mRNA_Ecto-sp13_S_contig827.19616.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig827.19616.1
Unique NamemRNA_Ecto-sp13_S_contig827.19616.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A6H5LAB2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB2_9PHAE)

HSP 1 Score: 1105 bits (2857), Expect = 0.000e+0
Identity = 585/652 (89.72%), Postives = 592/652 (90.80%), Query Frame = 3 
Query:  408 AAAAVCDLPEPLEAFTSTSDEPHGCSYCAGTPSSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLGQFLEPSASRVHNPRLPHRSASHHLDKDSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAEXXXXXXPKNGDXXXXAKGGGRPTRRPSFRSPQKKSPKKNGKPFPVQRSPLGKTQPVPASQELHVSPKSGRSRARTNDNATAGGGPRTHSLLPERDLGPRRATWSESSGRDSAASREPLPANEGLAVEMRADADPSHTRRVVTDEGGSRRRRELGSGGVGVGVERGVVAERQEREGGRGTPPVARLLFGEDDHQSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGGAREGAGGNGQPADTGTLESAAAVATAEENSLQVQGQRGGGMSARENNGDNSAAGRRTPSAARTES 2363
            AAAAV DLPEPLEAFTSTSDEPHGCS C  TPSSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYL Q LEPSASRVHNPRL HRSASH LDKDSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHA ERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLG VDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEI PQ LPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAE      PKNGD    AK    PTRRPSFRS +K  PKKNGKP  VQRSP GKTQPVPA+QELHVSPKSGRSRARTNDNATAGGGPR HSLLPERDLGPRRATWS SSGR SAASR PLPANEGL V +R DA   HTRRVV D+GGSRRRRELGSG VGVG ERGV  ERQEREGGRG+PP ARLL GED HQSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGG AREGAGGNGQ ADTG LESAA VATAE N+L+ QGQ GGGM A ENNGDNSAAGRRTPSAART S
Sbjct:    3 AAAAVWDLPEPLEAFTSTSDEPHGCSCCEDTPSSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLRQLLEPSASRVHNPRLLHRSASHQLDKDSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGAVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIDPQLLPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAEATVAATPKNGDDGGGAKXXXXPTRRPSFRSXEKXXPKKNGKPSSVQRSPFGKTQPVPAAQELHVSPKSGRSRARTNDNATAGGGPRAHSLLPERDLGPRRATWSGSSGRGSAASRVPLPANEGLTVAIREDAYRPHTRRVVADQGGSRRRRELGSGRVGVGAERGVETERQEREGGRGSPPAARLLLGEDHHQSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGEAREGAGGNGQRADTGALESAAVVATAEGNNLRSQGQHGGGMPALENNGDNSAAGRRTPSAARTGS 654
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: D7G7T8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T8_ECTSI)

HSP 1 Score: 628 bits (1619), Expect = 3.870e-214
Identity = 377/651 (57.91%), Postives = 386/651 (59.29%), Query Frame = 3 
Query:  411 AAAVCDLPEPLEAFTSTSDEPHGCSYCAGTPSSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLGQFLEPSASRVHNPRLPHRSASHHLDKDSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAEXXXXXXPKNGDXXXXAKGGGRPTRRPSFRSPQKKSPKKNGKPFPVQRSPLGKTQPVPASQELHVSPKSGRSRARTNDNATAGGGPRTHSLLPERDLGPRRATWSESSGRDSAASREPLPANEGLAVEMRADADPSHTRRVVTDEGGSRRRRELGSGGVGVGVERGVVAERQEREGGRGTPPVARLLFGEDDHQSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGGAREGAGGNGQPADTGTLESAAAVATAEENSLQVQGQRGGGMSARENNGDNSAAGRRTPSAARTES 2363
