ + D F SLAPFL P   LCK R ST RLF+ KQR QQYT SGRRHRD KN  WR+C+TV +P AP   K+LE+G+ADA  AKG  A NPWQL+ADG PD    DC TGSY +MD V TG  S+AHHQA+++K  L  HGA T FV+D DP++  T +DDV  IA GTAD V  GVG  AYVPPPT AQIG S  S +  DWN+  K+  LENY+Q RRD G
Sbjct:   92 PVDPQYERMTTERLFSEGHIAMGSFSYNHPQFAEEAAAFNGVKIDGKSVWQQQPCGPSTLHNNVTIIDRFPSLAPFLVPLDNLCKRRDSTVRLFV-KQRAQQYTTSGRRHRDGKNGRWRMCITVHNPGAPLGFKRLEVGVADARVAKGDQATNPWQLKADGTPDMECIDCTTGSYQIMDEVGTGTASHAHHQAIIDKNPLPQHGAPTMFVVDFDPISPHTFVDDVERIAEGTADKVKAGVGVPAYVPPPTQAQIGRSCGSTQTSDWNRLNKEKKLENYIQDRRDGG 376          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5K5U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U5_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 3.610e-88
Identity = 142/249 (57.03%), Postives = 170/249 (68.27%), Query Frame = 3
Query:  306 MTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLMHGALTTFVLDLDPVNLDTSIDDVAEIARGTADVVVDGVGESAYVPPPTGAQIGTS 1052
            MT ERLFSEGHIA G F+YNHPQFA E A F  +KVN KP  Q QPS PSTL  +IV+ D+F SL PF      LCKPRP T+RL                HRD KN PWR+C+T  DPAAP   K+ E+G+ADAS AKGGGA+ P QL+ D +PD+ RFDC  GSY +MD V TG +S+AHHQA+++K +L  H ALTTFV+DLDP++  T +DDV  IA+GT+  V  GVG  AYVP PT AQIG S
Sbjct:    1 MTTERLFSEGHIAIGSFAYNHPQFAEEAAAFNTVKVNRKPVRQTQPSSPSTLHKSIVIADYFSSLTPFSKQLEGLCKPRPKTNRL----------------HRDGKNGPWRMCITAHDPAAPPHTKRSEVGVADASNAKGGGALYPRQLKDDRKPDSVRFDCAAGSYHIMDKVGTGTNSHAHHQAIIDKSVLSTHEALTTFVIDLDPISPHTFVDDVENIAKGTSIEVKAGVGVPAYVPTPTQAQIGRS 233          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5J6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K4_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 1.520e-86
Identity = 128/185 (69.19%), Postives = 148/185 (80.00%), Query Frame = 3
Query:  306 MTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGP-SAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQ 857
            MT  R+F+EGHIATG FSYNHP F +E A F  +KV+GKP WQKQP GPSTL N++V+ D F SLAPFLGP   KLCKPRP+TDRLF+ KQR QQYT SGRRHRD KN PWR+CVT+ DPAAP   KQLEIG+AD SKAKG GAVNP+Q +ADG PD+RRFDC +GSY +MD VATG  S+A H+
Sbjct:    1 MTTARIFNEGHIATGSFSYNHPLFEKEAAAFNDIKVDGKPVWQKQPPGPSTLHNSVVINDRFPSLAPFLGPVEKKLCKPRPTTDRLFL-KQRAQQYTTSGRRHRDGKNGPWRMCVTIHDPAAPPHAKQLEIGLADGSKAKGDGAVNPFQTKADGTPDSRRFDCPSGSYHLMDEVATGTVSHASHK 184          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5KI01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI01_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 9.290e-85
Identity = 144/263 (54.75%), Postives = 168/263 (63.88%), Query Frame = 3
Query:  306 MTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLMHGALTTFVLDLDPVNLDTSIDDVAEIARGTADVVVDGVGESAYVPPPTGAQIGTSSYSQKWRDWNQQQK 1094
