prot_Ecto-sp13_S_contig827.19614.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig827.19614.1
Unique Nameprot_Ecto-sp13_S_contig827.19614.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length272
Homology
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: D7G7U0_ECTSI (Ephrin_rec_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U0_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 1.210e-171
Identity = 255/271 (94.10%), Postives = 266/271 (98.15%), Query Frame = 0
Query:    1 MKPDGGLLRAFVVPTTLALAWQAWTTITARNSTLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTKPASEVNATYPYARAPLPLPFHSFCQLGCSFFFAGSPQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYACADGVMSECSPGTYRNTSYDMINTCTQCPQGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGRN 271
            MKPDGGLLRAFVVPTT ALAWQAWTT+TA NS+LFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPT+PASEVNATYPYARAPLPLPFHSFCQLGCS+FFAGSP+NT+CSGLCD+FY RNVSVGINDYAEKARLECR+GCNIAVLRCQPGY+CA GVMSECSPGTYRNTSYDMINTCTQCP+GTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXX YA+EEGTAECSCVTEDSCLPEWQNFQRDSMPHIGRN
Sbjct:    1 MKPDGGLLRAFVVPTTFALAWQAWTTLTASNSSLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTEPASEVNATYPYARAPLPLPFHSFCQLGCSYFFAGSPRNTTCSGLCDDFYVRNVSVGINDYAEKARLECRDGCNIAVLRCQPGYSCAAGVMSECSPGTYRNTSYDMINTCTQCPKGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAKEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGRN 271          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A7S3HQK9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQK9_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.100e-35
Identity = 101/214 (47.20%), Postives = 126/214 (58.88%), Query Frame = 0
Query:   73 RLVGPTKPASEVNATYPYARAPLPLPFHSFCQLGCSFFFAGSPQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYACADGVMSECSPGTYRNTSYDM-------INTCTQCPQGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECSCVTEDSC---------LPEWQNFQRDSMPHIGR 270
            RL GPTK   +    +P+A A  P     FCQLGC  F+   P+NT+C  LC+ FY   ++VG ND AE+A+LEC++GC IA+  CQ GY C +G+M  C  GTYR    D+         +CT+CP G YR+  KG   D XXXXXXXXXXXXXXXXXXXXXXXXXXX      G   C C+T  SC              ++ R+S+P IGR
Sbjct:   44 RLTGPTK--MQQTKQHPWAMAAFPTKQKGFCQLGCQLFYTEVPKNTTCKRLCNYFYRYKITVGYNDLAEEAKLECQDGCEIALQVCQAGYYCDEGIMLPCPAGTYREPVTDVSILALEKATSCTKCPYGRYRSTNKGKSADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQRLCKCITPGSCGSIIDDNVVFSNGVDYYRESIPFIGR 255          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A835ZBR7_9STRA (Ephrin_rec_like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR7_9STRA)

HSP 1 Score: 134 bits (336), Expect = 6.110e-35
Identity = 102/194 (52.58%), Postives = 122/194 (62.89%), Query Frame = 0
Query:   81 ASEVNATYPYARAPLP--LPFHSFCQLGCSFFFAGSPQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYAC--ADGVMSECSPGTYRNTSYDMINTCTQCPQGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECSCVTEDSCLPEWQNFQRDSMPHIGR 270
            A  V  T+PYA A          FC+ GC++F++ SP   SC   CD  Y +  S  ++D+AEKARL+CR+GC I    CQPGY C  A G M EC PGTYRN S   +  C  CP G YR    G+G+ DXXXXXXXXXXXXXXXXXXXXXXXXXXX Y   EG A C+ +T DS  PE+QN   +S P +GR
Sbjct:   12 AYAVVRTHPYAVADATRLATLTQFCEAGCAYFYSSSPTLQSCDVNCDEMYRQRTSFNVSDWAEKARLDCRDGCRIGFRVCQPGYKCEHAHG-MVECEPGTYRNASDADVTQCIACPAGHYREAPGGAGLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXLYTLVEGQAACANITYDSGNPEFQNLLNESEPFLGR 204          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A7S1TV74_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV74_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.400e-34
Identity = 66/150 (44.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   53 AELVADAALNGGSWSVWDTQRLVGPTKPASEVNATYPYARAPLPLPFHSFCQLGCSFFFAGSPQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYACADGVMSECSPGTYRNTSYDMINTCTQCPQGTYRAKGKG 202
            A L A A L+       D  R VGPT+P +     +P+  AP P P+  FCQ GCS FF   P  T C   CD  Y  +V+V  ND AE ARLECR+GC + +LRCQ GY C  G M +C  GTYR+  +  +  C  CP+G YR+  +G