            A AVCDLPEPL+AFTST DEPHGCS C  TPSSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYL Q LEPSASRVHNPRL HRSASH LDKDSEGA+VIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHA ERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVY+KLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDL+ LQDEIAPQ                                                                                                                                                                                                                                                   AVMRDLGVPLGEQER VQGG  REGAGGNGQ A+TGTLE+AAAVA AEENSL+VQGQ+GGG+ A E NGDNS  GRRTPSAAR ES
Sbjct:    6 AVAVCDLPEPLQAFTSTLDEPHGCSCCEDTPSSQNMVCLPPHVFAFCIVMSALVSAIVVANQRIYGAIREYLRQLLEPSASRVHNPRLLHRSASHQLDKDSEGANVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYDKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEIAPQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVMRDLGVPLGEQERAVQGGEEREGAGGNGQRAETGTLEAAAAVAAAEENSLRVQGQQGGGVPALEKNGDNS--GRRTPSAAREES 411
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A835YIT9_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIT9_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.230e-50
Identity = 97/218 (44.50%), Postives = 141/218 (64.68%), Query Frame = 3 
Query:  885 DAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQK----------------------IRILGSDLT-VLQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLVDAIN 1469
            D IL+EPQ  F+ I+++FP+ + GR R GH+VVYEK+G + M+ L  + GVT+PMLLRH++F  EY++RV++P   AQ I I+D++ + +  L G   E+ K  AQ A  HYVERC++TF++N+PAWF L +  +SPF+  RT++K                      +R+LGS+   VLQ EI P  +P+EYGG+ T P+ +SPEE NL  +V AIN
Sbjct:   96 DMILSEPQPMFNIIKQHFPAFIYGRGRKGHVVVYEKVGSIHMKELAHQ-GVTLPMLLRHYVFSMEYLWRVVEPRGDAQLITIQDVQGIGLSDLTGMALEFAKGAAQTASKHYVERCYRTFIINSPAWFPLLWAAISPFVPLRTKKKASALDCPCGNCLSNHVATASIHVRVLGSNYRPVLQQEIEPDMIPLEYGGSCTTPLHESPEEANLSAMVTAIN 312
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A7S2V2B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B7_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.600e-49
Identity = 92/223 (41.26%), Postives = 146/223 (65.47%), Query Frame = 3 
Query:  789 IPARYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLV 1457
            +P RY+++  G+ + A +RW  T+KWRKEN +D +L + Q  FH I++++P  +  R R GH V Y+KLG + +  L++  GV V  LL H+IF SEY+++V++P D+   + +ED++ +   +L G + E++K V+++   HY ER +KTF++NAP WF   FRVV+P L  +T +KI ILG+DLT + + I  + +P EYGG ++  +  S EE  LR LV
Sbjct:  163 VPLRYLKSCKGDVEEAQKRWNTTVKWRKENGVDDVLQKAQPHFHTIKKWYPHFIHSRDREGHPVYYDKLGEIKVEKLQQN-GVDVEELLEHFIFHSEYLWKVVEPDDNFLMVAVEDVQGINAFSLQGVVFEFIKHVSKMFSDHYCERSYKTFIINAPGWFAWIFRVVAPLLDPKTTEKISILGTDLTEMHEAIGIENVPKEYGG-LSVGLGYSEEEEELRCLV 383
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A6H5JH73_9PHAE (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH73_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.300e-43
Identity = 93/239 (38.91%), Postives = 147/239 (61.51%), Query Frame = 3 
Query:  789 IPARYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVL-----QPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSD-LTVLQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAE 1487
            IP RY+    G+   A  RWKAT++WRKEN++D IL  PQ  FH+ R+ FP  + GRSR G  V++E++G VD+     +L + + +L  +++F++E ++R++        D AQ I +ED+  VR   L  K+   ++A+    + HYVERCHK++++NAP  F   +RVVS  L  RTR KI ILG++ L  +++EI    +P EYGG+    + DS +ER ++ LV  +N+ A+ +
