prot_Ecto-sp13_S_contig8257.19605.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8257.19605.1
Unique Nameprot_Ecto-sp13_S_contig8257.19605.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length287
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8257.19605.1 vs. uniprot
Match: A0A6H5KJ22_9PHAE (BED-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ22_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 1.280e-87
Identity = 208/230 (90.43%), Postives = 209/230 (90.87%), Query Frame = 0 
Query:    1 TFARVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNXXXXXXXXXXXXXXXXXKAETAAPGQQPAIPGQAMPPQFNGHQPMPGMMFPGGAPGPGMGFHPMGQPGFHXGMMGPXXXXXXXXXXXGPPPMHGGPNMPPHMFGGPRGPNGQMLGGPMQGGFPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGPRGAVPPLFPAGAAAXXXXX-TAQQ 229
            T + VPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTN XXXXXXXXXXXX    K ETA PGQQPA  GQ MPPQFNGHQPMPGMMFPGGAPGPGMGFHPMGQPGFH GMMGPXXXXXXXXXXX PPPMHGGPNMPPHM GGPRGPNGQMLGGPMQGGFPRXXXXXXXXXXXXXXXXXXXXX   XXXXXXX  XXVGPRGAVPPLFPAGAAAXXXXX TAQQ
Sbjct:   66 TISEVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNGXXXXXXXXXXXXPETPKVETATPGQQPAXXGQGMPPQFNGHQPMPGMMFPGGAPGPGMGFHPMGQPGFHPGMMGPXXXXXXXXXXXXPPPMHGGPNMPPHMLGGPRGPNGQMLGGPMQGGFPRXXXXXXXXXXXXXXXXXXXXXKGAXXXXXXXGVXXVGPRGAVPPLFPAGAAAXXXXXXTAQQ 295
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BLAST of mRNA_Ecto-sp13_S_contig8257.19605.1 vs. uniprot
Match: A0A4D9DIG1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DIG1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.350e-5
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:    1 TFARVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAG 42
            T  ++P AKEGR SVD+E++G+ GIP E   ERAAKK R  G
Sbjct:   66 TLKKIPGAKEGRDSVDVEVFGMQGIPMECLMERAAKKQRTGG 107
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BLAST of mRNA_Ecto-sp13_S_contig8257.19605.1 vs. uniprot
Match: W7U1I4_9STRA (Zinc finger protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1I4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.450e-5
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:    1 TFARVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAG 42
            T  ++P AKEGR SVD+E++G+ GIP E   ERAAKK R  G
Sbjct:   90 TLKKIPGAKEGRDSVDVEVFGMQGIPMECLMERAAKKQRTGG 131
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8257.19605.1 vs. uniprot
Match: A0A835ZE93_9STRA (BED-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE93_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.870e-5
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:    1 TFARVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKA-RIAGT 43
            T  +V NAKEGR+S + EI+G+ GIPAEA AERAA+KA   AGT
Sbjct:   66 TVTQVQNAKEGRESAEYEIFGMEGIPAEAIAERAARKAAEAAGT 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8257.19605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KJ22_9PHAE1.280e-8790.43BED-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A4D9DIG1_9STRA2.350e-557.14Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U1I4_9STRA2.450e-557.14Zinc finger protein n=2 Tax=Nannochloropsis gadita... [more]
A0A835ZE93_9STRA4.870e-563.64BED-type domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23215:SF0BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207coord: 2..286
NoneNo IPR availablePANTHERPTHR23215ZINC FINGER PROTEIN 207coord: 2..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8257contigEcto-sp13_S_contig8257:229..1633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8257.19605.1mRNA_Ecto-sp13_S_contig8257.19605.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8257 229..3153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8257.19605.1 ID=prot_Ecto-sp13_S_contig8257.19605.1|Name=mRNA_Ecto-sp13_S_contig8257.19605.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
TFARVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNGGDGAP
AAAAAAAPETPKAETAAPGQQPAIPGQAMPPQFNGHQPMPGMMFPGGAPG
PGMGFHPMGQPGFHPGMMGPPRPGFNPMQHGGPPPMHGGPNMPPHMFGGP
RGPNGQMLGGPMQGGFPRGPPPAPPGPPPRGLPPGLQPGKGAPPNGAPPG
APPVGPRGAVPPLFPAGAAAAAAAATAQQPVAVGSTLTRAPTHGAPGGPP
NTSSGLPGQAQSMPVVVGDEEFSMEEKRAELAAYKV*
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