mRNA_Ecto-sp13_S_contig8253.19603.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 1057 bits (2734), Expect = 0.000e+0 Identity = 532/651 (81.72%), Postives = 552/651 (84.79%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEI--------------------------------------------------------------ESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVEKTP 1767
KGAP QNKNAL GGNY +LYSILLERD+GE EFDKWVSGDTEPPALTL HLEKW+ +TKA VVVWSHRGTGANILGPS GKT+LRPPT+HVGVREGHVYRLVLEG RDRFGSSLDVA+EHRVRTYRKFRRISEM EEEEEPD TG G KTFSCVADIVSDIMAI QTGG HNRQ V KKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYS WDSLSLPA GIIIRTWCSASMG LDPD FE DQATRL+ELH+ALGLKFYRGVLDFRVSSQYSQSLLALL VCWRGPIVGAEDASGS YGREDWQCDINGAHTAAL+NMETVPVFGHMDEVEEFDGHN+EDWTLYIIKLDALGEPDVFL AD+TPVFGRNYKRYLDLIDNAPRHR+THFVRPSRTVS+CHI KLV DLLAHELGDPLLEDADCARRFK+GIFVRASGMLQQR+ADRIDAVMVTS++EASAVGGKIVPVLCEVDRVKAELRTGQGDL I ES+RT DAYLCFEAERTW RDGFWALG LILDETRLRVLEARNALES GA DFSYQCDAVFF+GSSSVQ KMRLRFDHLFSG EKTP
Sbjct: 253 KGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRFGSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSKCHISKLVRDLLAHELGDPLLEDADCARRFKKGIFVRASGMLQQRYADRIDAVMVTSTDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAXDEASAVGGKIVPVLCEVDRVKAELRTGQGALGIESLRTGDAYLCFEAERTWYRDGFWALGTLILDETRLRVLEARNALESFGASDFSYQCDAVFFRGSSSVQDKMRLRFDHLFSGDEKTP 903
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 981 bits (2537), Expect = 0.000e+0 Identity = 477/589 (80.98%), Postives = 521/589 (88.46%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVEKTP 1767
+G+PVQNKNAL GGNY +LYSILLERD+GE EFD WVSGDT+PP LTL HL KW+ TKA+VVVWSHRGTGA++ GP + KTNLRPPT+HVGVREGHVYRLVL GP R+RFGS +DV IE+ +RT+R+FRRI+E EEEEEPD TG G KTFSCVADIVSDI+A NQT K SE KTWYAPPGTALD+LMLHLHL GVSC G+L+NYS WDSLSLPAHGI IRTWCSASMGGLDPD FE DQATRL+ELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAED SGSSYGREDWQCDINGAHTAAL+NMETVPVFGHMDEVEEFDGH++EDWTLYII+LDAL EPDVFL AD+TPVFGRNYKRYLDLID APRHR+THFVRPSRTV RCHIP LV DLL HELGDPLLEDADCAR+FK+GIFVRASGMLQQR+A+RIDAVMVTS +EASAVGGK+VPVLCEVDR KAELRTGQG+L IE++RT DAYLCF+AERTW RDGFWALGALILDETRLRVLEARNALESCGA DFSYQCDAVFF+G SV+++MRL F HLFSG +KTP
Sbjct: 67 QGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPCDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDKLMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKKTP 655
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: D7FWV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV6_ECTSI) HSP 1 Score: 974 bits (2517), Expect = 0.000e+0 Identity = 474/589 (80.48%), Postives = 517/589 (87.78%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVEKTP 1767
+G+PVQNKNAL GGNY +LYSILLERD+GE EFD WVSGDT+PP LTL HL KW+ KA+VVVWSHRGTGA++ GPS+ KTNLRPPT+HVGVREGHVYRLVL GP R+RFGS +DV IE+ +RT+R+FRRI+E EEEEEPD TG G KTFSCVADIVSDI+A NQT K SE TWYAPPGTALDELMLHLHL GVSC G+L+NYS WDSLSLPAHGI IRTWCSASMGGLDPD FE DQATRL+ELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAED SGSSYGREDWQCDINGAHTAAL+NMETVPVFGHMDEVEEFDGH++EDWTLYII+LDAL EPDVFL AD+TPVFGRNYKRYLDLID APRHR+THFVRPSRTV RCHIP LV DLL HEL D LLEDADCAR+FK+GIFVRASGMLQQR+A+RIDAVMVTS +EASAVGGK+VPVLCEVDR KAELRTGQG+ IE++RT DAYLCF+AERTW RDGFWALGALILDETRLRVLEARNALESCGA DFSYQCDAVFF+G SV+++MRL F HLFSG +KTP