Sbjct:  149 IPERYIVGCGGDVAEAGRRWKATVEWRKENKVDEILETPQPHFHECRQVFPVFLHGRSRKGMPVLWERIGKVDLAKAN-ELELPLSVLTPNYVFLNECVWRLILDRGENDNDDAQFITVEDVAGVRPWHLTPKVLSVLRALTGTMKAHYVERCHKSYIINAPRAFTALWRVVSAMLDTRTRAKISILGTNYLEEMKEEIDISQIPPEYGGSSGRAIDDSDDERKIQALVALLNSAAEGQ 386
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A485K5A0_9STRA (Aste57867_436 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5A0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.130e-43
Identity = 85/234 (36.32%), Postives = 140/234 (59.83%), Query Frame = 3 
Query:  768 PLALEHKIPARYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIAPQF----LPVEYGGTMTEPVSDSPEERNLRRLV 1457
            P+  E     R++ A  G+E+    RW+AT +WR+EN ID +L+EPQ  F  I++ +P +  G+S+ GH V YE+LG VD +TL+ K G+ +  LLRH++F++E++++VL+P+DS + I + D+++     L G +  +++     A  HY ER  +  V+N P WF +++R +SP +   T+ KIRI  S  +  +DE+        LP  YGGT    + +S EE+ L + V
Sbjct:   21 PVIEEIPFSPRFIAAEKGDEEKGRHRWEATRQWRRENNIDGLLHEPQPHFDIIKKNYPQYFHGKSKNGHCVYYERLGYVDFKTLK-KSGLNMDQLLRHYMFITEFLWKVLEPSDSGRSITVLDVENFGFYDLTGDVTSFIRQAMAFAAAHYPERSAQIIVINVPGWFYMTWRAMSPMIDPVTKAKIRICNSSTS--RDELLAAIDLDQLPSNYGGTSCA-LGESDEEKRLAQHV 250
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A7S3Y7R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7R1_HETAK)

HSP 1 Score: 173 bits (438), Expect = 6.360e-42
Identity = 93/251 (37.05%), Postives = 143/251 (56.97%), Query Frame = 3 
Query:  708 DSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSD-LTVLQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLV 1457
            D EG   + AA     AAA P A    +P RY+R   G+ + A  RW  TL+WR+E  +D IL+EPQ +F  I++Y+P     R R G +  YE++G  D+  +R + GVT+  L+RH++FVSE+++R ++  D AQ I I D++        G  +E+ +  + + + HYVER +K FV+NAP WF + ++VV P L   T++KI I G      L   + P+ +P EYGGT  +   +S  E+ +   V
Sbjct:  137 DPEGGVPLPAA----AAAAGPTAGGAALPDRYIRGCDGDLEEARRRWALTLRWRREQNVDGILDEPQPYFFVIKKYYPHFTYKRGRNGCVTYYEQVGRADIEAMRAR-GVTIAALVRHYVFVSEFLWRRIEADDDAQAITIMDIEGCGFSQFKGDTKEFFQQCSSVIQSHYVERSNKIFVINAPGWFNMIWKVVRPMLHENTQRKISICGKGRYEELLAYVGPENVPAEYGGTCRDAFYNSELEKPMHDFV 382
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A6G0WJQ6_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJQ6_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.520e-41
Identity = 85/229 (37.12%), Postives = 138/229 (60.26%), Query Frame = 3 
Query:  798 RYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIAP---QFLPVEYGGTMTEPVSDSPEERNLRRLVDAINAN 1475
            R++ A  GN +   +R++ATLKWR+EN ID +L EPQ  FH I++ +P +  G+S+ GH V YE+LG VD +TL+ K G+++  LL H+++++E+++++L+P+DS + I + D+ +     L G +  +++     A  HY ER  +  V+N P WF  ++R +SP +   T+ KIRI  S  T  Q+ +A      LP  YGGT    + +S EER L + V+    N
Sbjct:   32 RFIAAEKGNLEKGRQRYEATLKWRRENRIDTLLYEPQPHFHIIKQNYPQYFHGKSKNGHRVYYERLGYVDFKTLK-KSGLSMDQLLHHYMYITEFLWKILEPSDSGRSITVLDVANFGFFDLTGDVTSFIRQAMAFAGEHYPERSAQIIVINVPGWFNATYRAMSPLIDPVTKAKIRICTSS-TATQELLAAIDIDQLPSNYGGTSCA-LGESEEERILAQHVERYLTN 257
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A024USX5_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USX5_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.710e-41
Identity = 81/230 (35.22%), Postives = 141/230 (61.30%), Query Frame = 3 
