prot_Ecto-sp13_S_contig8260.19608.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8260.19608.1
Unique Nameprot_Ecto-sp13_S_contig8260.19608.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length404
Homology
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: D8LGF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF9_ECTSI)

HSP 1 Score: 677 bits (1746), Expect = 2.670e-234
Identity = 368/405 (90.86%), Postives = 379/405 (93.58%), Query Frame = 0
Query:    1 ESKAASLDQVDCFLRTKSQKESEWAMQEVDDVSDVSPSSRRVDEGRTGSSSLDVEGGGAAESASGIEEELEARRRRSTNRSPSSGGDAF--GLRPGATSALDTDQPLAGGAAGLIEAAPDMAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKIFPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIR 403
            ESKAAS+DQ+D FLR KSQKES+WAMQEVDDVSDVSPSSRRVDEGRTGSSSLDVEGGGAAESASGIEEELEARRRRS NRSPSSGGD    G RPG TSALDTDQPLAGGAAGLIEAAPDMAKEALSSLASVGNSAF+TTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDC+ APDPRDVVWKNIA+  P         QNDLRQNVAAWLVAAGAIFWS PVLLIQ WASYS+LEKIFP+LADLDPDSFLYYVIAGYLPVVLL XXXXLLPFLFQ ALAYRYERRKSHSEVQQ+ILTRYFTYQVANIYVTVASGSIISALQEILDDP +VLNILGETFPAVAVYFLDVIVVK+FVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIR
Sbjct:  378 ESKAASVDQIDFFLRAKSQKESQWAMQEVDDVSDVSPSSRRVDEGRTGSSSLDVEGGGAAESASGIEEELEARRRRSKNRSPSSGGDELKPGPRPGVTSALDTDQPLAGGAAGLIEAAPDMAKEALSSLASVGNSAFNTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQP---------QNDLRQNVAAWLVAAGAIFWSFPVLLIQLWASYSELEKIFPVLADLDPDSFLYYVIAGYLPVVLLLXXXXLLPFLFQ-ALAYRYERRKSHSEVQQSILTRYFTYQVANIYVTVASGSIISALQEILDDPASVLNILGETFPAVAVYFLDVIVVKIFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIR 772          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A6H5JF22_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF22_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 1.260e-109
Identity = 186/206 (90.29%), Postives = 194/206 (94.17%), Query Frame = 0
Query:    1 ESKAASLDQVDCFLRTKSQKESEWAMQEVDDVSDVSPSSRRVDEGRTGSSSLDVEGGGAAESASGIEEELEARRRRSTNRSPSSGGDAF--GLRPGATSALDTDQPLAGGAAGLIEAAPDMAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPP 204
            ESKAAS+DQ+D FLRTKSQKES+WAMQEVDDVSDVSPSSRRVDEGRTGSSSLDVEGGG AES SGIEEELEARRRRS N+SPSSGGD    G RPGATSALDTDQPLAGGAAGLIEAAP+MAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACA+SRQVLLAPRPDWCDC+ APDPRDVVWKNIA+  P
Sbjct:  377 ESKAASVDQIDFFLRTKSQKESQWAMQEVDDVSDVSPSSRRVDEGRTGSSSLDVEGGGGAESLSGIEEELEARRRRSMNQSPSSGGDELKPGPRPGATSALDTDQPLAGGAAGLIEAAPEMAKEALSSLASVGNSAFHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACASSRQVLLAPRPDWCDCEPAPDPRDVVWKNIAVPQP 582          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A835ZAA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.780e-57
Identity = 120/262 (45.80%), Postives = 164/262 (62.60%), Query Frame = 0
Query:  143 RGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKIFPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTV-------------ASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRC 391
            R +  L + +R+S+TGFVTF  +AA AA+ Q+L+  RP  C    AP+PRDVVWKN A+            Q  LR  +A  L+A GAI WS+P+  +Q W S  QL K  P L  L+ D +LY +++GYLPV++L     LLP +F   +A  YE RK+ S+VQ ++++R+F YQ+ANIY+TV             ASG+I+ A Q I+D+P  V  ILG T P+VAVYF+++++VK   GLP EL R WPLI V WSQRC