Sbjct: 67 QGSPVQNKNALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTNKANVVVWSHRGTGADVAGPSDEKTNLRPPTLHVGVREGHVYRLVLVGPWRERFGSPIDVTIENGIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXXXXKASEPTTWYAPPGTALDELMLHLHLVGVSCSGRLSNYSHWDSLSLPAHGITIRTWCSASMGGLDPDEFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELADSLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGEFGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKKTP 655
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE) HSP 1 Score: 932 bits (2408), Expect = 0.000e+0 Identity = 478/610 (78.36%), Postives = 502/610 (82.30%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCK-GKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDIN----------------------------------------GAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSS 1707
KGAPVQNKNAL GGNY +LYSILLERD+GEV+FDKWVSGD EPPA T Y+TKASVVVWSHRGTGANILGP +GKTNLRPPTVHVGVREGHVYRLVLEGP RDRFGSSLDVAIEHRVRTYRKFRRISEM EE+EEPD TG+GAKTFSCVADI VSECKTWYAPPGTALDELMLHLHL GVSCK GKLTNYS WDSLSLPAHG+IIRTWCSASMGGLDPD FE DQATRL+ELHNALGLKF+RGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDI AAL+NMETVPVFGHMDEVEEFDGHN+EDWTLYI+KLDALGEPDVF AD+TPVFGRNYKRYLDLIDNAPR+R+THFVRPSRTVSRCHIPKLV DLLAHELGDPLLEDADCARRFK GIFVRASG+LQQR+ADRIDAVMVTSS+EASAVGGKIVPVLCEVDRVKAELRTGQGDL I+S+RT +AYLCF+AERTW RDGFWALG L LDETRLRVLEARNAL GA DFSYQCDAVFF+GSSS
Sbjct: 232 KGAPVQNKNALDGGNYFRNLYSILLERDIGEVKFDKWVSGDAEPPASTPSRKVALDYMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIEHRVRTYRKFRRISEMTEEKEEPDPTGFGAKTFSCVADI----------------------------VSECKTWYAPPGTALDELMLHLHLGGVSCKKGKLTNYSRWDSLSLPAHGLIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDIXTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIVKLDALGEPDVFHNADVTPVFGRNYKRYLDLIDNAPRYRVTHFVRPSRTVSRCHIPKLVKDLLAHELGDPLLEDADCARRFKNGIFVRASGLLQQRYADRIDAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALGTLTLDETRLRVLEARNAL---GASDFSYQCDAVFFRGSSS 810
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 924 bits (2389), Expect = 0.000e+0 Identity = 456/592 (77.03%), Postives = 512/592 (86.49%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAK-TFSCVADIVSDIMAINQTGGDHNRQPVG-KKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVE-KTP 1767
+GA +NAL GGNY +L+S+LL+RDVG EFD W+SG +EPPALTL LEKW+ T+A+VVVWSHRG+G ++LGP + KT+LRP +HVGVREGHVYRL L+GP RDRFGSSLDVAIEH V+T R+FRRI+E EE+++PDTT G+K TF CVADIVSD+MAINQ+ ++ Q KKRK G++ SE TWYAPPGT LDELMLHLHL GVSC+G+LT+YS WDSLSLPAHGI IRTWCSASMGGLDPD E DQATRL+ELHN LGLKFY GVLDFRVSSQYSQSLLALLEVCWRGPIVGAE+ SG+SYG EDWQCDINGAHTAAL++ME VPVFGH+DEVEE+D H +EDWTLYII+LDA G+PDVF AD+TPVFGRNYKRYLDL+D A RHR+THFVRPSR VS CHIPKLV DLLAHE GDP L+DADCAR+FK+GIFVRASGMLQQR+ADRIDAVMVT +EASAVGGKIVPVL EVDRVKAELRTGQG L IES+RT DAYLC +AERTW RDGFWALGALILDETRLRVLEARNALESCGA DFSYQCDAVFF+GSSSVQ+KMRLRF LF G E KTP