Query:  798 RYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRIL--GSDLTVLQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLV-DAINANA 1478
            R++ A  GN +   +R+++TL WR++N ID +++EPQ  FH I++ +P +  G+S+ GH V YEKLG V+ + L+ K G+++  LLRH+++++EY+++VL P+D+ + I + D+++     L G +  +++     A  HY ER  + +V+N PAWF +++R +S  +   T+ KIR+   G+    L   I    LP  YGGT    + +S EE+ L + V D ++A A
Sbjct:   28 RFIAAEKGNAEKGRQRYESTLSWRRDNRIDTLIDEPQVHFHLIKKNYPQYFHGKSKNGHRVYYEKLGSVNFKALK-KSGLSMDQLLRHYMYITEYLWKVLDPSDNGRSITVFDVENFGFYDLTGDVTSFIRQAMAFAGEHYPERSAQIYVINVPAWFHITYRAMSAMIDPVTKAKIRVCTSGAATEELLASIDADQLPSNYGGTSCA-LGESDEEKMLAKHVNDRLSATA 255
[Close]
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Match: A0A3R6Z8R0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z8R0_9STRA)

HSP 1 Score: 167 bits (422), Expect = 6.470e-40
Identity = 81/225 (36.00%), Postives = 136/225 (60.44%), Query Frame = 3 
Query:  798 RYVRAFCGNEKHASERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTV--LQDEIAPQFLPVEYGGTMTEPVSDSPEERNLRRLVDAI 1466
            R++ A  GN +    R+++TL+WR+EN +D +L EPQ  FH I++Y+P +  G+S  GH V YEK+G +D++ ++   G+T+  LLRH+++++EYM+ +L+P+DS + + + D+  +    LAG +  +V+        +Y ER  + F+VN P WF + + VVSP +   T++KIRI         L   IA   LP +YGG+  + + +S EE  L + VD +
Sbjct:  321 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAA-GLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGGSSVK-LGESDEEVALAKYVDQV 543
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig827.19616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAB2_9PHAE0.000e+089.72CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D7G7T8_ECTSI3.870e-21457.91CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YIT9_9STRA2.230e-5044.50CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2V2B7_9STRA4.600e-4941.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5JH73_9PHAE1.300e-4338.91CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
A0A485K5A0_9STRA5.130e-4336.32Aste57867_436 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A7S3Y7R1_HETAK6.360e-4237.05Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6G0WJQ6_9STRA1.520e-4137.12CRAL-TRIO domain-containing protein n=1 Tax=Aphano... [more]
A0A024USX5_9STRA6.710e-4135.22CRAL-TRIO domain-containing protein n=2 Tax=Aphano... [more]
A0A3R6Z8R0_9STRA6.470e-4036.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig827contigEcto-sp13_S_contig827:9512..16674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score630.6
Seed ortholog evalue8.4e-178
Seed eggNOG ortholog2880.D7G7T8
Model size3253
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.macromolecule localization
EggNOG OGsKOG1471@1,KOG1471@2759
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-06_000330.1
Cds size1974
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig827.19616.1prot_Ecto-sp13_S_contig827.19616.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig827 9904..15787 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464096.4514494-UTR-Ecto-sp13_S_contig827:9511..99031681464096.4514494-UTR-Ecto-sp13_S_contig827:9511..9903Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig827 9512..9903 +