            MT  RLFS+GHIATG FSYNHPQFA+E   F  + + GK  WQ+QPSGPSTL NN+ + DHF SLAPFLGP  KLCK R STDRLF+ KQR QQY  SGRRHRD +N  WR+CVTV +P AP   K+LE+G+ADA  AKGG A+NPWQL+AD                                      LL  HGA  TFVLD DP++ +T IDDVA IA GTAD V  GVG SAYV P T  QIG S  S+K R +N+Q++
Sbjct:   86 MTTARLFSDGHIATGNFSYNHPQFAKEADAFNGVTIGGKRVWQRQPSGPSTLHNNVTIIDHFSSLAPFLGPLEKLCKLRDSTDRLFL-KQRAQQYITSGRRHRDGRNGLWRMCVTVHNPGAPPGFKRLEVGVADARVAKGGDAINPWQLKAD-------------------------------------NLLREHGAPATFVLDFDPIDPNTFIDDVARIAEGTADKVKAGVGVSAYVCPRTEEQIGKSCASEKMRAYNKQRE 310          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5K3Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q8_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 9.260e-80
Identity = 132/233 (56.65%), Postives = 151/233 (64.81%), Query Frame = 3
Query:  306 MTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLMHGALTTFVLDLDPVNLDTSIDDVAEIARGTADVVVDGVG 1004
            MT  RLF +GHIA   FSYNHPQFA+E   F  + + GK  WQ+QPSGPSTL N + + DHF SLAPFLGP  KLCKPR STDRLF+ KQR QQY  SGRRHRD KN  WR+CVTV +P AP   K+LE                   L+ADG PD    DC  GSY  MD V TG  S+AHHQ +++K LL  HGA TTFVLD DP++ +T IDDVA IA GT D V   VG
Sbjct:   86 MTTARLFGDGHIARSNFSYNHPQFAKEADTFNGVTIAGKQVWQRQPSGPSTLHNKVTIIDHFSSLAPFLGPLEKLCKPRDSTDRLFL-KQRAQQYITSGRRHRDGKNGLWRMCVTVHNPGAPPGFKRLE-------------------LKADGTPDMECIDCPAGSYHTMDEVGTGTASHAHHQEIIDKNLLREHGAPTTFVLDFDPIDPNTFIDDVARIAEGTVDKVKAAVG 298          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5KRD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD3_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 3.830e-57
Identity = 118/285 (41.40%), Postives = 152/285 (53.33%), Query Frame = 3
Query:  291 PRHANMTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLMHGALTTFVLDLDPVNLDTSIDDVAEIARGTADVVVDGVG-ESAYVPPPTGAQIGTSSYSQKWRDWNQQQKDTNLENYLQQRRDTGE 1142
            P + +MT ERL +EGH+ATG F  +H  FA+E  K   + + GK             R ++      RS                                             W +C+T+ DPAAP + KQLEIG  D SKAKGG A+NP++ + DG  DA  FDC + SY +MD V TGL  +AHHQA ++K LL +HGA TTFV D++P+N DT I DV  IARGTA  +    G ESA VPPPT  QIG SS  ++  DW++ QK+TNLE Y + RR  GE
Sbjct:   50 PEYEDMTTERLVAEGHVATGSFFIDHNHFAQEAEKSNVVTIGGK-------------RGDVTEMGKTRS-------------------------------------------GGW-MCITIHDPAAPSNFKQLEIGEVDGSKAKGGHAINPFRAKPDGTTDATTFDCPSPSYHIMDRVGTGLHFHAHHQAKIDKRLLDVHGAATTFVDDMNPINPDTFIQDVDVIARGTAGALGPNAGCESAPVPPPTDEQIGVSSGPEQTSDWHKLQKETNLEAYTEDRRAGGE 277          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5KU06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU06_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.080e-50
Identity = 87/144 (60.42%), Postives = 104/144 (72.22%), Query Frame = 3
Query:  291 PRHANMTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAK 722
            P +  MT ERLF+E H+ATG F  +H +FA+E  +F  + + GKP WQK+PSG STL N+I + +HF SLAP L P   LCKPRP T R F  KQR QQYTKSGRRHRD KNA WR+C+TV DPAA    K+LEIG+ADASK K