Sbjct: 257 EGATTPLRNALDGGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRFGSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEFNTWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGDETKTP 848
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: A0A6H5J754_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J754_9PHAE) HSP 1 Score: 909 bits (2348), Expect = 0.000e+0 Identity = 461/588 (78.40%), Postives = 487/588 (82.82%), Query Frame = 1
Query: 4 GAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVEKTP 1767
GAPVQNKNAL GGNY +LYSILLERD+GEVEFDKWVSGDTEPPALTLLHLEKW+++TKASVVVWSHRGTGANILGP +GKTNLRPPTVHVGVREGHVYRLVLEGP RDRFGSSLDVAIEHR EPD TG+GAKTFSCVADIVSDIMAI QTGGDH+RQPV KKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYS WDSLSLPAHG+IIRTW SASMGGLDPD FE DQATRL+ELHNALGLKF RGVLDFRVSSQYS+SLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAAL+NMETVPVFGHMDEVEEFDGHN+EDWTLYIIKLDAL +TH+V PSRTVSRCHIPKL+ DLL HELGDPLLEDAD ARR K+ +RA +EASAVGGKIVPVLCEVDRVKAELRTGQGDL I+S+RT +AYLCF+AERTW RDGFWAL L LDETRLRVLEARNALESCGA DFSYQCDAVFF+GSSSVQ+KM LRFDHLF+G EKTP
Sbjct: 215 GAPVQNKNALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIEHR------------------EPDPTGFGAKTFSCVADIVSDIMAIKQTGGDHSRQPVEKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGLIIRTWFSASMGGLDPDDFEPDQATRLIELHNALGLKFCRGVLDFRVSSQYSKSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDAL---------------------------------VTHYVGPSRTVSRCHIPKLMKDLLTHELGDPLLEDADYARRVKKRN-IRAG-----------------QCDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALRTLTLDETRLRVLEARNALESCGASDFSYQCDAVFFRGSSSVQEKMVLRFDHLFTGDEKTP 733
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 886 bits (2290), Expect = 0.000e+0 Identity = 446/589 (75.72%), Postives = 472/589 (80.14%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVEKTP 1767
KGAPV NKNAL GGNY +LYSILLERD+GEVEFD WVSGD EPPALTLLHLEKW+++T ASVVVWSHRGTGANILGPS+GKTNL+PPT+HVGVREGHVYRLVLEGP DRFGSSLDVAI+H VRTYRKFRRISEM EE+EPDTTG+G KTFSCVADIVSDIMAINQTGGDHNRQPV +KRKHGRKV+E KTWYAPPGTALDELMLHLHLAGVSCKGKLTNYS WDSLSLPAHG++IRTWCSASMGGLDPD FE DQATRL+ELHNALGLKF+RGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAAL+NMETVPVFGHMDEVEEFDGHN+EDWTLY IKLDALGEPDVFL AD+ PVFGRNYKRYLDLIDNAPRHR+THFVRPSRTVSRCHIPKLV DLLAHEL ERTW RDGFWALGALILDETRLRVLEARNALE CGA DFS+QCDAVFF+GSSSVQ+ MRLRF+ LFSG +KTP
Sbjct: 234 KGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTKTFSCVADIVSDIMAINQTGGDHNRQPV-EKRKHGRKVAESKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYTIKLDALGEPDVFLDADVMPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHEL-----------------------------------------------------------------------------------------ERTWYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGSSSVQENMRLRFNQLFSGNDKTP 732