1681464096.5791352-UTR-Ecto-sp13_S_contig827:15787..166741681464096.5791352-UTR-Ecto-sp13_S_contig827:15787..16674Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig827 15788..16674 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464096.466697-CDS-Ecto-sp13_S_contig827:9903..100231681464096.466697-CDS-Ecto-sp13_S_contig827:9903..10023Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 9904..10023 +
1681464096.4761095-CDS-Ecto-sp13_S_contig827:11053..112751681464096.4761095-CDS-Ecto-sp13_S_contig827:11053..11275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 11054..11275 +
1681464096.4856327-CDS-Ecto-sp13_S_contig827:11680..118951681464096.4856327-CDS-Ecto-sp13_S_contig827:11680..11895Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 11681..11895 +
1681464096.5055478-CDS-Ecto-sp13_S_contig827:12440..125481681464096.5055478-CDS-Ecto-sp13_S_contig827:12440..12548Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 12441..12548 +
1681464096.5185165-CDS-Ecto-sp13_S_contig827:12996..130961681464096.5185165-CDS-Ecto-sp13_S_contig827:12996..13096Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 12997..13096 +
1681464096.529991-CDS-Ecto-sp13_S_contig827:13475..136941681464096.529991-CDS-Ecto-sp13_S_contig827:13475..13694Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 13476..13694 +
1681464096.5392778-CDS-Ecto-sp13_S_contig827:14120..143871681464096.5392778-CDS-Ecto-sp13_S_contig827:14120..14387Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 14121..14387 +
1681464096.5499148-CDS-Ecto-sp13_S_contig827:14741..154371681464096.5499148-CDS-Ecto-sp13_S_contig827:14741..15437Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 14742..15437 +
1681464096.5606103-CDS-Ecto-sp13_S_contig827:15760..157871681464096.5606103-CDS-Ecto-sp13_S_contig827:15760..15787Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig827 15761..15787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig827.19616.1

>prot_Ecto-sp13_S_contig827.19616.1 ID=prot_Ecto-sp13_S_contig827.19616.1|Name=mRNA_Ecto-sp13_S_contig827.19616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=658bp
MTRTAAAAAVCDLPEPLEAFTSTSDEPHGCSYCAGTPSSQNMVCLPPHVF
AFCIVMSALVSAIVVANQRIYGAIREYLGQFLEPSASRVHNPRLPHRSAS
HHLDKDSEGAHVIEAAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHASE
RWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEK
LGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMK
DVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVS
PFLSARTRQKIRILGSDLTVLQDEIAPQFLPVEYGGTMTEPVSDSPEERN
LRRLVDAINANADAEATAAATPKNGDGGGGAKGGGRPTRRPSFRSPQKKS
PKKNGKPFPVQRSPLGKTQPVPASQELHVSPKSGRSRARTNDNATAGGGP
RTHSLLPERDLGPRRATWSESSGRDSAASREPLPANEGLAVEMRADADPS
HTRRVVTDEGGSRRRRELGSGGVGVGVERGVVAERQEREGGRGTPPVARL
LFGEDDHQSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGGAREGAGGN
GQPADTGTLESAAAVATAEENSLQVQGQRGGGMSARENNGDNSAAGRRTP
SAARTES*
back to top

mRNA from alignment at Ecto-sp13_S_contig827:9512..16674+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig827.19616.1 ID=mRNA_Ecto-sp13_S_contig827.19616.1|Name=mRNA_Ecto-sp13_S_contig827.19616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7163bp|location=Sequence derived from alignment at Ecto-sp13_S_contig827:9512..16674+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAACACACACGTATGCGAGCAGCAGTGCAACCCCCTGCTCCACGCGCCGC
CTTATCAGCTCTTGGGAGGAAGTAGCATTGAGATTGTGGTAGGACTCTTT
