prot_Ecto-sp13_S_contig8253.19602.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8253.19602.1
Unique Nameprot_Ecto-sp13_S_contig8253.19602.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
BLAST of mRNA_Ecto-sp13_S_contig8253.19602.1 vs. uniprot
Match: A0A6H5JCN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCN5_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 2.080e-49
Identity = 83/102 (81.37%), Postives = 88/102 (86.27%), Query Frame = 0
Query:    3 PIDTSAQWTDHAVEEPLRAEPTTCSNCEKPRELSWFFYGGGTRRSVVLDHMFRQHRCKKYANKPRGEFKPTDEKVKTITKDGLLKAVRTEAERVAKKASDGS 104
            P DTSAQWT+HAVEEPLRAEP TCSNCE+PRELSWFFYGGGTRR VVLDH    HRC KYA KPRG FKPTDEKVKTITKDG+ KAVR EA+R AKKAS G+
Sbjct:  397 PADTSAQWTEHAVEEPLRAEPATCSNCEEPRELSWFFYGGGTRRVVVLDHKVGLHRCNKYAIKPRGVFKPTDEKVKTITKDGIRKAVRREAKRGAKKASGGN 498          
BLAST of mRNA_Ecto-sp13_S_contig8253.19602.1 vs. uniprot
Match: A0A6H5KU89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU89_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 4.520e-49
Identity = 79/104 (75.96%), Postives = 88/104 (84.62%), Query Frame = 0
Query:    1 MSPIDTSAQWTDHAVEEPLRAEPTTCSNCEKPRELSWFFYGGGTRRSVVLDHMFRQHRCKKYANKPRGEFKPTDEKVKTITKDGLLKAVRTEAERVAKKASDGS 104
            M P DTSAQW DHA EEPL+AE +TCSNCE+ RELS FFYGGGTRR +VLDHM  +HRC K+ANKPRG FKP+DEKVKTIT DGLLKAVR EA+ VAKKAS G+
Sbjct:   65 MRPTDTSAQWVDHAFEEPLQAEASTCSNCEEARELSLFFYGGGTRRVMVLDHMVGKHRCNKHANKPRGVFKPSDEKVKTITDDGLLKAVRREAKGVAKKASGGN 168          
BLAST of mRNA_Ecto-sp13_S_contig8253.19602.1 vs. uniprot
Match: A0A6H5KI34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI34_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.570e-48
Identity = 82/106 (77.36%), Postives = 86/106 (81.13%), Query Frame = 0
Query:    3 PIDTSAQWTDHAVEEPLRAEPTTCSNCEKPRELSWFFYGGGTRRSVVLDHMF----RQHRCKKYANKPRGEFKPTDEKVKTITKDGLLKAVRTEAERVAKKASDGS 104
            P DTSAQWT+HAVEE L+AEP TCSNC KPRELSWFFYGGG RR VVLDHM        RC K+ANKPRG FKPTDEKVKTITKDGLLKAV  EA RVAKKAS G+
Sbjct:   58 PADTSAQWTNHAVEESLKAEPATCSNCGKPRELSWFFYGGGQRRVVVLDHMVVGGSGTVRCNKHANKPRGVFKPTDEKVKTITKDGLLKAVGREATRVAKKASGGN 163          
BLAST of mRNA_Ecto-sp13_S_contig8253.19602.1 vs. uniprot
Match: A0A6H5KK46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK46_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.990e-37
Identity = 72/92 (78.26%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    3 PIDTSAQWTDHAVEEPLRAEPTTCSNCEKPRELSWFFYGGGTRRSVVLDHMFRQH----RCKKYANKPRGEFKPTDEKVKTITKDGLLKAVR 90
            P DTSAQWTD AVEEPLRAEPTTCS+CE+ RELS FFYGGGTRR VVLDHM        RC KYANKPRG F  +DEKVKTITKDGLLKAVR
Sbjct:  379 PADTSAQWTDPAVEEPLRAEPTTCSSCEELRELSLFFYGGGTRRVVVLDHMVGGESGGVRCNKYANKPRGVFMSSDEKVKTITKDGLLKAVR 470          
BLAST of mRNA_Ecto-sp13_S_contig8253.19602.1 vs. uniprot
Match: D7G6J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J6_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 8.850e-37
Identity = 72/108 (66.67%), Postives = 80/108 (74.07%), Query Frame = 0
Query:    1 MSPIDTSAQWTDHAVEEPLRAEPTTCSNCEKPRELSWFFYGGGTRRSVVLDHMFRQH----RCKKYANKPRGEFKPTDEKVKTITKDGLLKAVRTEAERVAKKASDGS 104
            M P DTSA+W   AVEE L+AE  TCSNC +PR+LSWFFYGGG RR VVLDHM        RC KY NKPRG F PT++ VKTITKDGLLKAV  EA+RVA KAS G+
Sbjct:  411 MRPTDTSARWMYQAVEESLQAEEATCSNCGEPRKLSWFFYGGGKRRVVVLDHMVGGESGGVRCNKYPNKPRGVFTPTNKNVKTITKDGLLKAVGREAKRVANKASGGN 518          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8253.19602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JCN5_9PHAE2.080e-4981.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU89_9PHAE4.520e-4975.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI34_9PHAE1.570e-4877.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KK46_9PHAE1.990e-3778.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6J6_ECTSI8.850e-3766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8253contigEcto-sp13_S_contig8253:506..823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8253.19602.1mRNA_Ecto-sp13_S_contig8253.19602.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8253 433..1117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8253.19602.1 ID=prot_Ecto-sp13_S_contig8253.19602.1|Name=mRNA_Ecto-sp13_S_contig8253.19602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
MSPIDTSAQWTDHAVEEPLRAEPTTCSNCEKPRELSWFFYGGGTRRSVVL
DHMFRQHRCKKYANKPRGEFKPTDEKVKTITKDGLLKAVRTEAERVAKKA
SDGSN*
back to top