mRNA_Ecto-sp13_S_contig825.19600.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig825.19600.1
Unique NamemRNA_Ecto-sp13_S_contig825.19600.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: A0A6H5J997_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE)

HSP 1 Score: 815 bits (2105), Expect = 1.200e-271
Identity = 638/853 (74.79%), Postives = 659/853 (77.26%), Query Frame = 1 
Query:    1 MDHDTAAEHSAREARGAGSSSSPAEDHNDDGTSRPDQQALRESHDMNQAAPAATVPPALPSHELPGTAVGTLPPQGSEVALQASTDSGGEAPTELKATSLESLILLSAEETGCDSGGSDGDRSQSEATTGSVSPAPAACFSSYATPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNIHADDAQQQHRPLQREGGVLIGGAQDDRPISDNPALTLSASSPSYESHHRLVQHTRRNVYEPHQPPAVLHPGGAATDLVAAAATTSTHLQFHAGGLQQPAFGNYNAHAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVLGGAGLPYHSYQSGFVLPFTGRAPLLSAPPPGGGIDRYDLVPLGAAYDPHHGHQRVCQPKHALHSRQQQFESGSPDALA------PAEHPRPDATAGAPQTLTEGVLTMPQSSSGGAASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKVMCDDLELSLRECAAKVIEEPFEQAARPADAFRLGNHPAFRGIGGXXXXXXXXXXXYDEAAGMAEAEAAEVARREQEALIVKDNARFPHNLITAKRKNRRTEGSAAPPAPDVNDEGAFPDINFASSAXXXXXXXXXXXXXXXXXXXXXQVPPGPSQG 2541
            M+HDTAAEHS RE   AGSSS PAED++DDGT RPDQQALRESH MNQAAPAATVPP LPSHELPGTA GTLP QG EVALQAS  SGGEAPTELKATSLES+IL  +EET CDSGGS  DRSQSEATTGSVSPAPAACFSS ATPAG    XXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXX                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      TNIHADDAQQ H+PLQREG VL+GGAQDDRPI DNPA TLSASSPS+ESHHRLVQHTRR+VYEPHQPPAVLHPG AATDLVAAAA TSTH +FH G LQQPAFGN++A+AQP                                                           PP    +  YDLVPLG  YDPHHGHQ V QP++ALH RQQQFE G PDALA      PAEHPRPDATAGAPQTLTEGVLTMPQSSSGGAASGG                                  D VQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFK+MCDDLELSLRECAAKV+EEPFEQAARPADAFRLGNHPAFRGIGG  XXXXX    YDEAAG+AEAEAAEVARREQEALIVKDNARFPHNLIT KRK+RRT+GSAAPPAPDVNDEGAFPDINFASSAXXXXXXXXXXXXXXXXXXXXXQVPP PSQG
Sbjct:    1 MNHDTAAEHSVRETGDAGSSSPPAEDNDDDGTYRPDQQALRESHVMNQAAPAATVPPVLPSHELPGTAAGTLPLQGFEVALQASAGSGGEAPTELKATSLESMILPISEETRCDSGGSYDDRSQSEATTGSVSPAPAACFSSDATPAGGEPPXXXXXXXXXXXXXXXXXXMFRQTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYSLPLXXXXXXXXXXXXXXXXXXXXXXXXXXARMMASPSAKELPSSGSRATAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEGGDTNIHADDAQQ-HQPLQREGRVLVGGAQDDRPIPDNPASTLSASSPSHESHHRLVQHTRRHVYEPHQPPAVLHPGHAATDLVAAAAATSTHGKFHPGELQQPAFGNHDAYAQP-----------------------------------------------------------PPAAAAV--YDLVPLGVVYDPHHGHQHVYQPQYALHPRQQQFELGRPDALASAATMTPAEHPRPDATAGAPQTLTEGVLTMPQSSSGGAASGGVRGGAPAPAPVLGTAAGVLATPAAGGRADG----DVVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKMMCDDLELSLRECAAKVVEEPFEQAARPADAFRLGNHPAFRGIGGAGXXXXXEDGDYDEAAGIAEAEAAEVARREQEALIVKDNARFPHNLITTKRKSRRTQGSAAPPAPDVNDEGAFPDINFASSAXXXXXXXXXXXXXXXXXXXXXQVPPSPSQG 787
