prot_Ecto-sp13_S_contig8249.19598.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8249.19598.1
Unique Nameprot_Ecto-sp13_S_contig8249.19598.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length585
Homology
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: D7FWI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWI2_ECTSI)

HSP 1 Score: 664 bits (1713), Expect = 7.790e-233
Identity = 486/563 (86.32%), Postives = 495/563 (87.92%), Query Frame = 0
Query:    1 MAKTTRRDRHKKAIVSGAAQARGVSKVMEKERTVSTSSSGGSNHKRPAAAGLVGKGGKELAKRPAAREQRGGRNDSQSASTGRDADGRKXXXXXXXXXXXXXXXXXEGGRQSVEDELVATIQEHDEFFSRMLDMIPEHLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKAVEDGGDADAGSNKDNDDXXDESDGGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXXRKGAKXXXXXXXXXXXXXXXXXXXXXXXKGSAEAXXXXXXXXXXXAKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSKAGERGGGGGRGGARGGRGRGG 563
            M K+TRRDR KKAI SGAAQARGVSKVM KERT STS              LVGKGGKEL K                           XXXXXXXXXXXXXXXXX GGR+SVEDELVATIQEHDEFFSRMLDMIPE+LVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKA EDGGDADAGS+KD   XX    GGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXX  SAEAXXXXXXXXXX AKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGV+GDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTE GKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWD+RLSGQR XXXXXXXXXEENLNRRKKGGPAVG+TDKAA+GGDAASGQ  KRQRRAGFEGKKQDFINKERPSKAGE+GGGGGRGGARGGRGRGG
Sbjct:    1 MTKSTRRDRRKKAIASGAAQARGVSKVMTKERTASTSXXXXXXXXXXXXXXLVGKGGKELVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRESVEDELVATIQEHDEFFSRMLDMIPENLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKAGEDGGDADAGSDKDXXXXXXXXXGGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEAXXXXXXXXXXGAKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGVLGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTETGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDERLSGQRKXXXXXXXXXEENLNRRKKGGPAVGETDKAASGGDAASGQGGKRQRRAGFEGKKQDFINKERPSKAGEQGGGGGRGGARGGRGRGG 563          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A1E7FHH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.240e-15
Identity = 70/186 (37.63%), Postives = 95/186 (51.08%), Query Frame = 0
Query:  362 DVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--EEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAA--------GGDAASGQDAKRQRRAGFEGKKQDFINK 537
            D+  ++F  L G+   G+GN  +  + K     SK K L  LLA AE KKQRL  L+++   E KEKA    W + I+ A G  +KD+PA +KK+++RK  +K KSA  W  R+   +            NLN+RK GG    +              GG      D +R  RAGFEGKKQDF+NK
Sbjct:  226 DLSQVDFGRLAGLNPIGNGNYTE--VNKALKNLSKSKNLEKLLADAESKKQRLEELKKSGKAEDKEKADNIVWGNVIKEATGERVKDDPAKIKKVLQRKAAKKKKSAKAWKNRMDTTKQNMDERQNIRNHNLNQRKAGGQTGANLSSKRIELEGDDKNGGPTKQKNDGRRLSRAGFEGKKQDFLNK 409          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A448ZTA8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTA8_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.040e-15
Identity = 70/186 (37.63%), Postives = 98/186 (52.69%), Query Frame = 0
Query:  362 DVGDIEFSGLRGV--VGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTE--EGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTD------KAAAGGDAASGQDAKRQRRAGFEGKKQDFINK 537
            D+  ++F  L G+  VG+G+       L  +    SK K L  +LA AE KK+RL  L+Q++  E KEKA    W D +R A G  +KD+PA +KK +KR+  +K KS+  W  R+   +            NL +RK GG A  +        +A A G   +G+   R  RAGFEGKKQDF+NK
Sbjct:  172 DLAMVDFGRLSGLNPVGNGNYTEVNKALKNL----SKSKNLEKMLADAESKKKRLEELKQSDKQEDKEKAASIEWGDTLREATGERVKDDPAKIKKALKRRAAKKLKSSKAWKTRMESAQSKMDERQKIRNHNLTKRKLGGSAGANLSSKRIETEAEADGKKKTGR---RLSRAGFEGKKQDFLNK 350          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A1Z5JT82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT82_FISSO)

HSP 1 Score: 85.9 bits (211), Expect = 2.170e-14