Sbjct:   39 PEYEEMTTERLFAECHVATGSFFIDHNRFAQEGERFNDVTIGGKPVWQKKPSGHSTLHNSIAIAEHFPSLAPLLIPLEALCKPRPGTARRF-KKQRAQQYTKSGRRHRDGKNAEWRMCITVHDPAALSLFKELEIGVADASKVK 181          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 7.000e-29
Identity = 72/203 (35.47%), Postives = 95/203 (46.80%), Query Frame = 3
Query:  291 PRHANMTIERLFSEGHIATGGFSYNHPQFAREMAKFVCLKVNGK----PTWQKQPSGPSTLRNNIVVTDHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAPWRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLM 887
            P +  MT ERLF+EGH+ATG F  +H +FA+E  KF  + + GK    P W+                                                               NA WR+ +T+ DPAAP +  QLEIG+ D SKAKGG A+NP++ + DG  DA  FDC + SY +MD V TG  S+AHHQA ++  LL M
Sbjct:   30 PEYEEMTTERLFAEGHVATGSFFIDHNRFAQEAEKFNDVTIGGKRATSPRWE---------------------------------------------------------------NAEWRMFITIHDPAAPSNFIQLEIGVVDGSKAKGGHAINPFRAKPDGSTDATTFDCPSPSYHIMDRVGTGHHSHAHHQAKIDTSLLAM 169          
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Match: D7G2V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V3_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.150e-6
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 1
Query:    1 MATSSNPRTPLREPKTKRNTGLDIFGLGSDDD-DFCTPPRVTLKEANT 141
            MA  SNPRT LREPK KR+TGLDIFGLGS+DD D    P V  +++ T
Sbjct:    7 MAIFSNPRTTLREPKRKRDTGLDIFGLGSEDDVDLTVTPSVGDEDSET 54          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8273.19619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L1U0_9PHAE1.620e-18690.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFC5_ECTSI7.720e-11460.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5U5_9PHAE3.610e-8857.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6K4_9PHAE1.520e-8669.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI01_9PHAE9.290e-8554.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q8_9PHAE9.260e-8056.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRD3_9PHAE3.830e-5741.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU06_9PHAE1.080e-5060.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7M5_9PHAE7.000e-2935.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2V3_ECTSI1.150e-662.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8273contigEcto-sp13_S_contig8273:3263..5718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1145
Hectar predicted targeting categoryother localisation
Exons3
Cds size963
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464096.738989-UTR-Ecto-sp13_S_contig8273:3262..33581681464096.738989-UTR-Ecto-sp13_S_contig8273:3262..3358Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8273 3263..3358 +