Sbjct:   11 ALLPAAADLDHCKADCSDAARPVGPTRPPN--TRGHPWFPAPNPNPYLQFCQTGCSLFFESYPVLTDCQAECDRIYRYDVTVAYNDQAEVARLECRDGCEMGLLRCQAGYYCTAGSMLQCPIGTYRDVDFAAVEACVDCPRGRYRSDPRG 158          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A7S2CHA6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHA6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.900e-28
Identity = 58/157 (36.94%), Postives = 86/157 (54.78%), Query Frame = 0
Query:   73 RLVGPTKPAS--------------EVNATYPYARAPLPLPFHSFCQLGCSFFFAGS-----PQN-------------TSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYACADGVMSECSPGTYRNTSYDMINTCTQCPQGTYR 197
            RLVGPT+P+               ++   +P+AR+P P P+  FCQ+GC++++        PQ              ++C   C++ +  +++ G +D AE ARLEC +GC IA LRCQPGY+C +G M+ C PGTYR+  Y  +  C  CP G YR
Sbjct:  142 RLVGPTRPSDSDVYLFGLHETIHLDLTRPHPWARSPEPNPYMKFCQIGCTYYYNQEQWGIYPQREVPSDVVENWNTLSACLARCNHTFRYDITTGYSDIAEMARLECWDGCQIANLRCQPGYSCFNGDMNPCKPGTYRHNEYTRVEQCYDCPNGRYR 298          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A7S1ZTF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTF7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 6.860e-28
Identity = 94/205 (45.85%), Postives = 118/205 (57.56%), Query Frame = 0
Query:   99 FHSFCQLGCSFFFAG--SPQNTS-CSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYACAD-------------------------GVMSECSPGTYRNTSYDMINTCTQCPQGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECSCVTEDSC----LPEWQNFQ-RDSMPHIGR 270
            ++ FC++GC+ FF+    P + S C+  CD  Y  N++VG ND  E +RLECR+GC +A+ RCQPGY C+                          G MS C  G YR+ SYD I  C  CP G +R   KG  +D XXXXXXXXXXXXXXXXXXXXXXXXXXX        A C C+T DSC    LP   N + R+++P+IGR
Sbjct:   96 YYKFCEVGCTLFFSSISDPMHLSECTHKCDQIYQYNITVGYNDLMEVSRLECRDGCQMALKRCQPGYFCSQVSLLNDDENSTLGPKSHGRDTRYTGGYMSHCPAGKYRDFSYDAIEMCVDCPPGRFREDTKGKSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFCKCITSDSCKKEQLPSPANSEKRETIPYIGR 300          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A7S0XEG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEG6_9STRA)

HSP 1 Score: 116 bits (290), Expect = 7.040e-28
Identity = 90/186 (48.39%), Postives = 112/186 (60.22%), Query Frame = 0
Query:   73 RLVGPTKPASEVNATYPYARAPLPLPFHSFCQLGCSFFFAGSPQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYACADGVMSECSPGTYRNTSYDM-------INTCTQCPQGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECSCVTED 251
            RL GP KP      T+P+  A  P    +FC+LGC +FF+    N +C   C   Y    + G +D AE A+LEC +GCNIA+  CQ GY C +G M+ C  G YR +  D+       ++TC  CP G YRA  KG   +DXXXXXXXXXXXXXXXXXXXXXXXXXXX    EEG+  C C+T +
Sbjct:   44 RLFGPIKPPD--TRTHPWKVAQFPSTTTAFCKLGCQYFFSYYSNNNTCINQCKYQYRYQATTGYSDSAELAKLECLDGCNIALSICQAGYYCVNGNMTVCPAGKYRESVSDLSLITLEKVHTCINCPYGRYRALDKGRSANDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGSRYCKCITTE 227          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A7S1FSZ0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSZ0_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.060e-27
Identity = 91/197 (46.19%), Postives = 122/197 (61.93%), Query Frame = 0
Query:  103 CQLGCSFFFA---GSPQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYACAD---------------------GVMSECSPGTYRNTSYDMINTCTQCPQGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECSCVTEDSC----LPEWQNFQ-RDSMPHIGR 270
            CQLGC+ FF+      Q +SC  LCD+ YA N++V  ND  E  RLECR+GC++A++RCQPGY C                       G M EC PG+YR+ SY  ++TC  CP G +R + +G  ++ XXXXXXXXXXXXXXXXXXXXXXXXXXX +  E G   C C+T  +C    LP+  + + R+++P++GR
Sbjct:  232 CQLGCTLFFSLRENPKQLSSCLSLCDDKYAYNITVSYNDLMELVRLECRDGCHMALMRCQPGYFCLQPSTTLDDDGKHHLSSTSLPNGGSMHECLPGSYRDVSYHAVDTCVPCPPGRFREETRGLSMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFTTEPGRHVCKCITPQACDKEQLPDPADAEKRNTVPYVGR 428          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: K0QZJ0_THAOC (Ephrin_rec_like domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZJ0_THAOC)