Identity = 76/191 (39.79%), Postives = 102/191 (53.40%), Query Frame = 0
Query:  361 EDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPG--SKMKRLHGLLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVG---DTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSKAGE 545
            ED+  ++F  L G+    + N     L    A G  SK K L  +LA AE K+Q+L  L++ TEE K KA E  W+D ++ A G  +K +P+ +KK++KRK  +KAKS   W  RL   +            NL+ RKKGG A+G      K    GD  SG   KR  RAGFEGKK+DF+N   P K G+
Sbjct:  191 EDLAKLDFGRLAGLNTTETSNY----LAANKALGNLSKTKNLKKMLADAEAKQQKLEQLKKGTEEEKAKAMEMQWSDTLKEADGQRVKSDPSKIKKVLKRKAAKKAKSQKAWKTRLEQVKEKKDERQTIRNHNLDARKKGG-AIGANLSKKKIVKDGDQDSG---KRLSRAGFEGKKRDFLNS--PKKKGQ 371          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S4ATI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATI7_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.200e-13
Identity = 67/186 (36.02%), Postives = 97/186 (52.15%), Query Frame = 0
Query:  362 DVGDIEFSGLRGV--VGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTEE--GKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAA-----GGDAASGQDAKRQRRAGFEGKKQDFINKE 538
            D+  ++F  L G+  VG+G+       L  +    SK K L  +LA AE KK+RL  L+++++   KEKA    W  A++ A G  +KD+PA +KK +KRK  +K KS+  W  R+   +            NL++RK GG A  +           G D   G   +R  RAGFEGKKQDF+NK+
Sbjct:  264 DLAQVDFGRLAGLNPVGNGNYTEVNKALKNL----SKSKNLEKMLADAESKKKRLEELKKSDKQTDKEKAANIEWGHALKEATGERVKDDPAKIKKALKRKAAKKLKSSKAWKTRIESTQSKMDERQKIRNHNLSKRKVGGSAGANLSSKRIEVEKEGDDKKKG--GRRLSRAGFEGKKQDFLNKK 443          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S4UJP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UJP3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.600e-13
Identity = 73/200 (36.50%), Postives = 99/200 (49.50%), Query Frame = 0
Query:  356 PLPTVEDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPA---------VGDTDKAAAGGDAASGQDAKRQRR---------AGFEGKKQDFIN 536
            P    +D+  I+F G+ G+         K  L  V    +K K L  LL  AE+K+QRL  L+Q  EE K KA +  W  A++ A G +++++PA +KK +KRK K+K KSA  W  R    R            N+N+RK+GG A         V D DK          +D K++RR         AGFEGKKQDFIN
Sbjct:  245 PATVKDDMDGIDFGGISGLATKKHYEDNKS-LSNV----NKKKSLERLLEEAEKKQQRLKALKQGDEEDKAKAAKIEWGIALKEASGEKVRNDPAMIKKAMKRKAKKKVKSAEAWKARTDQLRDKIDERQKIRTHNINQRKQGGMAGANLSKKRIVEDEDKKT--------EDGKKKRRLGPHAEKSRAGFEGKKQDFIN 431          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: B5Y420_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y420_PHATC)

HSP 1 Score: 80.9 bits (198), Expect = 1.290e-12
Identity = 65/185 (35.14%), Postives = 98/185 (52.97%), Query Frame = 0
Query:  362 DVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLR--QTEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDA-KRQRRAGFEGKKQDFINKERPSKA 543
            D+ +++F  L G+      +  K    K  A  SK K L  +LA AE K++R+  L+  + E  + +A++  W D ++ A G  +KD+P  LKK +KRKE +KAKS   W  R+              + NL+ RK GG +  +  K      A +G+D  +R  RAGFEG+KQDF+NK   +KA
Sbjct:  218 DLANLDFGRLAGLNSHTKEHYSKSN--KALANLSKTKNLERMLADAEAKRERIEALKACKDESAQAEARQILWKDTLQEADGQRVKDDPMKLKKALKRKEVKKAKSKKAWKSRMENVSDAAQSRQKIRQHNLSARKAGGQSGANLSKKKI---ADAGEDGGRRLSRAGFEGRKQDFLNKGPAAKA 397          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: K8YSR8_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR8_NANGC)

HSP 1 Score: 80.1 bits (196), Expect = 3.490e-12
Identity = 62/143 (43.36%), Postives = 76/143 (53.15%), Query Frame = 0
Query:  398 KRLHGLLAAAEEKKQRLAGLRQTEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDAK---RQRRAGFEGKKQDFINK 537
            K L GLL  AEEK++RL  L+ TE GKE+A    W DA++ A G +I DNP  LKK IK+KEK    S  KW  R +             E NL +RK GG      +   AG  A      K   RQ RAGFEGK+ +F+NK
Sbjct:  328 KNLVGLLKKAEEKEKRLKELQATEGGKEEASALLWKDALKSAHGEKILDNPKLLKKAIKKKEKAXXXSKEKWGDRTAKIEAAEREKQGRREANLKKRKLGG-----VEGCLAGSKAEKDNKEKSGGRQGRAGFEGKRAEFLNK 465          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S3KW68_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW68_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.620e-12
Identity = 64/182 (35.16%), Postives = 94/182 (51.65%), Query Frame = 0
Query:  362 DVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSK 542
            D+  ++F  L G+ G  S  +      K     SK K LH +LA AE K+ +L  L+Q  EE   KA++  W+D  + A G  IKD+P+ LKK++KRK  +K KS   W  R +             + NL  RK+GG A  +  K     D   G+   R  RAGFEG+K++F+N ++ +K
Sbjct:  192 DLAQVDFGRLAGLNGS-SLQKNYEQSNKALQNLSKSKNLHKMLADAEAKRAKLEELKQGDEEAVAKAQKLLWSDTFKEADGQRIKDDPSKLKKVLKRKAAKKVKSQKAWQSRTAQVDKKAQDRQKIRQHNLQARKQGGAAGANLSKKEIRKDEDPGR---RLSRAGFEGRKREFLNGDKKTK 369          
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S2VZU1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZU1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.420e-11
Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 0
Query:  403 LLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGD--TDKAAAGGDA---ASGQDAKRQR--------RAGFEGKKQDFIN 536
            LLA A++KK RL  L+  T+E KEKAK   W D ++ A G +   +P+ LKK IKR+ K+K KS   W  R+   +            N+++RK GG A+G   ++K     +A   A+G   KR R        RAGFEGKKQ+FIN
Sbjct:    3 LLALAQKKKDRLKELKAGTDEDKEKAKRIDWGDTLKAATGEKTNSDPSLLKKAIKRRAKQKTKSGEAWKVRIDSVKDKMDERQKIRSHNIDKRKLGG-AIGANLSNKRIEESEAEKEAAGDGKKRARLGPHSTKGRAGFEGKKQEFIN 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FWI2_ECTSI7.790e-23386.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E7FHH0_9STRA1.240e-1537.63Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448ZTA8_9STRA4.040e-1537.63Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5JT82_FISSO2.170e-1439.79Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4ATI7_9STRA1.200e-1336.02Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4UJP3_9STRA1.600e-1336.50Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
B5Y420_PHATC1.290e-1235.14Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
K8YSR8_NANGC3.490e-1243.36Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3KW68_9STRA5.620e-1235.16Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2VZU1_9STRA1.420e-1139.86Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029190Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainPFAMPF04935SURF6coord: 276..496
e-value: 5.4E-28
score: 98.2
IPR029188Ribosomal RNA-processing protein 14, N-terminalPFAMPF15459RRP14coord: 121..180
e-value: 2.2E-14
score: 53.8
IPR007019Surfeit locus 6PANTHERPTHR14369SURFEIT LOCUS PROTEIN 6coord: 120..537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8249contigEcto-sp13_S_contig8249:1308..6080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8249.19598.1mRNA_Ecto-sp13_S_contig8249.19598.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8249 1308..6080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8249.19598.1 ID=prot_Ecto-sp13_S_contig8249.19598.1|Name=mRNA_Ecto-sp13_S_contig8249.19598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp
MAKTTRRDRHKKAIVSGAAQARGVSKVMEKERTVSTSSSGGSNHKRPAAA
GLVGKGGKELAKRPAAREQRGGRNDSQSASTGRDADGRKKKRPRSQVEED
EEEEREEGGRQSVEDELVATIQEHDEFFSRMLDMIPEHLVLRAKEVAESS
YASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKAVE
DGGDADAGSNKDNDDDGDESDGGLQAAAEQDGLQSEVLRGKSMDVASMDA
LKKRIEERIKVFQEKRTAAEGSRRAKTAAKRSAKTATKRENKRKGAKARK
KGREGAIAAVAATGGAAGGAKGSAEAANGAGEGKAKGAKVEANGSHAPVA
KPQLPPLPTVEDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRL
HGLLAAAEEKKQRLAGLRQTEEGKEKAKEEGWADAIRVAGGAEIKDNPAA
LKKMIKRKEKEKAKSAAKWDKRLSGQRKEQAKRQDKREENLNRRKKGGPA
VGDTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSKAGERGGGG
GRGGARGGRGRGGGGRDGGRGRGGGRGGGGRGRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029190Rrp14/SURF6_C
IPR029188Rrp14_N
IPR007019SURF6