mRNA_Ecto-sp13_S_contig1235.1960.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1235.1960.1
Unique NamemRNA_Ecto-sp13_S_contig1235.1960.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: D7FYM1_ECTSI (NLE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM1_ECTSI)

HSP 1 Score: 551 bits (1420), Expect = 2.020e-189
Identity = 342/347 (98.56%), Postives = 343/347 (98.85%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVALKRAKA 1044
            TMPGHTEA   VNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVS+FTPEEAQ VALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVALKRAKA
Sbjct:  150 TMPGHTEAXXXVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSKFTPEEAQAVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVALKRAKA 496
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: A0A836CH64_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH64_9STRA)

HSP 1 Score: 439 bits (1130), Expect = 8.700e-146
Identity = 285/347 (82.13%), Postives = 306/347 (88.18%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVALKRAKA 1044
            TMPGHTEAVLHV+YSPDG+ LASGGGDMTVRFWDV T  PRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP+ G   G PL +HKQWVTSL+WEP+H+N+A ERLASSSKD L+K+WN RTGRC VTLSGHADSVE + WGGEGLLYSASRDR I VW+++GEGRK GILVRTL GHGHRVNTLALSCE  LRTGPFG      K V+  TPEEAQ  AL RY  A+G +PERLVSGSDDFTLFLWNPV+ KKPLARLTGHQQ VNH+AFSPDGRRFASASFDKKVKVWDGRTG FL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEM++LKRAKA
Sbjct:  143 TMPGHTEAVLHVSYSPDGSQLASGGGDMTVRFWDVNTCTPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGQPIGSPLVSHKQWVTSLSWEPMHKNAACERLASSSKDGLVKVWNVRTGRCLVTLSGHADSVECVKWGGEGLLYSASRDRNIMVWSMDGEGRKFGILVRTLAGHGHRVNTLALSCEYVLRTGPFGH-----KPVTFATPEEAQAAALARYQEAKGTDPERLVSGSDDFTLFLWNPVEDKKPLARLTGHQQAVNHIAFSPDGRRFASASFDKKVKVWDGRTGKFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMISLKRAKA 484
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: A0A7S3XZG7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZG7_HETAK)

HSP 1 Score: 362 bits (928), Expect = 2.500e-115
Identity = 218/309 (70.55%), Postives = 242/309 (78.32%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAG--ERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRF-TPEEAQTVALERYNLARGGEP--ERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLA 915
            T+ GHTEAVLHV ++PDG  LASGGGD  VRFWDV T LP+ T  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP+    QGQPL+ H+QWVTSLAWEPLHR      ERLAS+SKD   KIWN RTGRCE++LSGH DSVE + WGGEGL+Y+ASRDRTIKVW+ +  G KLG LVRTLVGHGHRVNTLALS +  LRTGPF          +RF +PE A   A ERYN  +  +P  ERLVSGSDDFTL LW+P +GK+P+ RLTGHQQ VNHL FSPDGR FASASFDKKVKVWDGRTG F A
Sbjct:  149 TLVGHTEAVLHVAFAPDGKRLASGGGDGAVRFWDVHTCLPKHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASARPQGQPLTGHRQWVTSLAWEPLHRRRPHPCERLASASKDGTCKIWNVRTGRCEISLSGHTDSVECVKWGGEGLIYTASRDRTIKVWDAD-VGPKLGTLVRTLVGHGHRVNTLALSSDYVLRTGPFDHHG------NRFASPEAAADAAEERYNTFKATQPGPERLVSGSDDFTLILWSPTEGKRPVTRLTGHQQAVNHLQFSPDGRHFASASFDKKVKVWDGRTGKFKA 450
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: A0A482SD67_9ARCH (NLE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SD67_9ARCH)