GTTTACGTGGAGTCGTCGCGGGGATCAGGCGTCACCTTTCACCTGTTTTC
CGGGCAAAAGCTAAAAGCATCCGCTGCATCAACACAATCGTCCGACGTGT
GGGGTAGATAGCACAGCAGACTTCAACTCAAGGTCTCATCCCAGCCACTG
CTGTTGTGTCAAAGCCGCACGGCCGGGAGGTAGCCCCTACCATAAACATT
CCCTGGTCTCTTCTCCAGCCACCCACACAAGAAGAGCGGAGAGGTTTTGC
TTCCACCTCTGCCACTGGCCTACCGCAGGCGAACGAAATGCAATGACGCG
CACAGCTGCTGCAGCTGCAGTCTGTGACCTTCCCGAGCCCCTGGAGGCAT
TCACGAGCACTTCCGATGAGCCTCACGGCTGCAGCTACTGCGCGGGTACT
CCTTCCTCTCAGGTGAGTCACATTACAGTAGTTCAGACGGTAATATTGTG
CAGAGTAGGCTGGCTCTCTCTCTCTCTCTCCTCTGTCTCCCTCTCTCCCT
CTCTGTCTACCGTCCACTGGGTAGCGGTAACTTCTTGCGTGTCGTCTGTT
GTAAGGAGTTTGCTAAGAGCTTGAAACATCAACATCTCCTTCTTGAGCGT
GCTCGACGTTTTCGGGGGCAATTTCACAGCAGTTTTACTGCAGCTTCTTT
TACTGCAGCTACATCTAAAACAGAGAAATGTGTGCATATATATGCAGTAG
TCATACCAATCTACAGCACACAACAGGCTTTATGGGATGGGCGACACGAA
TTGGTTTGAACGAGAGTGTTACAGCAGTAGTGTTCATCGTTTTGGCCGGA
AGCACGACAGAAACTACTTGGGGAAATCGGGGACAGATTCTGTGCGGGGA
AAGAGGGGAATTGTTATCAAACGAAAGCAGCATGCAGTGCTGCACGAAAG
GAAACTGAACTCTATTGGTCGCGTGAGAAAAAAATGGTTGATTGCCGTTG
TCTGGACTGAGAGACATTTGCCTGGACTGCTGTGTGCACCCTTCAAAACA
CGCGACAGCAGTTAAAGTGAAGGGGGCGTTAAGGAGTCATTTTCGATCGC
TTCCCTCCAGCGCACAAGGAAAACCGGATTTATTGCGAAATTTCCGCCAA
AACTGATCGAGAAAGGAGAGAGAAAACGCCTGCTAACCGGAGAAGAGAGT
TCCTCCATGCCTGGGTTCGCGGGGAAAGCAGCATCCCCACTTGAGCCTGT
GACTATTAGTCTAAATGTCCTCGATACCATTCTTCGCCAGCTAAGGCAGG
CGAACAGAAACGGGGTAGAAAGATGCTCCCATAAAGGTCGATTTATTTAG
TTCCAAAGAGGTTCGTTCCCATGTGGAACCTACCAGACACCAGACTTACG
GTAAGCCCAACCAATACGTCCCCCTCACCCCCCGCTGATAACGTTTTCCA
CTCTGCCTTGCTACTGCGCGCACTTGCTGCCCCTGTGTTCAGAACATGGT
CTGCCTGCCGCCCCACGTGTTCGCTTTCTGCATCGTGATGTCTGCCTTGG
TTTCGGCTATCGTGGTGGCGAACCAACGCATCTACGGGGCTATCCGAGAA
TACCTTGGGCAATTCCTCGAGCCATCTGCGAGCAGGGTGCACAACCCGCG
CTTGCCGCACCGAAGCGCATCCCATCACTTGGACAAGGATTCGGAAGGGG
CACACGTCATCGAGGTGGGCACGGCTCGGTAGATAGATTGGTAACCATCA
TCAACGAACAATGCCTAAAGGTTGGACGATGCTGTGGAGGCTCTGTTGAG
CATATCGCTCTGGTATTTCGTCACAGACTCTAGACCCGTGGAGGCCGCTG
CCCATGGCGCTGATTTTTTTAGGCTTTGGCCGTGCCATATAAGAAGACAG
GAAGACTGTAGCGTGAGCCATCGCTCCTCGTAGCATGCGCTACAAGACTT
CTGTCACAGATTCCACAAAGGCATGCGTTGGACTACTGCTGTTGTTTGGC
TTTGGGCACTTCGCAGTTATGATGGCATCATCGCTAGGACTGAAAACTAC
ATCCCGCGACCCACCGAACGGAACACCTCACACCACGTCCCCCCATCCAC
CGAACGGAACACCACACAGGCTGCCGAGGCTATGGACCGCGCCGCCGCCG
CACCCCTAGCGCTCGAACACAAGATACCTGCTCGCTACGTGCGGGCGTTC
TGCGGCAACGAGAAGCACGCGTCGGAGAGGTGGAAAGCCACCCTCAAGTG
GCGCAAGGAGAACGAGATAGACGCCATCCTCAACGAGCCTCAACAGTTCT
TCCACGACATCCGACGCTACTTCCCGAGTCACATGTAAGCCAACCGGGTT
TTGCGTCTTCTGCCGCGTTTTTTTTTTTAGGTGTCTCTGCTGGGTGTGGT
CGTGCTCATCTTGCTGTTCGTGCTGGATGGGGTTAAGCCATGCCACAGGT
GTGCTTACAGAGAGCTGCATGAGTTATGTACAAAGAAGCCTGCACTTGTA
TGAAGGAAAACTTTTGGCAGTCTTGCATCGGCGTTTTCATGAGTACTACC
TCTGCGTGTGTTTTTTTTCGTGTTTGGTGTTTTACACGTCGCTCGTTTTT
TGTCACGATGACACGATGTTGGTTGGCATTGACCAGACAGAGAAACCAAA
ACTTTCTCGAAGACAGGATTCAACTGATGATGACATCGTGTGGGCGGTAG
TATACGTGGATCCCACAAGCTGCATTCGTTTGAGGAAGCGTCGGGACGCG
AGCTCCTGCCGGCGATGGGAAAAAACGTTAAGACGATGAGAAAATAACAG
GAATGGGTTTTGCACTGATGCCAATCCCACGCTTTGCCGGTGCGTGCTGT
GTTGCTTGTGGTGCTCTTGTGTTCTCCAGGAGCGGAAGGAGCAGAGGGGG
GCACATTGTGGTGTACGAGAAGCTTGGAGGTGTCGACATGCGGACACTTC
GGAGAAAACTAGGGGTGACCGTGCCAATGCTCCTCAGGTAACTAGTACTT
CTGGTATTGAAGTGTATCATGCGCCGAAAGACAGCTCGTGTACACAGCAG
CAGCCGTCTTTTCTTGTAGGTGATGTTTCGACCATCACGGGCTGTTCGTA
CCCATCGTGCCGTTACAACCGCAGTTGCACCTCTCGCGAGCCGAACTGCT