Sbjct:  577 RSIAGLAIPERVSSTGFVTFNTLAAKAAASQLLVTHRPRTCRTYPAPEPRDVVWKNAAVPA---------GQVALRGIIANVLLAFGAILWSVPITALQAWTSMDQLSKWIPALDSLNHDGYLYTLVSGYLPVLVLLILIMLLPVIFTM-IAQGYELRKTISDVQASVMSRFFYYQLANIYITVSAAXXXXXXLSLVASGTILEAFQSIVDNPKEVATILGTTLPSVAVYFVNLVLVKTLSGLPMELSRLWPLITVTWSQRC 828          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A7S4V0U0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V0U0_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.150e-40
Identity = 102/270 (37.78%), Postives = 150/270 (55.56%), Query Frame = 0
Query:  135 FHTTRRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKI--FPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREI 402
            F T  R    V+   +G  MST GFVTF  +++   S    L  +P+  +   AP+ RD++WKN  +    +           R  +A  L++ GAI WSIP+ +IQ  A+   L +I     +   D  + L  +I GYLPVV L     +LP +FQ   A  YE RK+ S+VQ +I+ RYF YQ+ANIY+TV +GSI ++L +ILD P+A+L ILG   P V  YF+ +++ K+  GLP  +LR   L R+L+ + C      T+RE+
Sbjct:  194 FKTLNRQLDDVVESAVGATMSTVGFVTFIDLSSVTCSCGAFLTHKPNVLEVQVAPETRDIIWKNAHIDKGVI---------QGRAFLANVLLSLGAILWSIPLAMIQALATADSLARIPGMEWILSFDEGT-LRGLINGYLPVVALLSLIVILPIIFQWV-AVHYEGRKTLSDVQASIMGRYFYYQLANIYITVTAGSIYNSLADILDRPSAILEILGTKLPTVVGYFISLLITKILAGLPVIILRFGALSRMLFLKACFRERKMTQREL 452          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A7S2NWW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWW9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.510e-40
Identity = 93/255 (36.47%), Postives = 142/255 (55.69%), Query Frame = 0
Query:  150 LGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKIFPILADLDPDSFLYYV--IAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREI 402
            +G+ M++TGFV+F  + +   +    L  +P+      +P+PRD++WKNI             +    R++ A + +A GAI WSIP+  IQ  A+   L ++ P ++ L   S L     I GYLPVV L     +LP +F+   A  YE RK++S+VQ +IL RYF YQ+ANI++TV +GSI  +L ++L  P +   ILG + P V  YF+  +  K   GLP  LLR  PL ++L+ + C      T+RE+
Sbjct:   65 IGRTMASTGFVSFTDLPSVCYAASAPLCHQPEMLQTSLSPEPRDIIWKNIQGN---------INLVKQREDAANFFLALGAILWSIPLTAIQALATAESLSRV-PFMSWLSTSSNLRLTAFINGYLPVVALLTLIMILPIIFEWV-AVNYENRKTYSDVQNSILNRYFYYQLANIFITVTAGSIWDSLNDLLYSPYSAFVILGRSLPTVVGYFVSFLATKTLAGLPMVLLRLGPLGKMLFYRLCLRESKLTQREL 308          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A813JQU3_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JQU3_POLGL)

HSP 1 Score: 158 bits (399), Expect = 1.920e-40
Identity = 96/242 (39.67%), Postives = 137/242 (56.61%), Query Frame = 0
Query:  139 RRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKIFPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGW 380
            R  A+ +   T+G+  S+T FVT R +     ++QV+L    +W     A +PRD++W N+              Q ++R ++A      G +FWS+PV LIQ WAS   L+K FP +  L     LY  +  YLP V L     LLP +F+  +A R+E  K+ SEVQ+ +L R F+YQ+A++YVTV SGS+  +LQ ILD P  VL IL ++ P VAVYFL  ++ +   GLP  LLR W
Sbjct:   82 RNAAQALQDATVGRTASSTAFVTLRSIGRSTEAQQVVLGHEGNW-RVRGAAEPRDLLWCNVWKP---------LQQVEMRHSLALVACTFGLLFWSVPVTLIQAWASIGMLKKWFPAVERLQAIPNLYSFLTNYLPAVALIGLQALLPSVFE-GMASRWEGHKTKSEVQRVVLNRCFSYQLASLYVTVLSGSLWDSLQSILDHPGNVLGILSQSLPKVAVYFLTFVLARACSGLPILLLRPW 312          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: B8C4F1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4F1_THAPS)

HSP 1 Score: 161 bits (407), Expect = 9.460e-40
Identity = 98/255 (38.43%), Postives = 147/255 (57.65%), Query Frame = 0