HSP 1 Score: 354 bits (909), Expect = 6.330e-112
Identity = 208/307 (67.75%), Postives = 239/307 (77.85%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRFTPEEAQTVALERYNL---ARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLA 915
            TMPGHT++VLHV+YSP G  LASGGGDMTVRFW+V T+LP  TC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G Q+GQPL  HK+WVT+LA+EPLH N+   R+ASSSKD  +KIWN  TG CE T+SGHADSVE + WGG GLLY+ASRDRTI+VW V+G GR   +LVRTLVGH HR+NTLAL+ +   RTG F   +      +  TPEEAQ VAL+RY       GG+ ERLVSGSDDFTLF+W P + K PL R+ GHQQ VNH+AFSPDGR  ASASFDKKVK+W G+TG FLA
Sbjct:  192 TMPGHTDSVLHVSYSPSGQRLASGGGDMTVRFWNVITNLPMHTCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGTQRGQPLRGHKKWVTALAFEPLHLNAHSTRMASSSKDQTVKIWNLSTGLCESTISGHADSVECVKWGGTGLLYTASRDRTIRVWAVDGHGRSQHMLVRTLVGHAHRINTLALNTDYLFRTGSFELAQ----TNANLTPEEAQQVALKRYQTLVGGEGGQGERLVSGSDDFTLFMWQPTENKTPLIRMIGHQQLVNHIAFSPDGRYLASASFDKKVKLWCGKTGRFLA 494
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: A0A7S1G396_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G396_9STRA)

HSP 1 Score: 349 bits (896), Expect = 1.360e-109
Identity = 205/307 (66.78%), Postives = 238/307 (77.52%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPF---GKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLA 915
            T+PGHT+AVLHV++SPDG +LASGGGD TVRFWDV TS P++TCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP  G +  +PL  HKQW+TSLAWEP+H N A ERLASSSKD  +K+WN RT     +LSGH DSVE + WGGEGLLY+ASRDR+IKVW+ E  G+    LVRTLVGH HR+NTLALS +   RTGPF   GK+  ++        EEA   A +RY  A+   PERL+SGSDDFTLFLW P   K+P+ R+TGHQQ VNH+AFSPDGR  ASASFDKKV+VWDGR G F+A
Sbjct:  232 TLPGHTDAVLHVSFSPDGLLLASGGGDATVRFWDVNTSTPKYTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTGKEVCKPLKGHKQWITSLAWEPMHSNGACERLASSSKDKTVKVWNVRTASIVASLSGHTDSVECVKWGGEGLLYTASRDRSIKVWSPEERGK----LVRTLVGHAHRINTLALSTDYVCRTGPFDHTGKKPASV--------EEAVEAAKKRYAEAKAQGPERLISGSDDFTLFLWEPATSKRPIERMTGHQQLVNHIAFSPDGRYAASASFDKKVRVWDGRRGKFVA 526
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: A0A8K1CSV3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSV3_PYTOL)

HSP 1 Score: 339 bits (869), Expect = 8.720e-107
Identity = 202/304 (66.45%), Postives = 230/304 (75.66%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLA 915
            T+ GH+EA+LHV++SPDG  LASGGGD TVRFWD  TS+P+ TC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S G   GQPL AHKQWV SL+WEP+HRN++ E                RTGR   +LSGH DSVE + WGGEGLLYSASRDRTIKVW +E +G  +G LVRTLVGHGHR+NTLAL+ +   R+GPFG      K  SR   EE Q  A ERYN  R  +PERLVSGSDDFTLF W P + KKP+ RL GHQQPVNHL+FSPDGR FASASFDKKVK+W+G+TG F+A
Sbjct:  132 TLQGHSEAILHVSFSPDGKRLASGGGDATVRFWDTNTSMPKQTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGQPIGQPLKAHKQWVNSLSWEPMHRNASCEXXXXXXXXXXXXXXXXRTGRMLTSLSGHTDSVECVKWGGEGLLYSASRDRTIKVWAME-DGDHVGKLVRTLVGHGHRINTLALNVDYVCRSGPFGHSN--QKFASR---EEMQQAAQERYNAVRKNQPERLVSGSDDFTLFFWEPAENKKPIERLVGHQQPVNHLSFSPDGRYFASASFDKKVKIWNGQTGKFIA 429
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: M4BAL9_HYAAE (NLE domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAL9_HYAAE)

HSP 1 Score: 336 bits (861), Expect = 2.930e-105
Identity = 202/303 (66.67%), Postives = 226/303 (74.59%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFL 912
            T+ GH EAVLHV++SPDG  LASGGGD TVRFWD  T +P+ T RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP  G Q GQP+  HKQWV SL WEP+HRNS  ER                TGR   +LSGH DSVE I WGGEGL+YSASRDRTIKVW +EG+   +G LVRTLVGHGHR+NTLAL+ +   R+GPFG      K  S  + EE Q  AL+RY   R G+ ERLVSGSDDFTLF W P + KKPLARLTGHQQPVNHL+FSPDGR FASASFDKKVK+W+G TG F+
Sbjct:  138 TLQGHAEAVLHVSFSPDGKRLASGGGDATVRFWDTNTCMPKHTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLMGKQIGQPMKGHKQWVNSLTWEPMHRNSTCERXXXXXXXXXXXXXXXXTGRAIASLSGHTDSVECIKWGGEGLMYSASRDRTIKVWAMEGD--HVGKLVRTLVGHGHRINTLALNVDYVCRSGPFG-----YKTNSFASREEMQHAALKRYEEVRNGQTERLVSGSDDFTLFFWEPSESKKPLARLTGHQQPVNHLSFSPDGRYFASASFDKKVKIWNGHTGKFV 433
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: A0A662WZJ2_9STRA (NLE domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZJ2_9STRA)

HSP 1 Score: 335 bits (859), Expect = 5.820e-105
Identity = 199/303 (65.68%), Postives = 227/303 (74.92%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFL 912
            T+ GH+EA+LHV++SPDG  LASGGGD TVRFWD  T +P+ T RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP  G Q GQP+  HKQWV SL WEP+HRN+  E                   RC  +LSGH DSVE I WGGEGLLYSASRDRTIKVW +EGE   +G LVRTL+GHGHR+NTLAL+ +   R+GPFG       + S  + EE Q  AL+RY   R G+PERLVSGSDDFTLF W P + KKPLARLTGHQQPVNHL+FSPDGR FASASFDKKVK+W+G+TG F+
Sbjct:  162 TLQGHSEAILHVSFSPDGKKLASGGGDATVRFWDTNTCMPKHTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVTGKQFGQPMKGHKQWVNSLTWEPMHRNATCEXXXXXXXXXXXXXXXXXXXRCVASLSGHTDSVECIKWGGEGLLYSASRDRTIKVWEMEGE--HVGKLVRTLIGHGHRINTLALNVDYVCRSGPFGHA-----SRSFSSREEMQEAALKRYQEVRKGQPERLVSGSDDFTLFFWEPAESKKPLARLTGHQQPVNHLSFSPDGRFFASASFDKKVKIWNGQTGKFV 457
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: M4BAL8_HYAAE (NLE domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAL8_HYAAE)

HSP 1 Score: 336 bits (861), Expect = 1.850e-103
Identity = 202/303 (66.67%), Postives = 226/303 (74.59%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTGPFGKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFL 912
            T+ GH EAVLHV++SPDG  LASGGGD TVRFWD  T +P+ T RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP  G Q GQP+  HKQWV SL WEP+HRNS  ER                TGR   +LSGH DSVE I WGGEGL+YSASRDRTIKVW +EG+   +G LVRTLVGHGHR+NTLAL+ +   R+GPFG      K  S  + EE Q  AL+RY   R G+ ERLVSGSDDFTLF W P + KKPLARLTGHQQPVNHL+FSPDGR FASASFDKKVK+W+G TG F+
Sbjct:  138 TLQGHAEAVLHVSFSPDGKRLASGGGDATVRFWDTNTCMPKHTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLMGKQIGQPMKGHKQWVNSLTWEPMHRNSTCERXXXXXXXXXXXXXXXXTGRAIASLSGHTDSVECIKWGGEGLMYSASRDRTIKVWAMEGD--HVGKLVRTLVGHGHRINTLALNVDYVCRSGPFG-----YKTNSFASREEMQHAALKRYEEVRNGQTERLVSGSDDFTLFFWEPSESKKPLARLTGHQQPVNHLSFSPDGRYFASASFDKKVKIWNGHTGKFV 433
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BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Match: B8CAU3_THAPS (NLE domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAU3_THAPS)