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE) HSP 1 Score: 880 bits (2273), Expect = 6.660e-305 Identity = 459/630 (72.86%), Postives = 487/630 (77.30%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFA---------DRIDAVMVTSSEEAS-----------------------------------------------AVGG---------KIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFK 1695
+GAPVQNKNAL GGNY +LYSILLERD+GEVEFDKWVSGDTEPPALTLLHLEKW+Y+TKASVVV SHRG GAN LGPS+GKTNLRPPTVHVGVREGHVYRLVLEGP RDRFGSSLDVAIEHRVRTYRKFRRISEM EEEEEPDTTG+GAKTFSCVADIVSDIMAI QT DHNRQPV K+RKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSC +LTNYS WDSLSLPAHGII R+WCSASMGGLDPD FE DQATRL+ELH KF RGVLDFRVSSQYS+SL ALLEVCWRGP+VGAEDASGSSYGREDWQCDINGAHTAAL+NMETVPV GHMDE PDVFL AD+TPVFGRNYKRYLDLIDNAPRHR+THFVRPSRTVSRCHIPKLV DLLAHELGD LLED DCARRFK+ IFVRAS + + DR+ A + T + + GG +IV VLCEVDRVKAELRTGQGDL IES+RT DAY+CF+AERTW RDGFWALG LILDETRLRVLEARNALESCG D SYQCDAVFF+
Sbjct: 320 RGAPVQNKNALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLYMTKASVVVGSHRGPGANTLGPSDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIEHRVRTYRKFRRISEMTEEEEEPDTTGFGAKTFSCVADIVSDIMAIKQTREDHNRQPVEKERKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCISRLTNYSHWDSLSLPAHGIITRSWCSASMGGLDPDDFEPDQATRLIELH-----KFCRGVLDFRVSSQYSKSLFALLEVCWRGPMVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVLGHMDE------------------------PDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVQDLLAHELGDHLLEDDDCARRFKKEIFVRASVTRLRLWVEIVLVLCEVDRVKAELRTGQGDLGIESLRTDDAYICFDAERTWYRDGFWALGILILDETRLRVLEARNALESCGGAVTRLRLWVEIVLVLCEVDRVKAELRTGQGDLGIESLRTDDAYICFDAERTWYRDGFWALGILILDETRLRVLEARNALESCGGSDLSYQCDAVFFR 920
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: A0A6H5K992_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K992_9PHAE) HSP 1 Score: 786 bits (2029), Expect = 3.740e-270 Identity = 388/588 (65.99%), Postives = 463/588 (78.74%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRFGSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGRKVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTGQGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVEKT 1764
+GA +NAL GGNY +LYS+LL RDVG EFD W++G W+ +TKA+VVVWSHRG+G N+LGP + KTNLRPP +HVGVREGHVYRL ++GP RDRFGSSLDVAIEH VRT R+FRRI+E EEEE+PDTTG G++ F VADI +IM++++ DH+ Q +KRK G S TW +PPGTAL+ELMLHLH+ G+SC+GKLTNYS WDSL+LP+H I IRTWC+ASMGGLDP+ F +ATRL+EL NALG +FYR V+DF VSSQYSQSLL+LLE+CWRGPIVGAE ASG+SYG EDWQCDINGAHTAAL++M+TV VF MDEV+E+D H +ED TLY+++LD G+PDV+L AD+TP+ GRNY R + I RHR+THFVRP+RTV +CHIP + +LL ELGDPLLE A+ AR+FK+GIFVR SGMLQQR+ADRIDAVMVT S+EA AVGGK+V VL EV VKA LRTG +L E + T DAYLCFEA+RTW RDGFWALG ILD TRLRVLE RNALESCGA DFSYQ DAVFFK S +VQ +MRLRF HLFS + K+