CTCTGTCACGTCATTTCCACCAAGTGGCGACACACGCAACGCGGCAAGGC
CATTTCGTGCTCGAACGCTGAGTTTGGTGCCATTCGCAAAGAACGTGTTT
GTGCTCTTCACTTGCGAAATGTTTCATCTGATCTACGAGGCGCGCATCAC
GCATTTCCTCTCTTCAAGTTGGAAGTACGTGACATCGGCTCGTTTGCCAA
TTGCTGGCGATGCTGTACTGTGTTTGTTTGTGTTTGCTTTTTGCCGAATG
AACGAATGAACGATTGTACGAATTTACGAATGAAGGCACTGGATATTCGT
GTCGGAGTATATGTACCGCGTGCTGCAGCCGACAGACTCGGCTCAGCAGA
TCAACATCGAGGACATGAAGGACGTCAGGATACAGGTCAGTCTGCCCTTG
AGCAGGACGTGTGCGCAAGTACCATTACTAACAATTTGTTTACCACCAAC
GGCGCACGTGTGCCAGAATAGCATACGTCTCTCGCGCTTGATCGCCGACG
ATCAAAGATGTGGCGGTGGAAAAATGGGGACTTGATTCGGTGGTCTTGCA
GAGCTTTACACGTGGATAGAGCCTCCGATGGCTGCTTGCTATTCCTCTGT
GTCTCGTATCTTCTTATTTACCGAGCAAGCACTACCTGTGCCAATTTGCG
AGAGGGAGAGATCGCCAACGCCAACATGTAGCTGCGCAAGAAGGCTTTTT
CTCGCCCCTATTTTCGTTCTCCTTCTACCGCCAATCCATCTCTTACGTCC
TGGTGATTCCTCAGACCTTGGCGGGAAAGATCCAGGAGTACGTGAAGGCC
GTCGCCCAATTGGCTCGCCTTCACTACGTGGAGCGCTGCCACAAGACCTT
CGTGGTGAACGCCCCGGCATGGTTCGGACTCTCGTTCCGCGTGGTGTCTC
CGTTCCTCAGCGCTAGGACGCGGCAGAAGATACGCATCTTGGGCTCCGAC
CTTACCGTTCTGCAGGACGAGATTGCTCCGCAGGTGAGCGGCGTGCAGTC
GCGGCAGTGGCAGCAGGAGCAGGCGGCTGAGACGCATGACTGCGTGCGGG
AGATTCCGGTAGTTTTGTTGTGGTGTTGGGACGGGGAGGGGATTCCAAAG
AAGGGGACGGGGAACGCGACAAGTAGTCGCGATTGATTGAAAAGTGATGT
CATGGAAGCTTACATAGGCCGGCGGTCTGGCAGGGAATGGGGTCATTTTC
GTCTTTACCCGCCAACATGTACAGCGTCGTTTAAAGCGCTCGTTTTCTGC
CAAGATCTCGGTGTAAGATCCGGTTTTGCTCAGTCGGGGAAAGGGAAATA
GGCACGCCACAGCGGTGCGACTGTGAAGGTAGTTTGTATGTTGCCTGTAA
ACCAGTGATACGCGGGTGGGTGACATCCAGCTACCCCCCTCCGCCCCGCT
GCTGTGCAGTTTCTCCCGGTAGAATACGGTGGGACGATGACCGAACCGGT
GTCCGACAGCCCGGAAGAACGCAACCTTCGCCGGCTTGTCGACGCCATTA
ACGCCAACGCCGACGCCGAGGCCACCGCCGCCGCCACGCCCAAGAACGGC
GACGGCGGCGGTGGTGCCAAGGGTGGCGGTAGACCTACCCGCCGGCCGTC
GTTTAGATCGCCCCAAAAGAAAAGCCCCAAGAAAAACGGGAAACCGTTTC
CGGTCCAGCGATCTCCGTTGGGGAAGGTGAGCAAGGTGCAAAGGGCCACG
CATCCTTCGCAGAAATAGGTAGTTGTTGCTATAAAAATGCGCTCGCGACG
AGATGCTTGCTCCTCGCGTGCTGCAATCCCCCACCCTATTCCTGTACTTA
CTTGTTAGTTGTCAGCCCATACACCCATCCCTGTGTAGAGTGCGGGATGA
AAAATCGTGGTAGAATCGAAGGTCAATGTCGATCAGTGTCCAACTCACGC
GTTCTTCCCTTCGCAACTATCAGTATTAGGCACGCGAGCTTTCCTCGCCG
CCAAAAATCCGGCAATCGCTTCCCCCTCCCGGAACCATAATTCTTGTGAC
CCCTGCTGCCAACAATAAAAACACTCGCAGACCCAACCCGTGCCTGCATC
GCAAGAGCTACACGTCTCTCCTAAGAGTGGCCGTTCTAGAGCTCGCACCA
ACGACAATGCCACTGCCGGTGGTGGCCCAAGGACCCACTCCCTCCTACCA
GAACGAGATCTGGGGCCTCGCCGGGCTACGTGGTCTGAAAGCAGCGGCCG
CGACAGCGCCGCCTCCCGTGAGCCGCTACCGGCGAACGAGGGTCTCGCCG
TCGAGATGCGGGCGGATGCTGATCCTTCCCACACCCGAAGGGTTGTCACC
GATGAAGGCGGGTCGCGGAGACGACGCGAGCTTGGCTCGGGAGGGGTCGG
TGTTGGCGTGGAGCGGGGGGTGGTGGCAGAGAGGCAGGAGCGTGAGGGAG
GTAGGGGAACCCCCCCCGTCGCGCGGTTGTTGTTTGGGGAGGATGACCAT
CAGTCGGAGGAAGACGCGCAGCCGATAGAGGACAGGCTGCAGGCTGTAAT
GAGGGACTTAGGCGTGCCCCTCGGCGAGCAGGAGAGGGTCGTGCAGGGGG
GGGGGGCGAGAGAGGGTGCCGGGGGAAACGGTCAGCCGGCGGACACAGGC
ACACTGGAGTCTGCAGCAGCGGTCGCAACTGCGGAGGAAAACAGTCTGCA
GGTGCAAGGGCAACGCGGCGGTGGCATGTCGGCTCGCGAGAATAACGGCG
ACAACTCGGCGGCAGGTCGACGTACGGTGAGACAGACAACAGACGGTTCG
CCCTACAATCAATTTTGCGGGGGGTTTACCCCCCCCCCGCCCTCCCCTCT
TGAAGAGTTTGACTATCCATTTGCATGAGGTGCTGAGCAATCCTCTATCG
TCTTTAGAACTGTTCGGGCGTTTTTTTTTTTGTTGTTGCTTCGAGCGATG
AACATGCATCGCCGCTACCCACGAAGCTGTTCCCAACTTAGAATGATTAA
TTGTTGGCGTGAACCACTCGCTTCGTGTGCCGTTGTCTCCGCAGCTTTGC
TAATGGCTTGCTTGCATCGCCGTCTCCACACGCTGCATGTTTTCTGCAGC
CATCAGCAGCGAGGACAGAGTCTTGATGGCTCAATCTTGCCCAAAATCGG
CGGCCAGCACAAAACTGCTACATTTGCCGCTCGAGTTACCGGCGCGTTGT