HSP 1 Score: 328 bits (841), Expect = 1.020e-101
Identity = 202/312 (64.74%), Postives = 232/312 (74.36%), Query Frame = 1 
Query:    4 TMPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGLLYSASRDRTIKVWNVE-GEG---RKLGILVRTLVGHGHRVNTLALSCEAALRTGPF---GKEECALK-AVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGTFLA 915
            T+PGHT+A+LHV+YSPDG  LASGGGD TVRFWDV TS PR TC+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        P+HRNS  ERL +SSKD L KIWN RT RCE TL+GH DS+E + WGGEGL+Y+ASRDRTIKVWN E G+G    ++GILV+TL GHGHRVNTLA+SC+   RTGPF   GK + A K   S+   E A   +L +Y   +G EPERL+SGSDDFTL LW+P + KKPL RLTGHQQ VNHLAFSPD R FASASFDKK+KVW+GR+G F+A
Sbjct:  191 TLPGHTDAILHVSYSPDGKHLASGGGDATVRFWDVFTSTPRHTCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXPMHRNSKCERLVTSSKDGLAKIWNVRTKRCEATLAGHVDSIESVKWGGEGLIYTASRDRTIKVWNAEDGQGVSASRVGILVKTLTGHGHRVNTLAVSCDYICRTGPFDHYGKIDVASKDRDSQEWREAAYQTSLSKYKAFKGSEPERLISGSDDFTLLLWHPTESKKPLKRLTGHQQAVNHLAFSPDSRFFASASFDKKIKVWNGRSGDFVA 501
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1235.1960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYM1_ECTSI2.020e-18998.56NLE domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CH64_9STRA8.700e-14682.13WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S3XZG7_HETAK2.500e-11570.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482SD67_9ARCH6.330e-11267.75NLE domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A7S1G396_9STRA1.360e-10966.78Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A8K1CSV3_PYTOL8.720e-10766.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BAL9_HYAAE2.930e-10566.67NLE domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A662WZJ2_9STRA5.820e-10565.68NLE domain-containing protein n=2 Tax=Nothophytoph... [more]
M4BAL8_HYAAE1.850e-10366.67NLE domain-containing protein n=1 Tax=Hyaloperonos... [more]
B8CAU3_THAPS1.020e-10164.74NLE domain-containing protein n=1 Tax=Thalassiosir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1235contigEcto-sp13_S_contig1235:69..3243 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score545.8
Seed ortholog evalue1.6e-152
Seed eggNOG ortholog2880.D7FYM1
Preferred nameNLE1
Model size1721
KEGG koko:K07375,ko:K14855
KEGG Pathwayko04145,ko04540,ko05130,map04145,map04540,map05130
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000151,GO:0001501,GO:0001655,GO:0001701,GO:0001756,GO:0001822,GO:0001824,GO:0001825,GO:0001826,GO:0003002,GO:0003674,GO:0003779,GO:0005102,GO:0005112,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005840,GO:0005856,GO:0005884,GO:0005938,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007346,GO:0007389,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0009553,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009892,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010466,GO:0010564,GO:0010605,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010948,GO:0010951,GO:0015629,GO:0016043,GO:0019222,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030036,GO:0030042,GO:0030111,GO:0030154,GO:0030162,