Query:  150 LGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKI--FPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREI 402
            +G  MS+TGF+TFR +     + +  L  +PD      AP+PRD++W+N  +             +  R+  A  L+  GAI WSIPV +IQ  A+  Q+  +     ++ L+  +   +V  GYLPVVLL     +LPFLF   +A  YE RK+ S+VQ++I+ RYF YQ+ANIY+TV +GSI+ +L EI + P+ V  ILG++ P V  YF   I+ K+F GLP  LLR  PL R+++ +      + T+ E+
Sbjct:  377 VGATMSSTGFITFRDLQTVTCAVKTPLFDKPDVLVVSMAPEPRDIIWENCHVN---------LGWSKGREWTANMLLGLGAILWSIPVAIIQALATADQIATVPGMAWISTLNGGAVAGFV-NGYLPVVLLLTIIMVLPFLFY-VVALHYEDRKTQSDVQKSIIGRYFYYQLANIYITVTAGSILESLGEIAEHPSNVFAILGKSLPNVVGYFATFIMTKVFAGLPLILLRVGPLFRMIFIKLLFREKYLTQSEM 620          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A7S3MIQ7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MIQ7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.970e-39
Identity = 104/292 (35.62%), Postives = 161/292 (55.14%), Query Frame = 0
Query:  125 SSLASVGNSAFHTTRRVARGVL-----------YLTLGQ--RMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKIFPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREIR 403
            S L  +G     T    A+G L            LT G   R+STT FVTF+   A A+  Q+LL+      +  +AP+P  +VW+N+++           SQ ++R+++A   +  GA+FWSI V  I   ++   + ++ P L     ++ LY +   YL ++LLXXXX LLPF+F     Y YE  K+  ++Q +I+TRYF YQ+ANIYV+V  GS+ S+L E+L +P  +L ILG   P  + YF  +++VK    +P E+LR +PL+ +L    C ++   T RE+R
Sbjct:  503 SGLEGIGKEGVKTAEFAAKGALRGVLEATRALELLTFGAQYRVSTTAFVTFKTRKAAASCHQMLLSHEYYTMEVKSAPNPSSLVWENVSIP---------LSQINIRRSIADGTLIVGALFWSIVVTAISAVSNMQSISRVIPSLQQYS-ETQLYQIANNYLALLLLXXXXALLPFVFDFIARY-YEGLKTEIDIQNSIMTRYFYYQLANIYVSVGLGSVASSLHEVLANPANLLTILGAAVPTFSTYFACLVIVKTMTAVPIEMLRIFPLLDILSVSLCMDKRRCTRRELR 783          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A7S4VLS2_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLS2_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.530e-39
Identity = 97/255 (38.04%), Postives = 144/255 (56.47%), Query Frame = 0
Query:  150 LGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKI--FPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATEREI 402
            +G  MS+TGFVTF  +       +  L+  P   + + APDPRD+ W+N  +           S +  R+  A   +  GAI WS+PV  IQ WA+   L  I  F  +   D   F  +V  GYLPVV L     +LP +F+  +A  YE RK++S+V+++ILTRYF YQ+ANIY+TV +GSI ++L +ILD P  V  ILG++ P V  YF+ +++ K+  GLP  +LR   L R+L+ +      + T+ E+
Sbjct:  683 VGTTMSSTGFVTFTDLQTVTCGAKAPLSDDPRVLEANIAPDPRDIKWENAHINR---------SWSAGREWTANVALGVGAILWSVPVAAIQAWATADSLASIPGFEWIMSFDGGEFASFV-NGYLPVVALLCIILILPIIFEW-IAVHYENRKTYSDVEKSILTRYFYYQLANIYITVTAGSIWTSLSDILDHPGNVFAILGKSLPTVVGYFVALLLTKILAGLPLVMLRFGALGRILFLKIFFKTKYLTQSEL 926          
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Match: A0A813JG33_POLGL (Hypothetical protein n=4 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JG33_POLGL)

HSP 1 Score: 158 bits (399), Expect = 6.600e-39
Identity = 96/242 (39.67%), Postives = 137/242 (56.61%), Query Frame = 0
Query:  139 RRVARGVLYLTLGQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIALTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLEKIFPILADLDPDSFLYYVIAGYLPVVLLXXXXXLLPFLFQQALAYRYERRKSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILGETFPAVAVYFLDVIVVKLFVGLPFELLRGW 380