Sbjct: 179 EGATEPLRNALDGGNYFRNLYSVLLGRDVGSEEFDTWLAG--------------WLSMTKANVVVWSHRGSGDNVLGPVDEKTNLRPPALHVGVREGHVYRLEVDGPWRDRFGSSLDVAIEHSVRTQRRFRRIAEAVEEEEKPDTTGCGSRAFLRVADIEKEIMSMSRLDKDHDPQSA-QKRKRGTNASASTTWCSPPGTALEELMLHLHIRGISCRGKLTNYSHWDSLTLPSHDITIRTWCAASMGGLDPNDFRPGEATRLIELQNALGQQFYRRVMDFGVSSQYSQSLLSLLEICWRGPIVGAEQASGNSYGPEDWQCDINGAHTAALLSMDTVSVFALMDEVQEYDDHEIEDSTLYVVRLDDTGDPDVYLNADVTPITGRNYNRCIQQIHRCVRHRVTHFVRPARTVEKCHIPYVARELLTRELGDPLLEGAESARKFKKGIFVRTSGMLQQRYADRIDAVMVTGSDEALAVGGKVVRVLGEVQHVKAGLRTGDKELGFEPLATGDAYLCFEAKRTWFRDGFWALGEEILDRTRLRVLEVRNALESCGASDFSYQFDAVFFKASPAVQDEMRLRFGHLFSDLRKS 751
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 780 bits (2015), Expect = 1.460e-266 Identity = 387/601 (64.39%), Postives = 461/601 (76.71%), Query Frame = 1
Query: 1 KGAPVQNKNALHGGNYSLDLYSILLERDVGEVEFDKWVSGDTEPPALTLLHLEKWVYVTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPRRDRF--------GSSLDVAIEHRVRTYRKFRRISEMKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSCWDSLSLPAHGIIIRTWCSASMGGLDPDGFERDQATRLMELHNALGLKFYRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALVNMETVPVFGHMDEVEEFDGHNVEDWTLYIIKLDALGEPDVFLVADMTPVFGRNYKRYLDLIDNAPRHRITHFVRPSRTVSRCHIPKLVGDLLAHELGDPLLEDADCARRFKEGIFVRASGMLQQRFADRIDAVMVTSSEEASAVGGKIVPVLCEVDRVKAELRTG--QGDLEIESIRTVDAYLCFEAERTW*RDGFWALGALILDETRLRVLEARNALESCGAYDFSYQCDAVFFKGSSSVQKKMRLRFDHLFSGVEKTP 1767
KG NAL GGNY +LYSI+LERDVG EF W+SG+ PA+T+ HL+KW+ TKASVVVWSHRG+GA ++G T+LRP +HVGVREGHVYRLVL+GP +DRF G SL VA+EH VRT R FRRI+E EE E + + + F AD+ I+ +QT D Q +KR+ G K KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPAHGIIIRTWC ASMGGLDPD E D+ATRL+ELH LG K RGV+DFRVSS+YS SLLALLEVCWRGPIVGAEDASG++YG DWQCDINGAHTAA+++ME +P F HMDEV+ FDGH++EDWTLY+++L+A+G+PDVFL AD+TPVFGRNYKRYL LI HR++HFVRP+RT+ +CHIP+LV DLLA +LG+PLL+D D ARRFK+G+FVR SG+LQQR ADRI+AVMVT+S+EA AVGGKIVPVL EV+R+K+ELR G L IE + + DAYLCFEA R W RDGFWALG LILDETRLRVLE RN LE+CG FSYQCDAVFF+G VQ++ R ++H FSG K P
Sbjct: 262 KGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTD---QQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARHLYEHCFSGELKAP 859 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8253.19603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8253.19603.1 >prot_Ecto-sp13_S_contig8253.19603.1 ID=prot_Ecto-sp13_S_contig8253.19603.1|Name=mRNA_Ecto-sp13_S_contig8253.19603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp MKEEEEEPDTTGYGAKTFSCVADIVSDIMAINQTGGDHNRQPVGKKRKHGback to top mRNA from alignment at Ecto-sp13_S_contig8253:4831..6597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8253.19603.1 ID=mRNA_Ecto-sp13_S_contig8253.19603.1|Name=mRNA_Ecto-sp13_S_contig8253.19603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1767bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8253:4831..6597- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8253:4831..6597- >mRNA_Ecto-sp13_S_contig8253.19603.1 ID=mRNA_Ecto-sp13_S_contig8253.19603.1|Name=mRNA_Ecto-sp13_S_contig8253.19603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1158bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8253:4831..6597- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |