prot_Ecto-sp13_S_contig8240.19594.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8240.19594.1
Unique Nameprot_Ecto-sp13_S_contig8240.19594.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8240.19594.1 vs. uniprot
Match: A0A6H5JX55_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX55_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 8.490e-24
Identity = 44/49 (89.80%), Postives = 47/49 (95.92%), Query Frame = 0 
Query:    1 MSYPTKKPHGRSSGWSQPRADLQPRPSARLNTNDREGVWLEPVATDQGS 49
            MSYPTKKPHGRSSGWSQPRADLQP PS R+NTNDR+GVWLEPVAT+QGS
Sbjct:    1 MSYPTKKPHGRSSGWSQPRADLQPHPSVRMNTNDRKGVWLEPVATEQGS 49
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BLAST of mRNA_Ecto-sp13_S_contig8240.19594.1 vs. uniprot
Match: D7G375_ECTSI (Glutaredoxin glutaredoxin/malate transporter fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G375_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.820e-20
Identity = 70/75 (93.33%), Postives = 70/75 (93.33%), Query Frame = 0 
Query:    1 MSYPTKKPHGRSSGWSQPRADLQPRPSARLNTNDR-EGVWLEPVATDQGSXXXXXXXXXXXXXXXXXXXXSASAE 74
            MSYPTKKPHGRSSGWSQPRADLQPRPS RLNTN   E VWLEPVATDQGSXXXXXXXXXXXXXXXXXXXXSASAE
Sbjct:    1 MSYPTKKPHGRSSGWSQPRADLQPRPSVRLNTNGTAEDVWLEPVATDQGSXXXXXXXXXXXXXXXXXXXXSASAE 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8240.19594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JX55_9PHAE8.490e-2489.80Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
D7G375_ECTSI1.820e-2093.33Glutaredoxin glutaredoxin/malate transporter fusio... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8240contigEcto-sp13_S_contig8240:5616..5858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8240.19594.1mRNA_Ecto-sp13_S_contig8240.19594.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8240 3390..5858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8240.19594.1 ID=prot_Ecto-sp13_S_contig8240.19594.1|Name=mRNA_Ecto-sp13_S_contig8240.19594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MSYPTKKPHGRSSGWSQPRADLQPRPSARLNTNDREGVWLEPVATDQGST
DRSSTDRSSTDQGSSEQVSSASAEVRNQLL*
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