            R  A+ +   T+G+  S+T FVT R +     ++QV+L    +W     A +PRD++W N+              Q ++R ++A      G +FWS+PV LIQ WAS   L+K FP +  L     LY  +  YLP V L     LLP +F+  +A R+E  K+ SEVQ+ +L R F+YQ+A++YVTV SGS+  +LQ ILD P  VL IL ++ P VAVYFL  ++ +   GLP  LLR W
Sbjct:  299 RNAAQALQDATVGRTASSTAFVTLRSIGRSTEAQQVVLGHEGNW-RVRGAAEPRDLLWCNVWKP---------LQQVEMRHSLALVACTFGLLFWSVPVTLIQAWASIGMLKKWFPAVERLQAIPNLYSFLTNYLPAVALIGLQALLPSVFE-GMASRWEGHKTKSEVQRVVLNRCFSYQLASLYVTVLSGSLWDSLQSILDHPGNVLGILSQSLPKVAVYFLTFVLARACSGLPILLLRPW 529          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8260.19608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGF9_ECTSI2.670e-23490.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF22_9PHAE1.260e-10990.29ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835ZAA7_9STRA1.780e-5745.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4V0U0_9STRA1.150e-4037.78Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S2NWW9_9STRA1.510e-4036.47Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A813JQU3_POLGL1.920e-4039.67Hypothetical protein (Fragment) n=2 Tax=Polarella ... [more]
B8C4F1_THAPS9.460e-4038.43Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3MIQ7_9STRA1.970e-3935.62Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4VLS2_9STRA3.530e-3938.04Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A813JG33_POLGL6.600e-3939.67Hypothetical protein n=4 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003864Calcium-dependent channel, 7TM region, putative phosphatePFAMPF02714RSN1_7TMcoord: 223..398
e-value: 4.7E-30
score: 104.8
NoneNo IPR availablePANTHERPTHR13018PROBABLE MEMBRANE PROTEIN DUF221-RELATEDcoord: 129..398
NoneNo IPR availablePANTHERPTHR13018:SF5CALCIUM PERMEABLE STRESS-GATED CATION CHANNEL 1coord: 129..398
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..244
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..374
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..289
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 375..403
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 245..263
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 310..332
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 333..351
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 290..309
NoneNo IPR availableTMHMMTMhelixcoord: 310..332
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 352..374
NoneNo IPR availableTMHMMTMhelixcoord: 267..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8260contigEcto-sp13_S_contig8260:3..6814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8260.19608.1mRNA_Ecto-sp13_S_contig8260.19608.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8260 3..6814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8260.19608.1 ID=prot_Ecto-sp13_S_contig8260.19608.1|Name=mRNA_Ecto-sp13_S_contig8260.19608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
ESKAASLDQVDCFLRTKSQKESEWAMQEVDDVSDVSPSSRRVDEGRTGSS
SLDVEGGGAAESASGIEEELEARRRRSTNRSPSSGGDAFGLRPGATSALD
TDQPLAGGAAGLIEAAPDMAKEALSSLASVGNSAFHTTRRVARGVLYLTL
GQRMSTTGFVTFRQMAACAASRQVLLAPRPDWCDCDTAPDPRDVVWKNIA
LTPPSLPTCFLFSQNDLRQNVAAWLVAAGAIFWSIPVLLIQFWASYSQLE
KIFPILADLDPDSFLYYVIAGYLPVVLLLLLMMLLPFLFQQALAYRYERR
KSHSEVQQTILTRYFTYQVANIYVTVASGSIISALQEILDDPTAVLNILG
ETFPAVAVYFLDVIVVKLFVGLPFELLRGWPLIRVLWSQRCTNRDFATER
EIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003864RSN1_7TM