1681464096.750312-UTR-Ecto-sp13_S_contig8273:3507..35931681464096.750312-UTR-Ecto-sp13_S_contig8273:3507..3593Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8273 3508..3593 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464096.7610602-CDS-Ecto-sp13_S_contig8273:3593..36061681464096.7610602-CDS-Ecto-sp13_S_contig8273:3593..3606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8273 3594..3606 +
1681464096.7721992-CDS-Ecto-sp13_S_contig8273:4768..57181681464096.7721992-CDS-Ecto-sp13_S_contig8273:4768..5718Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8273 4769..5718 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8273.19619.1prot_Ecto-sp13_S_contig8273.19619.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8273 3594..5718 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8273.19619.1

>prot_Ecto-sp13_S_contig8273.19619.1 ID=prot_Ecto-sp13_S_contig8273.19619.1|Name=mRNA_Ecto-sp13_S_contig8273.19619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
MWTEAHRVDGQEEEEALLVEGEGGAERTSPQLPPPDPRHANMTIERLFSE
GHIATGGFSYNHPQFAREMAKFVCLKVNGKPTWQKQPSGPSTLRNNIVVT
DHFRSLAPFLGPSAKLCKPRPSTDRLFITKQRVQQYTKSGRRHRDAKNAP
WRVCVTVADPAAPKDLKQLEIGMADASKAKGGGAVNPWQLQADGEPDARR
FDCVTGSYPVMDTVATGLDSYAHHQALVNKELLLMHGALTTFVLDLDPVN
LDTSIDDVAEIARGTADVVVDGVGESAYVPPPTGAQIGTSSYSQKWRDWN
QQQKDTNLENYLQQRRDTGE*
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mRNA from alignment at Ecto-sp13_S_contig8273:3263..5718+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8273.19619.1 ID=mRNA_Ecto-sp13_S_contig8273.19619.1|Name=mRNA_Ecto-sp13_S_contig8273.19619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2456bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8273:3263..5718+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCACATCCAGCAATCCCCGCACTCCACTCAGGGAGCCCAAGACGAA GAGGAACACCGGCCTGGACATCTTCGGACTGGGCTCCGACGATGATGTAA GATAATCAGCGTGGTGTGATAGACATGCTTTTCTTGAGATTTCAGGTCCA TTGTGAACGCGAGCCTAGTCACACACACCCAGGCATAAACACAACCACAG GATGATACACCCTCTTCCCACCCATGCATCCGTCCGTGATCACAGGACTT TTGCACTCCCCCAAGGGTGACGCTAAAAGAGGCTAATACAACACGTCTGA CCCCACGGTCCCCGAACGTAGCAGCGTCACCATGTGGACCGAAGGTGAGA GACGATCAGTTCCCACCCGATTTACGACTTCTGATTGCGATGCCCTCCCT AGCCTGCTTCATTTACGCCGTCTCATCGATCAACATGGAGTGCGCCGACG CTTTCTTCTTTCCCACCACAAGTTCGCCTTCCGTCATGGGTTACATGCAG ACATGATAATGTGCTTTCAACATGGTGCCGACACACACGGAAATAGAACA GAAACGTTCTCGTGCAAGCAGATAGTAGGTAGGCTAAAAGTTGCGCGTTT AGTTTGTAGTTTGAGTCCAGTCGAACAGAGTGACAATAATGCGGTTGCAG GATATGGCTCTCCCGTGTTTGTGAATGTCGACACTCATCCACTCCTTCGG AACTGCGACCATTTCGACAACCCGTCGCACCGCGGCAGTCATCCGGGAAA TCAGGGGAGAAGCGCCGTCTGAGCCTCGGTCCCGAACAGAGGGAGGAGGA GGAGGAGGAAGAAGAAGAAGACGATGAAGAGGAGGAGGAGGAGGAGGAGG AGGAGGCAAGTAATGAAACATAGTGTACCTGATGACTTGTATCAACCTTA CCCCTTGGGGTTGCAACTTGGCATTTACCCGGACCGATATTCAGGGTTGG TGGGGGGTGCCGAACGGGACATCATATATAGACGAATTCGCACGCATAAT CCGGCTCAAACTATCCAACACGCCTCCCGAAGGCATTTCCATTTTCAATC GCTATCGCCCCCCCCCCCTCACACTCTCCACACATTCACTCTTCGCCGTG GATCTGACACCAAAAGAATGAACGCCGTTATTTTTGTGACTCGAAAGGGA AAGGTTTGCCGTTAAACTTACGTAGTGTCTCTCGACGAACACATAAAAGT GTAAGTTGGGAACACCGAAAGGAAACAGATATATGCGGAACTGATTATAA CGGTCTCTACACACGACGTTGTCATACTCGTCGCGCTCCCTCCGTCCGTG CAGACTGCCCGAGAGTCAGCGAGACCCCTTCATATCGTCGATCCTACCCG GGCGTGACAGCTGCACTCCATGTCGGCAAGATTAGTGTCCTCGTCAAGGT TTTCAACCAACAAGTTTCTCATCATCACAATTCTGTCGCACGTGTTCTCG GTTGCCCCTTTTATCCCTCTCAACAGCCTCTCGCGTCGAAGGGCGACAAG AGAAAGCCCACCGCGTCGACGGGCAAGAAGAGGAAGAAGCCTTACTCGTC GAAGGCGAAGGAGGGGCCGAGCGAACGTCGCCACAGCTACCCCCCCCGGA CCCCCGGCACGCGAACATGACGATTGAACGCCTCTTCAGCGAGGGCCACA TCGCCACCGGCGGCTTCTCGTACAACCACCCTCAGTTCGCGAGGGAGATG GCCAAGTTCGTCTGCTTGAAAGTGAACGGGAAACCGACCTGGCAGAAGCA ACCCAGCGGCCCCTCGACGTTGCGCAACAACATCGTCGTCACCGACCACT TCCGTTCGTTGGCCCCGTTCCTGGGACCGTCGGCGAAGTTGTGCAAGCCA AGGCCGTCGACCGACCGCCTGTTCATCACCAAGCAGAGGGTTCAACAGTA CACCAAGTCCGGCCGGCGGCACCGTGACGCCAAGAACGCGCCGTGGCGGG TGTGCGTCACCGTCGCCGACCCGGCTGCACCGAAAGACCTCAAGCAGCTG GAGATTGGGATGGCGGACGCCAGCAAGGCGAAGGGTGGTGGGGCCGTCAA CCCGTGGCAGCTTCAAGCCGATGGCGAACCGGATGCCAGGCGGTTCGACT GCGTGACTGGGTCCTACCCCGTCATGGACACCGTGGCCACCGGCCTCGAC TCATACGCGCATCACCAGGCCCTCGTCAACAAGGAGCTCCTTCTGATGCA CGGAGCGCTCACCACGTTTGTGCTCGACCTCGACCCGGTCAACCTCGACA CGTCCATCGATGACGTCGCAGAGATCGCACGGGGTACTGCGGACGTGGTG GTAGACGGCGTAGGCGAATCGGCGTACGTGCCACCTCCGACAGGGGCACA GATCGGCACCTCCAGCTATTCGCAGAAGTGGAGGGACTGGAACCAGCAGC AGAAAGATACAAATCTGGAGAACTACCTCCAACAACGGCGAGATACAGGT GAATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8273:3263..5718+

>mRNA_Ecto-sp13_S_contig8273.19619.1 ID=mRNA_Ecto-sp13_S_contig8273.19619.1|Name=mRNA_Ecto-sp13_S_contig8273.19619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=963bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8273:3263..5718+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGACCGAAGCCCACCGCGTCGACGGGCAAGAAGAGGAAGAAGCCTT
ACTCGTCGAAGGCGAAGGAGGGGCCGAGCGAACGTCGCCACAGCTACCCC
CCCCGGACCCCCGGCACGCGAACATGACGATTGAACGCCTCTTCAGCGAG
GGCCACATCGCCACCGGCGGCTTCTCGTACAACCACCCTCAGTTCGCGAG
GGAGATGGCCAAGTTCGTCTGCTTGAAAGTGAACGGGAAACCGACCTGGC
AGAAGCAACCCAGCGGCCCCTCGACGTTGCGCAACAACATCGTCGTCACC
GACCACTTCCGTTCGTTGGCCCCGTTCCTGGGACCGTCGGCGAAGTTGTG
CAAGCCAAGGCCGTCGACCGACCGCCTGTTCATCACCAAGCAGAGGGTTC
AACAGTACACCAAGTCCGGCCGGCGGCACCGTGACGCCAAGAACGCGCCG
TGGCGGGTGTGCGTCACCGTCGCCGACCCGGCTGCACCGAAAGACCTCAA
GCAGCTGGAGATTGGGATGGCGGACGCCAGCAAGGCGAAGGGTGGTGGGG
CCGTCAACCCGTGGCAGCTTCAAGCCGATGGCGAACCGGATGCCAGGCGG
TTCGACTGCGTGACTGGGTCCTACCCCGTCATGGACACCGTGGCCACCGG
CCTCGACTCATACGCGCATCACCAGGCCCTCGTCAACAAGGAGCTCCTTC
TGATGCACGGAGCGCTCACCACGTTTGTGCTCGACCTCGACCCGGTCAAC
CTCGACACGTCCATCGATGACGTCGCAGAGATCGCACGGGGTACTGCGGA
CGTGGTGGTAGACGGCGTAGGCGAATCGGCGTACGTGCCACCTCCGACAG
GGGCACAGATCGGCACCTCCAGCTATTCGCAGAAGTGGAGGGACTGGAAC
CAGCAGCAGAAAGATACAAATCTGGAGAACTACCTCCAACAACGGCGAGA
TACAGGTGAATAA
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