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: D7FRG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG8_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 2.000e-62
Identity = 110/126 (87.30%), Postives = 114/126 (90.48%), Query Frame = 1 
Query: 2074 MCDDLELSLRECAAKVIEEPFEQAARPADAFRLGNHPAFRGIGGXXXXXXXXXXXYDEAAGMAEAEAAEVARREQEALIVKDNARFPHNLITAKRKNRRTEGSAAPPAPDVNDEGAFPDINFASSA 2451
            MCDDLEL LRECAAKV+EEPFEQAARPADAFRLGNHPAFRGIGG           Y+EAAG+AEAEAAEVARREQEALIVKDNARFPHNLITAKRKNRRT+GSAAPPAPDVNDEGAFPDINFASSA
Sbjct:    1 MCDDLELGLRECAAKVVEEPFEQAARPADAFRLGNHPAFRGIGGTGAGGAGEDGDYNEAAGIAEAEAAEVARREQEALIVKDNARFPHNLITAKRKNRRTQGSAAPPAPDVNDEGAFPDINFASSA 126
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: D7FRG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG9_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 7.330e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 
Query: 1798 DAVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARK 2061
            DAVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARK
Sbjct:   47 DAVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARK 134
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: A0A6H5J9A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9A8_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 8.380e-45
Identity = 94/110 (85.45%), Postives = 96/110 (87.27%), Query Frame = 1 
Query:    1 MDHDTAAEHSAREARGAGSSSSPAEDHNDDGTSRPDQQALRESHDMNQAAPAATVPPALPSHELPGTAVGTLPPQGSEVALQASTDSGGEAPTELKATSLESLILLSAEE 330
            MDHDTAAEHS RE  GAGSSS PA D+NDDGTSRPDQQALRESHDMNQAAPAATVPP LPSHELPGTAVGTLP QG EVALQAS  SGGEAPTEL ATSLES+IL   EE
Sbjct:    1 MDHDTAAEHSLRETGGAGSSSPPAGDNNDDGTSRPDQQALRESHDMNQAAPAATVPPVLPSHELPGTAVGTLPLQGFEVALQASVGSGGEAPTELNATSLESMILPIGEE 110
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: A0A2N8ZHG5_9VIBR (Uncharacterized protein n=1 Tax=Vibrio tapetis subsp. tapetis TaxID=1671868 RepID=A0A2N8ZHG5_9VIBR)

HSP 1 Score: 62.4 bits (150), Expect = 5.080e-8
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 1 
Query: 1822 NDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKVMCDDLELSL 2100
            +DI  VVTRT+++EK++R  +HA+G GL++L++S  T+ R+     +++R +A +RNK+VH  D         F    RK F  +CD+ E  L
Sbjct:    2 SDIEKVVTRTRQIEKLLRVQYHASGKGLHQLITS--TEERLPHDVIKKLRYVATIRNKIVHEED---------FVLENRKEFLKVCDECEKEL 83
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: A0A329E9W9_VIBDI (Uncharacterized protein n=5 Tax=Vibrionaceae TaxID=641 RepID=A0A329E9W9_VIBDI)

HSP 1 Score: 57.0 bits (136), Expect = 4.010e-6
Identity = 32/101 (31.68%), Postives = 59/101 (58.42%), Query Frame = 1 
Query: 1822 NDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKVMCDDLELSLRECAAKVI 2124
            +DI  VV RT++LEK++R+ +HA G GL++L+SS   + R+      ++R +A +RNK+VH          + +    R+AF  +C++ E  L   +++ +
Sbjct:    2 SDIEQVVLRTRKLEKLLREQYHARGKGLHQLISSC--EERLPHDVIAKLRFVATIRNKVVHE---------DRYKLEDRRAFLAVCNECEKELTPRSSRFV 91
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: A0A2J8GPN2_VIBDI (DUF4145 domain-containing protein n=3 Tax=Vibrio TaxID=662 RepID=A0A2J8GPN2_VIBDI)

HSP 1 Score: 55.8 bits (133), Expect = 1.020e-5
Identity = 33/93 (35.48%), Postives = 54/93 (58.06%), Query Frame = 1 
Query: 1822 NDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKVMCDDLELSL 2100
            +DI  VV RT++LEK++R+ +HA G GL++L+SS   + R+      ++R IA +RNK+VH            +    R+AF  +C++ E  L
Sbjct:    2 SDIEQVVLRTRKLEKLLREQYHARGKGLHQLISSC--EERLPHDVIAKLRFIATIRNKVVHE---------ERYKLEDRRAFLSVCNECEKEL 83
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: A0A1V9Z4B3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z4B3_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.800e-5
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 1 
Query: 1822 NDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNL 2025
            ND  LV+T +K LE+++R+ +HA G+ L ELL+S+R  R + P   + I  + A+RNKLVH V    L
Sbjct:   38 NDYELVITCSKNLERVLREFYHAKGSCLGELLNSIR--RNLHPFQVKSIEYVIAIRNKLVHDVHTRTL 103
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: UPI000B3557E7 (DUF4145 domain-containing protein n=1 Tax=Thaumasiovibrio occultus TaxID=1891184 RepID=UPI000B3557E7)

HSP 1 Score: 55.1 bits (131), Expect = 1.890e-5
Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = 1 
Query: 1825 DIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKVMCDDLELSLRECAAKVI 2124
            +I  VVTRT+ LE ++RD +HA G GL++L++S   + R+       +R IA MRNK+VH          + +    RK FK  C   E  LR  + + I
Sbjct:    3 EIDWVVTRTRRLESLLRDHYHAEGKGLHQLVTSC--EERLPHELIPTLRYIATMRNKVVHE---------DGYKLDDRKGFKRACLRCEKELRPRSGRFI 91
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BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Match: A0A085SIX3_VIBCL (DUF4145 domain-containing protein n=52 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A085SIX3_VIBCL)

HSP 1 Score: 54.7 bits (130), Expect = 2.580e-5
Identity = 32/101 (31.68%), Postives = 57/101 (56.44%), Query Frame = 1 
Query: 1822 NDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDPRTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKVMCDDLELSLRECAAKVI 2124
            ++I  VV RT++LE ++R+ +HA G GL++L++S   + R+     +++R +A +RNK+VH  D         +    RKAF  +C + E  L   + K +
Sbjct:    2 SEIEQVVLRTRKLETLLREQYHAEGKGLHQLITSC--EERLPHDVIKKLRYVATIRNKVVHEDD---------YRLDDRKAFLAVCQECEDELTPRSGKFV 91
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig825.19600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5J997_9PHAE1.200e-27174.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG8_ECTSI2.000e-6287.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRG9_ECTSI7.330e-46100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9A8_9PHAE8.380e-4585.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2N8ZHG5_9VIBR5.080e-837.63Uncharacterized protein n=1 Tax=Vibrio tapetis sub... [more]
A0A329E9W9_VIBDI4.010e-631.68Uncharacterized protein n=5 Tax=Vibrionaceae TaxID... [more]
A0A2J8GPN2_VIBDI1.020e-535.48DUF4145 domain-containing protein n=3 Tax=Vibrio T... [more]
A0A1V9Z4B3_9STRA1.800e-544.12Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
UPI000B3557E71.890e-536.00DUF4145 domain-containing protein n=1 Tax=Thaumasi... [more]
A0A085SIX3_VIBCL2.580e-531.68DUF4145 domain-containing protein n=52 Tax=Gammapr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig825contigEcto-sp13_S_contig825:13779..19130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop0
Start1
Seed ortholog score60.1
Seed ortholog evalue5.9e-06
Seed eggNOG ortholog1051646.VITU9109_04272
Preferred nameVP2964
Model size2552
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs1QJRJ@1224,1THSU@1236,1XXF8@135623,2E6DG@1,33113@2
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-08_000880.1
Cds size2550
Best tax levelVibrionales
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464095.0623014-CDS-Ecto-sp13_S_contig825:13778..140121681464095.0623014-CDS-Ecto-sp13_S_contig825:13778..14012Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig825 13779..14012 -
1681464095.072964-CDS-Ecto-sp13_S_contig825:14657..149131681464095.072964-CDS-Ecto-sp13_S_contig825:14657..14913Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig825 14658..14913 -
1681464095.0816035-CDS-Ecto-sp13_S_contig825:16491..166571681464095.0816035-CDS-Ecto-sp13_S_contig825:16491..16657Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig825 16492..16657 -
1681464095.0904088-CDS-Ecto-sp13_S_contig825:17236..191301681464095.0904088-CDS-Ecto-sp13_S_contig825:17236..19130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig825 17237..19130 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig825.19600.1prot_Ecto-sp13_S_contig825.19600.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig825 13779..19130 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig825.19600.1

>prot_Ecto-sp13_S_contig825.19600.1 ID=prot_Ecto-sp13_S_contig825.19600.1|Name=mRNA_Ecto-sp13_S_contig825.19600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=850bp
MDHDTAAEHSAREARGAGSSSSPAEDHNDDGTSRPDQQALRESHDMNQAA
PAATVPPALPSHELPGTAVGTLPPQGSEVALQASTDSGGEAPTELKATSL
ESLILLSAEETGCDSGGSDGDRSQSEATTGSVSPAPAACFSSYATPAGGG
PPSPPASVAEAAAAKEAQSRMFHTGPPDGTAAVTLTASSTSSVTSFQQQE
GHHHPPAEPVNSLSLAASAAVLPGGPAAGAASAAAEEGEKNARIMSSPSA
AKLPSSSSTGATAERRDNSLPPSPPSEHEDQNHGQQEAAPAASAATTIKT
LEEGGDDTNIHADDAQQQHRPLQREGGVLIGGAQDDRPISDNPALTLSAS
SPSYESHHRLVQHTRRNVYEPHQPPAVLHPGGAATDLVAAAATTSTHLQF
HAGGLQQPAFGNYNAHAQPPPAAAAAYYGHHPPTQYSAGGPTPPPPPGTV
LGGAGLPYHSYQSGFVLPFTGRAPLLSAPPPGGGIDRYDLVPLGAAYDPH
HGHQRVCQPKHALHSRQQQFESGSPDALAPAEHPRPDATAGAPQTLTEGV
LTMPQSSSGGAASGGVRGGAPAPAPAPALGTAAGVMAAAAAAAGGRADGD
AVQNNAYNDIGLVVTRTKELEKIMRDSFHATGNGLNELLSSLRTDRRIDP
RTQQRIRSIAAMRNKLVHSVDANNLTMSNTFGASARKAFKVMCDDLELSL
RECAAKVIEEPFEQAARPADAFRLGNHPAFRGIGGGGGGGAGEDGDYDEA
AGMAEAEAAEVARREQEALIVKDNARFPHNLITAKRKNRRTEGSAAPPAP
DVNDEGAFPDINFASSAAVQQQSRRAARGEGAAGGGGGQVPPGPSQGGGR
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mRNA from alignment at Ecto-sp13_S_contig825:13779..19130-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig825.19600.1 ID=mRNA_Ecto-sp13_S_contig825.19600.1|Name=mRNA_Ecto-sp13_S_contig825.19600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5352bp|location=Sequence derived from alignment at Ecto-sp13_S_contig825:13779..19130- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATCACGACACTGCTGCAGAGCACAGCGCGAGAGAAGCAAGGGGCGC
GGGCAGCTCGAGTTCTCCGGCAGAAGACCACAACGACGACGGGACCTCCC
GCCCCGACCAGCAGGCGCTCCGGGAGAGTCATGACATGAACCAGGCAGCC
CCCGCCGCTACCGTGCCGCCTGCCCTACCTAGTCATGAGCTACCGGGCAC
TGCAGTGGGAACCCTGCCGCCGCAAGGCTCCGAGGTAGCGCTGCAGGCGT
CTACGGATAGCGGAGGCGAAGCACCCACCGAGCTCAAGGCGACCAGTCTC
GAGAGCTTGATTCTACTCAGCGCCGAGGAGACGGGGTGTGACTCGGGGGG
CAGCGATGGTGATCGTTCGCAGTCGGAGGCTACCACGGGTTCGGTAAGTC
CAGCACCGGCCGCGTGCTTCTCCTCCTACGCGACCCCCGCGGGAGGGGGA
CCTCCGTCCCCACCTGCATCGGTGGCGGAAGCAGCAGCAGCGAAGGAGGC
CCAGTCACGCATGTTTCACACCGGGCCTCCAGACGGGACAGCAGCAGTCA
CTCTCACCGCAAGCTCAACAAGCAGCGTGACGTCGTTCCAGCAGCAAGAG
GGGCATCATCACCCTCCTGCTGAACCAGTAAACTCGCTGTCGCTGGCGGC
TAGTGCCGCCGTGCTTCCCGGTGGGCCGGCGGCAGGCGCTGCTTCAGCAG
CAGCAGAGGAGGGCGAGAAAAATGCGAGGATAATGTCGAGTCCGTCAGCA
GCGAAGCTCCCCAGCAGCAGCAGCACCGGCGCCACCGCCGAGCGGCGTGA
CAACTCGCTACCGCCGTCTCCTCCCTCGGAGCACGAGGACCAAAACCATG
GGCAGCAGGAAGCGGCTCCCGCTGCTTCGGCAGCAACAACAATAAAAACA
CTAGAGGAAGGTGGTGATGACACGAATATACATGCTGATGATGCTCAACA
ACAACATCGACCGCTGCAGCGAGAGGGCGGAGTATTGATTGGGGGTGCCC
AAGATGACCGGCCAATATCCGACAATCCGGCGTTGACACTGTCGGCGTCG
TCGCCGTCGTACGAATCGCATCACCGTCTTGTGCAGCACACCAGACGGAA
TGTATACGAACCACATCAGCCGCCAGCGGTGCTCCACCCGGGGGGCGCCG
CGACCGACTTGGTAGCAGCCGCCGCTACGACATCAACGCACCTCCAATTC
CACGCCGGGGGGCTGCAGCAGCCGGCCTTCGGCAATTATAACGCCCACGC
GCAACCGCCGCCGGCTGCGGCAGCAGCGTATTACGGACACCACCCGCCTA
CACAATATTCTGCTGGAGGACCAACGCCACCGCCACCACCCGGCACGGTG
CTCGGCGGCGCTGGATTACCCTATCACTCGTATCAATCCGGATTTGTTTT
GCCCTTTACCGGAAGGGCGCCGTTGCTTTCAGCCCCACCCCCCGGGGGGG
GGATCGATAGATATGATTTGGTGCCTCTAGGAGCGGCCTACGACCCTCAT
CATGGACATCAGCGTGTTTGTCAACCCAAACATGCGTTGCATTCTCGGCA
GCAGCAGTTTGAATCAGGAAGTCCCGACGCCCTCGCTCCAGCAGAGCACC
CTCGCCCCGATGCCACCGCCGGTGCTCCCCAGACCCTGACGGAGGGCGTG
CTGACAATGCCCCAAAGCAGCAGCGGCGGTGCCGCAAGTGGGGGTGTACG
AGGAGGAGCGCCGGCGCCGGCGCCGGCGCCGGCGCTAGGGACGGCCGCGG
GCGTCATGGCGGCGGCGGCGGCGGCGGCGGGCGGGCGGGCGGACGGGGAC
GCGGTTCAGAACAACGCGTACAATGACATCGGGCTGGTCGTGACGCGCAC
CAAGGAGCTCGAGAAAATCATGAGGGACTCGTTCCACGCAACTGGTGAGA
AGAGAAAGTACTGTAGAAGGAGCGTTGGTGGCTACAAACACCAGGCAGCG
AAGTATTGCATGTCTTGAAAGTATACACACGCTCACAGAAAATGTCATGG
CCCATTCGAAGGAGTGTGTTGAACTCGTTGCAGCCCCTGAGTGTTGAGAA
AAACGTGCTGGGTGCTGCGCTTGTTTGGGTCTGTTGAAGCCTGTGTTTAT
GCACGTCTCCCTCTCCTCGTGAGTTGTGCGGTGAGCGGGCTAGCCCGCGC
GACGCTGGTGCTTGTCTTGTGCTCCTTTGGCGTTGTGGCAAGACGCCGCG
AGTAGTAGTCTCCCTTTTTCGTCTGCTGTGCTGCGTCTCCTCCTCTGTCT
GGACACAACCGGTGTTGTTTTTGTTGCTGTGCTGTTACAGATGCTCTTGC
TGCTGCCGCCTCGTCGCGTGTGAGCTTTCCACCGAACATTCCGCTTACAG
CTTCGCGCAAATTCGGGCTTGATGGGTTGTGGTCCTTTCCGGCCCTACCC
TAACCCTTCACACGCGCCTACGCCTTACGCTACCGGCCGACGTTGTGTTT
GTGTTTCTTTCTTACTTTCCCAGGGAACGGGCTGAACGAGCTGCTATCTT
CTTTGAGAACGGACCGCAGGATCGACCCTCGCACGCAGCAGCGCATCCGC
TCCATCGCCGCCATGCGTAACAAGCTCGTCCACAGTGTGGACGCCAACAA
TTTGACGATGTCAAACACGTTCGGAGCCTCGGCTCGCAAGTGAGGGCACC
GCGATTGTTTTGTATTTCCGTTGTGATCGAATCGACGCCAGTTGTTGTTG
TCTTCACACTATTGAACGCCTTTCCAATCTCTCCATCCAGTACCTTCATC
TCTCCAGACTGATCTGACACTTGACGCGGTCGATTCCTGTGGTCACAAAC
AAACTTACCCTGAAAAAGGTACACTCAATTATTATGGGCCCGCCAATGAT
GAGTGCTGTGCTGTGCGTACAGCTGCTGTGTGTGTTCTGCGTGCGTGCTG
ATTCACCACGTGATAAATGCAAAAATTAGCTTGATTCAGTGTACTGCTCT
TGTTTTGGTTTGGGAAAAGACGCATGTGTACGTCGATTTTCATAAAACGT
TTTTGGTATGGTTTGGGATGCGTCACACAGCAGACGGCCACACGGGCGGC
CATGGTTGTTTTTTTGTCGCATATCACGCCTACAAAGCGCCCTGGACATG
CCCTAGAGAATCTCGCCGGCTAGGAGATGTCTGGGTCCCGCTGCTGCGTT
TGTCAGTATTCGCGGCGATTTTGAGAGCTCCGCGCATGAATTCTTTCAAA
GCTCACCGCAAGTTGACTACCCGGTCTCGTTTGATTGGTGACACGTGAGC
TCACACACCCATTGCTGTAGCACCGCAGGAGAGTTGCATTGGAGTCAAAT
GACGGTGCTTTGTGGGTGGGACGATAGACCGTCTCTCGCGGGCCGGTGGC
GCTGCAGGGGCGGGAGCCGCCGCGGATGCAGCCACTCCGTGCAAGATCTC
GAGCGGCAACGGCTTCCGATGCAAAAAGCGCGGCGATTTTGGATCGTATA
CGACCTTCTGAGTGGCCCGCGAGAGAGGATCATGGTGCCAGCGACAAACC
ACCTTCATTTGACTTTCATGCAACTCTCCTGCGGTGCTGCAGTAGTGGGT
GGGCGACCTCACGTGTTACCAATCAATCGAGACCGGGCAGCGGACCTGCG
ACGTATTCATTTTTTGTCTTCACTTCAAACCAGCGCTCACAACACTTGCG
GCGTTTACGGCAGCGTGCTTTGAATTAACTCTTGGGCGGACTCCCCCAAT
GTCGCCGCGAATATGTATGAGCACTTGGACAAACGCAACAGCGGTACCCA
GACCTCTCCTTGGCGATGAGATTCTTGTGCTATCATTGAGCAATGTCAAG
GGTGCTTGGTAGGAAAATATCCTCTGGCACTACATAGACTACTGCTCCAG
CGTTGGCGTTGCTCCCGAGGGATGGCACGGTCTCCGCAGTAGCTGCTAAA
CTAGCGTCTTCAAGTCTTGGTCTTCCCCGATTCGTGTTGGTTTTGGACTG
CCCAGAACCGCGTGTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAC
ACCCTCCCAACCCCCCCNNNNNNNNNNAAAACATCCGTTTTTAAGTTTTT
GTCTTCCCCCATTTTTTTTTTTTTTGTCCCCCCCACAACCGCGGTTCCCC
CCCCCCCCCCCCCCCCCCCCCCGTGAGACGATTTCAGAAAATTGCGGCAT
CATTGTTTATGACCAGGTGACGAGCTCATACGCACCCCCCTCCCTTAAAC
ATCGGCCCCAACTACAGAGCCTTCAAGGTGATGTGCGACGATTTGGAGCT
TAGCCTGCGAGAGTGTGCCGCCAAGGTGATCGAAGAGCCCTTTGAGCAGG
CGGCCCGTCCCGCCGACGCCTTCCGGCTGGGCAATCACCCGGCCTTTCGC
GGGATAGGTGGCGGCGGCGGCGGCGGGGCCGGGGAAGACGGGGACTACGA
CGAGGCAGCGGGGATGGCGGAGGCCGAGGCTGCGGAGGTCGCCCGGCGAG
AGCAAGAAGCGCTCATCGTCAAGGTGTGCAATATGTTTTCGGCGTTGTAC
GTATTCACCAACTCAGTTACCCACACCCTCTAGTTCGGATTCGCGTACCG
GAGCGTGTGCATGAAATTGTCGGTAGAGAGTATCTGCTGTACTATCCATT
TTCCGTTTCGAAGGAGTTTGGTGGTCACCTGCTGTTGACCGACGAAGGCA
AGCGACACGAACAAGTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCAACCCCCCACCCCCCCACCCCCCCCCCCCCCA
CACCACCCACCCACCCTCTCACACCCNNNNNNNNNNTTTTTTCCATTTTT
CCTTTTGGAGGAGTTTGGTCGACCCCTGTGTGTGCACAACGGGAGGAACG
CCCCTAAAAAAGTCCCCCCCCCCCCCCCCCCCCCTCTCCCTTCGATCAAC
CATCTCAATTCACCCATCCGCGTGGCCCCAAAACTCATCAACCACAATCC
GAATGCCTTTCTTACTCCTTTGCAATAATATATAGTACTCTTGTTTTTTT
CCTCTGGCCGCCATTCAATGTGTACATGACGCCGTCATTTGCCACGTAAG
GACAAAGCGCGGTTCCCCCACGACCTTCTTTTTTTCCCCTCTCGTCATGT
ATGACGCCGACATGCCAGGACAACGCACGGTTCCCGCACAACCTCATCAC
GGCCAAGCGGAAGAACCGGCGCACCGAGGGTTCCGCCGCGCCCCCCGCTC
CCGACGTAAACGACGAGGGCGCCTTCCCGGACATCAACTTCGCCTCTAGC
GCCGCCGTGCAGCAGCAGTCCAGGCGGGCGGCCAGGGGGGAGGGCGCAGC
TGGGGGTGGGGGGGGTCAGGTACCACCGGGCCCTTCCCAAGGAGGCGGGC
GG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig825:13779..19130-

>mRNA_Ecto-sp13_S_contig825.19600.1 ID=mRNA_Ecto-sp13_S_contig825.19600.1|Name=mRNA_Ecto-sp13_S_contig825.19600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2550bp|location=Sequence derived from alignment at Ecto-sp13_S_contig825:13779..19130- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATCACGACACTGCTGCAGAGCACAGCGCGAGAGAAGCAAGGGGCGC
GGGCAGCTCGAGTTCTCCGGCAGAAGACCACAACGACGACGGGACCTCCC
GCCCCGACCAGCAGGCGCTCCGGGAGAGTCATGACATGAACCAGGCAGCC
CCCGCCGCTACCGTGCCGCCTGCCCTACCTAGTCATGAGCTACCGGGCAC
TGCAGTGGGAACCCTGCCGCCGCAAGGCTCCGAGGTAGCGCTGCAGGCGT
CTACGGATAGCGGAGGCGAAGCACCCACCGAGCTCAAGGCGACCAGTCTC
GAGAGCTTGATTCTACTCAGCGCCGAGGAGACGGGGTGTGACTCGGGGGG
CAGCGATGGTGATCGTTCGCAGTCGGAGGCTACCACGGGTTCGGTAAGTC
CAGCACCGGCCGCGTGCTTCTCCTCCTACGCGACCCCCGCGGGAGGGGGA
CCTCCGTCCCCACCTGCATCGGTGGCGGAAGCAGCAGCAGCGAAGGAGGC
CCAGTCACGCATGTTTCACACCGGGCCTCCAGACGGGACAGCAGCAGTCA
CTCTCACCGCAAGCTCAACAAGCAGCGTGACGTCGTTCCAGCAGCAAGAG
GGGCATCATCACCCTCCTGCTGAACCAGTAAACTCGCTGTCGCTGGCGGC
TAGTGCCGCCGTGCTTCCCGGTGGGCCGGCGGCAGGCGCTGCTTCAGCAG
CAGCAGAGGAGGGCGAGAAAAATGCGAGGATAATGTCGAGTCCGTCAGCA
GCGAAGCTCCCCAGCAGCAGCAGCACCGGCGCCACCGCCGAGCGGCGTGA
CAACTCGCTACCGCCGTCTCCTCCCTCGGAGCACGAGGACCAAAACCATG
GGCAGCAGGAAGCGGCTCCCGCTGCTTCGGCAGCAACAACAATAAAAACA
CTAGAGGAAGGTGGTGATGACACGAATATACATGCTGATGATGCTCAACA
ACAACATCGACCGCTGCAGCGAGAGGGCGGAGTATTGATTGGGGGTGCCC
AAGATGACCGGCCAATATCCGACAATCCGGCGTTGACACTGTCGGCGTCG
TCGCCGTCGTACGAATCGCATCACCGTCTTGTGCAGCACACCAGACGGAA
TGTATACGAACCACATCAGCCGCCAGCGGTGCTCCACCCGGGGGGCGCCG
CGACCGACTTGGTAGCAGCCGCCGCTACGACATCAACGCACCTCCAATTC
CACGCCGGGGGGCTGCAGCAGCCGGCCTTCGGCAATTATAACGCCCACGC
GCAACCGCCGCCGGCTGCGGCAGCAGCGTATTACGGACACCACCCGCCTA
CACAATATTCTGCTGGAGGACCAACGCCACCGCCACCACCCGGCACGGTG
CTCGGCGGCGCTGGATTACCCTATCACTCGTATCAATCCGGATTTGTTTT
GCCCTTTACCGGAAGGGCGCCGTTGCTTTCAGCCCCACCCCCCGGGGGGG
GGATCGATAGATATGATTTGGTGCCTCTAGGAGCGGCCTACGACCCTCAT
CATGGACATCAGCGTGTTTGTCAACCCAAACATGCGTTGCATTCTCGGCA
GCAGCAGTTTGAATCAGGAAGTCCCGACGCCCTCGCTCCAGCAGAGCACC
CTCGCCCCGATGCCACCGCCGGTGCTCCCCAGACCCTGACGGAGGGCGTG
CTGACAATGCCCCAAAGCAGCAGCGGCGGTGCCGCAAGTGGGGGTGTACG
AGGAGGAGCGCCGGCGCCGGCGCCGGCGCCGGCGCTAGGGACGGCCGCGG
GCGTCATGGCGGCGGCGGCGGCGGCGGCGGGCGGGCGGGCGGACGGGGAC
GCGGTTCAGAACAACGCGTACAATGACATCGGGCTGGTCGTGACGCGCAC
CAAGGAGCTCGAGAAAATCATGAGGGACTCGTTCCACGCAACTGGGAACG
GGCTGAACGAGCTGCTATCTTCTTTGAGAACGGACCGCAGGATCGACCCT
CGCACGCAGCAGCGCATCCGCTCCATCGCCGCCATGCGTAACAAGCTCGT
CCACAGTGTGGACGCCAACAATTTGACGATGTCAAACACGTTCGGAGCCT
CGGCTCGCAAAGCCTTCAAGGTGATGTGCGACGATTTGGAGCTTAGCCTG
CGAGAGTGTGCCGCCAAGGTGATCGAAGAGCCCTTTGAGCAGGCGGCCCG
TCCCGCCGACGCCTTCCGGCTGGGCAATCACCCGGCCTTTCGCGGGATAG
GTGGCGGCGGCGGCGGCGGGGCCGGGGAAGACGGGGACTACGACGAGGCA
GCGGGGATGGCGGAGGCCGAGGCTGCGGAGGTCGCCCGGCGAGAGCAAGA
AGCGCTCATCGTCAAGGACAACGCACGGTTCCCGCACAACCTCATCACGG
CCAAGCGGAAGAACCGGCGCACCGAGGGTTCCGCCGCGCCCCCCGCTCCC
GACGTAAACGACGAGGGCGCCTTCCCGGACATCAACTTCGCCTCTAGCGC
CGCCGTGCAGCAGCAGTCCAGGCGGGCGGCCAGGGGGGAGGGCGCAGCTG
GGGGTGGGGGGGGTCAGGTACCACCGGGCCCTTCCCAAGGAGGCGGGCGG
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