GO:0030177,GO:0030479,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030836,GO:0030837,GO:0030863,GO:0030864,GO:0031323,GO:0031324,GO:0031333,GO:0031461,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032535,GO:0032956,GO:0032970,GO:0032984,GO:0032991,GO:0033043,GO:0034622,GO:0035282,GO:0042254,GO:0042255,GO:0042273,GO:0042592,GO:0042641,GO:0042643,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043242,GO:0043243,GO:0043244,GO:0043254,GO:0043281,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044877,GO:0045786,GO:0045861,GO:0045930,GO:0048229,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048646,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051015,GO:0051016,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051261,GO:0051302,GO:0051336,GO:0051346,GO:0051493,GO:0051494,GO:0051495,GO:0051693,GO:0051716,GO:0051726,GO:0051782,GO:0052547,GO:0052548,GO:0060255,GO:0060429,GO:0060548,GO:0060828,GO:0061053,GO:0061484,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070925,GO:0071826,GO:0071840,GO:0071944,GO:0072001,GO:0080008,GO:0080090,GO:0090066,GO:0090263,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0110053,GO:1901879,GO:1901880,GO:1901881,GO:1902494,GO:1902903,GO:1902904,GO:1902905,GO:1990234,GO:1990904,GO:2000116,GO:2000117,GO:2001233,GO:2001234,GO:2001267,GO:2001268
Exons7
EggNOG free text desc.ribosomal large subunit assembly
EggNOG OGsKOG0271@1,KOG0271@2759
Cds size1146
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03036,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1235.1960.1prot_Ecto-sp13_S_contig1235.1960.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1235 638..3237 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462657.27387-UTR-Ecto-sp13_S_contig1235:68..6371681462657.27387-UTR-Ecto-sp13_S_contig1235:68..637Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1235 69..637 -
1681462657.3490489-UTR-Ecto-sp13_S_contig1235:3237..32431681462657.3490489-UTR-Ecto-sp13_S_contig1235:3237..3243Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1235 3238..3243 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462657.283872-CDS-Ecto-sp13_S_contig1235:637..7551681462657.283872-CDS-Ecto-sp13_S_contig1235:637..755Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1235 638..755 -
1681462657.2917464-CDS-Ecto-sp13_S_contig1235:1057..13901681462657.2917464-CDS-Ecto-sp13_S_contig1235:1057..1390Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1235 1058..1390 -
1681462657.2998805-CDS-Ecto-sp13_S_contig1235:1551..17631681462657.2998805-CDS-Ecto-sp13_S_contig1235:1551..1763Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1235 1552..1763 -
1681462657.3086271-CDS-Ecto-sp13_S_contig1235:2064..21871681462657.3086271-CDS-Ecto-sp13_S_contig1235:2064..2187Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1235 2065..2187 -
1681462657.318448-CDS-Ecto-sp13_S_contig1235:2421..26061681462657.318448-CDS-Ecto-sp13_S_contig1235:2421..2606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1235 2422..2606 -
1681462657.3283076-CDS-Ecto-sp13_S_contig1235:2763..28491681462657.3283076-CDS-Ecto-sp13_S_contig1235:2763..2849Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1235 2764..2849 -
1681462657.3394597-CDS-Ecto-sp13_S_contig1235:3148..32371681462657.3394597-CDS-Ecto-sp13_S_contig1235:3148..3237Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1235 3149..3237 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1235.1960.1

>prot_Ecto-sp13_S_contig1235.1960.1 ID=prot_Ecto-sp13_S_contig1235.1960.1|Name=mRNA_Ecto-sp13_S_contig1235.1960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
MPGHTEAVLHVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRGHRHHV
LCTAWAPNGRRFASADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEP
LHRNSAGERLASSSKDALIKIWNTRTGRCEVTLSGHADSVEKIIWGGEGL
LYSASRDRTIKVWNVEGEGRKLGILVRTLVGHGHRVNTLALSCEAALRTG
PFGKEECALKAVSRFTPEEAQTVALERYNLARGGEPERLVSGSDDFTLFL
WNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKKVKVWDGRTGT
FLATLNGHVSAVYQVAWSADSRLLVSASKDSTVKLWEMVALKRAKATLPG
HADEVYALDWSPDGSAVASGSKDRTIKIWAH*
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mRNA from alignment at Ecto-sp13_S_contig1235:69..3243-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1235.1960.1 ID=mRNA_Ecto-sp13_S_contig1235.1960.1|Name=mRNA_Ecto-sp13_S_contig1235.1960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3175bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1235:69..3243- (Ectocarpus species13 EcNAP12_S_4_19m)
NNCACCATGCCTGGACACACGGAGGCTGTCCTCCACGTGAACTACAGCCC
AGATGGAACCATGCTTGCAAGCGGGGGCGGAGATATGACCGTCAGGTGAG
TTCGACGCCTGTCGGGGGTATGCCGTACCATGGTGTCATTTTCTGTGTAG
ATCTGCCGCTGCTTGCGCTCTCAACGCTTCGACCGGAGTTGAGTGTTTGG
TCGGAGCTATCGCGGCTCTTGTTTTTTTTTCTCAAGGCACTCCTGGCGTG
CAGTCAATGTATCTCGCGTCTTGGGTGCTCTCCGCGTCGTCTCGCGGTAC
GCACCGCCGTAGCACAACACAATTCCTGGACGTGCGACCCCCCAGTTGTA
CTTCCTCCCTGCTTCCCCCACACGCTTGTCAATCAACTCCGCAGGTTTTG
GGACGTGCAGACATCCCTTCCTCGCTTCACATGTAGAGGGCATCGCCACC
ATGTCCTATGCACCGCGTGGGCGCCAAACGGTGGGTCGTGCGCCTTGAGG
CTCCCAGAGGCGTTATTCTCCCTAGTGCAGCCATCAGTTTTGGGATCGTT
TTTGTTACACGTTCAGAATGTGAAACGCATAACGCCGTATTTATCCATGG
CTGCATGTTTCATTTTTGTTCTGGGTTTGCTCGCCAGGGAGACGTTTCGC
GTCTGCCGACAGGAAGGGCGAGATTCGGCTATGGGACCCCTCAAAGGGGG
TGCAGCAGGGCCAACCCCTGTCTGCGCACAAGCAATGGGTCACGTCGCTC
GCGTGGGAACCCTTGCATCGAAATTCCGCTGGGGAACGGCTCGCCAGTTC
GTCCAAAGACGCCCTCATCAAGGTTGATGATCTAGCGCGTGATCGTGTCA
GTGTGGAGAGGGATGATGTTAGGATGTGTTTCGATGACGAAGACTTCATT
TTCATTGTTCGTCTAAATTTCATAATCCAAGAGCGTGTGCATCTTCGGAC
AAGGCGTAAGTGTGTATCCGGCCCTTGTGCGTAGCGAAGCAGTAGTATCT
CTGGCATTCCTTTGAAGCACACTTTCCGCGCTGTGCTTCTGTTACGGCTC
TGACAGATCTGGAATACGCGGACTGGTCGCTGCGAAGTTACACTCTCCGG
ACACGCCGACTCCGTCGAGAAAATCATCTGGGGAGGGGAAGGGCTGCTGT
ACTCCGCAAGTCGGGATCGCACTATTAAGGTGAGCCTGGGAGTCTTGGGC
ACCGTTCGGCGAATCTGTCGACGTATGTGCACGTTCTGTTTGTTTCTCCA
ATTCAACAGATTAGTGCGATATGCTCAACAAATTTGACTTAGCTGTAAGG
TTTTAGGGAGTATGACGTCTCTATGCTTAGTGAGGGCATGCACAATTTGC
ACTGCTGAAGTAAACGTGTTTTGAGCTTTTTCTGCAGGTTTTTTTACGAA
AGCCATACAAGGCGGTGTACGCAACTCTTTTGTGTTGCCTGTTCCCGTGG
TGGATCTATCGTGCGCGTGGGACTACTTAGGTGTGGAATGTTGAGGGTGA
GGGCCGAAAGCTGGGAATTTTGGTTCGAACGCTCGTCGGGCATGGCCACC
GGGTCAACACCTTGGCCCTCAGCTGCGAAGCGGCACTGCGGACGGGTCCT
TTCGGAAAGGAGGAGTGCGCGCTCAAGGCGGTGTCCAGGTTTACTCCAGA
AGAGGCTCAAACCGTCGCTCTCGAACGCTACAATCTGGCAAGGTAAAGTG
AAGAATCGTCTCGAGTGTTTTCCTTAGGCATCACGATCTTCAAAATATTT
TTTTTAACCATTTGCCGGTTCTTCAAGTTGGTCAAAGATGCTCACAGGGT
TACATCCTATATTCAAAGGTTCCCCTCGTAATCGATTGACCTCTGGCCAA
CAGGGGAGGGGAACCCGAGCGATTGGTATCAGGCTCCGACGACTTCACGC
TTTTCCTCTGGAATCCAGTTGACGGCAAGAAGCCGTTGGCACGCCTGACT
GGCCACCAGCAACCGGTGAATCACCTCGCCTTCAGCCCGGACGGACGGCG
TTTCGCGAGCGCCTCGTTTGATAAGAAGGTCAAGGTGTGGGACGGCCGCA
CGGGCACGTTTCTCGCGACGCTAAACGGGCACGTGAGCGCGGTGTACCAG
GTCGCGTGGTCTGCGGACAGCCGGCTCCTCGTTAGCGCCTCGAAGGACAG
CACAGTCAAGCTGTGGGAAATGGTGGCGCTCAAGAGGTGAAACGCTTTAA
CCAGAGTTTTGTGCGCTGAAAAAAACGAGTCTTGAACTGATTTTCTCAGC
AGCGAGAAGTATCCTTCGATTGACGTTCCTGCCTTTCTGAGCAGGTCGTG
GTTCTTAGTCGCCCCTTGCCGCAACGCTGCAAGCAACCCACTCTGGTCAT
GCCTCGCCAATATTAACAGGTCGAGATGGAGTATGGCATGTTTTACTTGA
TGAGGGTCATGGTACTTGAGCACACATGCTGCCCATGAAACAAAACACAC
CCACACGAGCCATTCCCTCAACGCCGATTGCACCTCAGGGCGAAGGCGAC
TCTTCCAGGGCACGCCGACGAAGTTTATGCTCTCGACTGGTCTCCCGACG
GATCTGCCGTTGCCTCCGGCAGCAAAGACCGGACTATCAAGATTTGGGCA
CACTGACGAGCATTTGCTCGTGTTGTGGGCTTGTTGCATGGTTTGGCGAT
TAGCCGGCGAGCAAAGGCAGCGGTTTCCACGGTTTTCATGTCTTGAAGTT
CTGACCTGATGCTCGTCTTCATACTTACACAAAAATTACGCCCGCAAGCG
CTTCAAGAGAGATGCCCCTGTGATTGTCGCTGTGGTTGCGTTTTGTTCTC
GCTTCGGAAGAGCTCTTGTATCTGGAAAAAGAGTGCGGCCATAGGTCCGC
CAGGCGGTCGTACAGCAATGAAGTTCAAAACTTGAAATGTGGACGAATTC
TTGGCAATCACACCATGTTTCGAGACGTTGGCTGCGTGCTTTGGGACCTC
GGTTGCCGTCCGTGTAGGGTGCAACACAACTTGCGCACCGAATCATGGCC
GAGGTGCAGAGACGGAATCGACCAACTTGGGATCGTTGCGTCAGTTCTGA
TACGACTTTCTTTTGTCGCAGTCGTTTGTCAGGTGTCGGCCACTCTACCA
CCACGGTGTCGTTCCGTCTTGTATCCACGATTAGCGCAGTTTGCAGAAGC
ATCACGCCAGGTATACCGTGCGCCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1235:69..3243-

>mRNA_Ecto-sp13_S_contig1235.1960.1 ID=mRNA_Ecto-sp13_S_contig1235.1960.1|Name=mRNA_Ecto-sp13_S_contig1235.1960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1235:69..3243- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTGGACACACGGAGGCTGTCCTCCACGTGAACTACAGCCCAGATGG
AACCATGCTTGCAAGCGGGGGCGGAGATATGACCGTCAGGTTTTGGGACG
TGCAGACATCCCTTCCTCGCTTCACATGTAGAGGGCATCGCCACCATGTC
CTATGCACCGCGTGGGCGCCAAACGGGAGACGTTTCGCGTCTGCCGACAG
GAAGGGCGAGATTCGGCTATGGGACCCCTCAAAGGGGGTGCAGCAGGGCC
AACCCCTGTCTGCGCACAAGCAATGGGTCACGTCGCTCGCGTGGGAACCC
TTGCATCGAAATTCCGCTGGGGAACGGCTCGCCAGTTCGTCCAAAGACGC
CCTCATCAAGATCTGGAATACGCGGACTGGTCGCTGCGAAGTTACACTCT
CCGGACACGCCGACTCCGTCGAGAAAATCATCTGGGGAGGGGAAGGGCTG
CTGTACTCCGCAAGTCGGGATCGCACTATTAAGGTGTGGAATGTTGAGGG
TGAGGGCCGAAAGCTGGGAATTTTGGTTCGAACGCTCGTCGGGCATGGCC
ACCGGGTCAACACCTTGGCCCTCAGCTGCGAAGCGGCACTGCGGACGGGT
CCTTTCGGAAAGGAGGAGTGCGCGCTCAAGGCGGTGTCCAGGTTTACTCC
AGAAGAGGCTCAAACCGTCGCTCTCGAACGCTACAATCTGGCAAGGGGAG
GGGAACCCGAGCGATTGGTATCAGGCTCCGACGACTTCACGCTTTTCCTC
TGGAATCCAGTTGACGGCAAGAAGCCGTTGGCACGCCTGACTGGCCACCA
GCAACCGGTGAATCACCTCGCCTTCAGCCCGGACGGACGGCGTTTCGCGA
GCGCCTCGTTTGATAAGAAGGTCAAGGTGTGGGACGGCCGCACGGGCACG
TTTCTCGCGACGCTAAACGGGCACGTGAGCGCGGTGTACCAGGTCGCGTG
GTCTGCGGACAGCCGGCTCCTCGTTAGCGCCTCGAAGGACAGCACAGTCA
AGCTGTGGGAAATGGTGGCGCTCAAGAGGGCGAAGGCGACTCTTCCAGGG
CACGCCGACGAAGTTTATGCTCTCGACTGGTCTCCCGACGGATCTGCCGT
TGCCTCCGGCAGCAAAGACCGGACTATCAAGATTTGGGCACACTGA
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