HSP 1 Score: 96.3 bits (238), Expect = 4.940e-19
Identity = 99/250 (39.60%), Postives = 128/250 (51.20%), Query Frame = 0
Query:   32 STLFVSATLEQCHLDCAGNTTAELVADAALNGGSWSVWDTQRLVGPTKPASEVNATYPYARAPLP--LPFHSFCQLGCSFFF----AGSPQNTSCSGL------CDN-FYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYAC------------ADGVMSECSPGTYRNTSYDMINTCTQCPQGTYRAKGKGSGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXFYAEEEGTAECSCVTEDSCLPE 256
            S + V AT EQC +DC         +D       W   D      P + A  +   YPY  A       + +FC+LGC++FF    +  P++ S S L      C+  F   + +   ND    ARLECR+GC +A+ RCQPGY C            A G M+ C PGTYR+  Y  +  C  CP   +R   KG     XXXXXXXXXXXXXXXXXXXXXXXXXXX +A +  +  C+C+T D+C  E
Sbjct:  150 SAVVVLATEEQCRIDCN--------SDDRTPTRPWHEQD------PLRNALRLTRPYPYHAAADDDERDYPAFCRLGCNYFFVPESSDDPEDESKSTLDQCLERCEEEFEYTSTTPPYNDLVAIARLECRDGCLLALRRCQPGYYCSQVSFRDGNGTYAGGQMTPCPPGTYRDVDYGAVEACVPCPPNHFREDVKGRSASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASQPASY-CTCITPDACARE 384          
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Match: A0A7S2SQ56_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ56_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.320e-17
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 0
Query:   72 QRLVGPTKPASEVNATYPYA--RAPLPLPFHSFCQLGCSFFFAGS--PQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNGCNIAVLRCQPGYAC----------ADGV--------MSECSPGTYRNTSYD----------------MINTCTQCPQGTYRAKGKG 202
            +R +GPT+P+   +  Y +A  +   P  +  FC+ GC+FF++    P N +C   C + YA   SVG ND A  ARLEC +GC++A++RC+PGY+C           D          M+ C  GT+R   Y+                 +++C  CP G YR   KG
Sbjct:   86 RRPIGPTRPSEPRDHPYFHAVGKDAWPNTYAKFCEAGCTFFYSEPEYPSNITCKQRCSSTYAYEGSVGENDMAMVARLECYDGCDLALMRCRPGYSCDWPSTTGLGAVDAAAGWTRTANMTACPLGTWRGVLYNETSGSQTDEDLYSPGISVDSCRDCPSGRYRDFPKG 254          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig827.19614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G7U0_ECTSI1.210e-17194.10Ephrin_rec_like domain-containing protein n=1 Tax=... [more]
A0A7S3HQK9_9STRA1.100e-3547.20Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835ZBR7_9STRA6.110e-3552.58Ephrin_rec_like domain-containing protein n=1 Tax=... [more]
A0A7S1TV74_9STRA6.400e-3444.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2CHA6_9STRA4.900e-2836.94Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1ZTF7_9STRA6.860e-2845.85Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S0XEG6_9STRA7.040e-2848.39Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S1FSZ0_9STRA1.060e-2746.19Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
K0QZJ0_THAOC4.940e-1939.60Ephrin_rec_like domain-containing protein (Fragmen... [more]
A0A7S2SQ56_9STRA1.320e-1732.54Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 175..228
e-value: 3.2E-8
score: 43.3
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 184..228
e-value: 1.7E-8
score: 34.1
NoneNo IPR availableGENE3D2.10.50.10coord: 198..256
e-value: 1.2E-5
score: 27.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 102..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig827contigEcto-sp13_S_contig827:2906..4460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig827.19614.1mRNA_Ecto-sp13_S_contig827.19614.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig827 2906..4582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig827.19614.1 ID=prot_Ecto-sp13_S_contig827.19614.1|Name=mRNA_Ecto-sp13_S_contig827.19614.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=272bp
MKPDGGLLRAFVVPTTLALAWQAWTTITARNSTLFVSATLEQCHLDCAGN
TTAELVADAALNGGSWSVWDTQRLVGPTKPASEVNATYPYARAPLPLPFH
SFCQLGCSFFFAGSPQNTSCSGLCDNFYARNVSVGINDYAEKARLECRNG
CNIAVLRCQPGYACADGVMSECSPGTYRNTSYDMINTCTQCPQGTYRAKG
KGSGVDDCALCPVNTYQNTTGATAETDCIRCPDGFYAEEEGTAECSCVTE
DSCLPEWQNFQRDSMPHIGRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR009030Growth_fac_rcpt_cys_sf