CCATGCACGGCGTCTTCGACGTCCTGGGACCTCCTGGAAGCACGCTGGGC
GGAAGCCCCTTGCATGGAAATTTCGGCAGAACGAGCATCACTTGCTTCGC
CGGGCTTGCACAGAACACGCGAATAACGTTTCCTCTGATTGGTCGTCTAC
CGAGAGTGTCGGTGCAATCGGAGATGGTTTCCGTTGAGGCCAATGGCGGT
GGCTGGGTAGGTTAGGTGGTTAGGTGGAGTGATTGTTTTCGTTGTCACTT
TGTGTGAGGTATGATGCATCTTCAGTCCGTGTCCGTGATATTCTTTGTCA
ACCGGTGCGTGTTTCGTGTGTCCAGTTTGTTGGGTACGGGGAGGGGAGGA
GAGGTTGGGAGTGGTTGCCGACATGGCCCCTGTGTGCGTGGTGTAGTGGT
ACCCGCGTGTGTATCGACGTCTCATGTGAAACAGTTTCAACTAGATTTCC
TTTGTCGTGATGACAACCATGATCATGATAGTTACGGCCGTGTGTGTTAA
TAAATACCTTGAAACGGGGGGTGCTTTCAAGTTTCGCTGCAGAAGCACGT
AACGAAGAAGTATTAGTTTGGTGCCCAGTAATACCAGCAGCCAGTATTTT
TTAGAAGTTTCTTTTTTGGAACACAGGAGAAAGAGCTTGGTATGTAGAGT
AGCTTTGCGTCATCGTCGTGTCATTGTACTATTGTACAGTAGATAGACGG
AGGGAAAACAATACCCAATATGCACTGCATCCCCGATACTTGCACAAGGA
AGGGTTGTAGTGTGTCTCACTGCTCGAAAAAAGTGAACATTTCATTCCAC
CCATCCGATGGCC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig827:9512..16674+

>mRNA_Ecto-sp13_S_contig827.19616.1 ID=mRNA_Ecto-sp13_S_contig827.19616.1|Name=mRNA_Ecto-sp13_S_contig827.19616.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1974bp|location=Sequence derived from alignment at Ecto-sp13_S_contig827:9512..16674+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACGCGCACAGCTGCTGCAGCTGCAGTCTGTGACCTTCCCGAGCCCCT
GGAGGCATTCACGAGCACTTCCGATGAGCCTCACGGCTGCAGCTACTGCG
CGGGTACTCCTTCCTCTCAGAACATGGTCTGCCTGCCGCCCCACGTGTTC
GCTTTCTGCATCGTGATGTCTGCCTTGGTTTCGGCTATCGTGGTGGCGAA
CCAACGCATCTACGGGGCTATCCGAGAATACCTTGGGCAATTCCTCGAGC
CATCTGCGAGCAGGGTGCACAACCCGCGCTTGCCGCACCGAAGCGCATCC
CATCACTTGGACAAGGATTCGGAAGGGGCACACGTCATCGAGGCTGCCGA
GGCTATGGACCGCGCCGCCGCCGCACCCCTAGCGCTCGAACACAAGATAC
CTGCTCGCTACGTGCGGGCGTTCTGCGGCAACGAGAAGCACGCGTCGGAG
AGGTGGAAAGCCACCCTCAAGTGGCGCAAGGAGAACGAGATAGACGCCAT
CCTCAACGAGCCTCAACAGTTCTTCCACGACATCCGACGCTACTTCCCGA
GTCACATGAGCGGAAGGAGCAGAGGGGGGCACATTGTGGTGTACGAGAAG
CTTGGAGGTGTCGACATGCGGACACTTCGGAGAAAACTAGGGGTGACCGT
GCCAATGCTCCTCAGGCACTGGATATTCGTGTCGGAGTATATGTACCGCG
TGCTGCAGCCGACAGACTCGGCTCAGCAGATCAACATCGAGGACATGAAG
GACGTCAGGATACAGACCTTGGCGGGAAAGATCCAGGAGTACGTGAAGGC
CGTCGCCCAATTGGCTCGCCTTCACTACGTGGAGCGCTGCCACAAGACCT
TCGTGGTGAACGCCCCGGCATGGTTCGGACTCTCGTTCCGCGTGGTGTCT
CCGTTCCTCAGCGCTAGGACGCGGCAGAAGATACGCATCTTGGGCTCCGA
CCTTACCGTTCTGCAGGACGAGATTGCTCCGCAGTTTCTCCCGGTAGAAT
ACGGTGGGACGATGACCGAACCGGTGTCCGACAGCCCGGAAGAACGCAAC
CTTCGCCGGCTTGTCGACGCCATTAACGCCAACGCCGACGCCGAGGCCAC
CGCCGCCGCCACGCCCAAGAACGGCGACGGCGGCGGTGGTGCCAAGGGTG
GCGGTAGACCTACCCGCCGGCCGTCGTTTAGATCGCCCCAAAAGAAAAGC
CCCAAGAAAAACGGGAAACCGTTTCCGGTCCAGCGATCTCCGTTGGGGAA
GACCCAACCCGTGCCTGCATCGCAAGAGCTACACGTCTCTCCTAAGAGTG
GCCGTTCTAGAGCTCGCACCAACGACAATGCCACTGCCGGTGGTGGCCCA
AGGACCCACTCCCTCCTACCAGAACGAGATCTGGGGCCTCGCCGGGCTAC
GTGGTCTGAAAGCAGCGGCCGCGACAGCGCCGCCTCCCGTGAGCCGCTAC
CGGCGAACGAGGGTCTCGCCGTCGAGATGCGGGCGGATGCTGATCCTTCC
CACACCCGAAGGGTTGTCACCGATGAAGGCGGGTCGCGGAGACGACGCGA
GCTTGGCTCGGGAGGGGTCGGTGTTGGCGTGGAGCGGGGGGTGGTGGCAG
AGAGGCAGGAGCGTGAGGGAGGTAGGGGAACCCCCCCCGTCGCGCGGTTG
TTGTTTGGGGAGGATGACCATCAGTCGGAGGAAGACGCGCAGCCGATAGA
GGACAGGCTGCAGGCTGTAATGAGGGACTTAGGCGTGCCCCTCGGCGAGC
AGGAGAGGGTCGTGCAGGGGGGGGGGGCGAGAGAGGGTGCCGGGGGAAAC
GGTCAGCCGGCGGACACAGGCACACTGGAGTCTGCAGCAGCGGTCGCAAC
TGCGGAGGAAAACAGTCTGCAGGTGCAAGGGCAACGCGGCGGTGGCATGT
CGGCTCGCGAGAATAACGGCGACAACTCGGCGGCAGGTCGACGTACGCCA
TCAGCAGCGAGGACAGAGTCTTGA
back to top