mRNA_Ecto-sp13_S_contig82343.19592.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig82343.19592.1
Unique NamemRNA_Ecto-sp13_S_contig82343.19592.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: D8LQB3_ECTSI (Inositol-3-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQB3_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 6.600e-33
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVV +
Sbjct:  321 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVVI 384
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: H6S3Y6_PLAVT (Inositol-3-phosphate synthase (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S3Y6_PLAVT)

HSP 1 Score: 118 bits (295), Expect = 5.420e-32
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVV +
Sbjct:    3 VSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVI 66
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: A0A662X127_9STRA (Inositol-3-phosphate synthase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X127_9STRA)

HSP 1 Score: 120 bits (301), Expect = 9.010e-32
Identity = 58/64 (90.62%), Postives = 62/64 (96.88%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKEGEHPDHVV +
Sbjct:  114 VSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKEGEHPDHVVVI 177
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: K3WKY7_GLOUD (Inositol-3-phosphate synthase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WKY7_GLOUD)

HSP 1 Score: 119 bits (299), Expect = 2.820e-30
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKP SIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN+MLYKEGEHPDHVV +
Sbjct:  321 VSAGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRMLYKEGEHPDHVVVI 384
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: A0A812VXU1_SYMMI (Inositol-3-phosphate synthase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VXU1_SYMMI)

HSP 1 Score: 115 bits (288), Expect = 4.010e-30
Identity = 55/64 (85.94%), Postives = 60/64 (93.75%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKP SIVSYNHLGNNDG+NLSAP+QFRSKEISKSNVVDDMVDSN++LY  GEHPDHVV +
Sbjct:   68 VSAGIKPRSIVSYNHLGNNDGKNLSAPEQFRSKEISKSNVVDDMVDSNRLLYAPGEHPDHVVVI 131
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: A0A2P4Y6M5_9STRA (Inositol-3-phosphate synthase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y6M5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.210e-30
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVV +
Sbjct:  227 VSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVI 290
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: G8GIC2_AEDAL (Inositol-3-phosphate synthase (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=G8GIC2_AEDAL)

HSP 1 Score: 110 bits (275), Expect = 6.310e-30
Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKP SIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN +LYK  EHPDH V +
Sbjct:   20 VSAGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNNILYKPDEHPDHCVVI 83
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: A0A2D4BJU5_PYTIN (Inositol-3-phosphate synthase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BJU5_PYTIN)

HSP 1 Score: 118 bits (295), Expect = 1.030e-29
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKP SIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKEGEHPDHVV +
Sbjct:  320 VSAGIKPVSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNQLLYKEGEHPDHVVVI 383
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: H3G8E9_PHYRM (Inositol-3-phosphate synthase n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G8E9_PHYRM)

HSP 1 Score: 118 bits (295), Expect = 1.030e-29
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVV +
Sbjct:  321 VSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVI 384
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BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Match: M4BD01_HYAAE (Inositol-3-phosphate synthase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BD01_HYAAE)

HSP 1 Score: 118 bits (295), Expect = 1.030e-29
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 1 
Query:    1 VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKMLYKEGEHPDHVVSV 192
            VSAGIKPTSIVSYNHLGNNDG+NLSAPQQFRSKEISKSNVVDDMV SN++LYKE EHPDHVV +
Sbjct:  321 VSAGIKPTSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDMVASNRLLYKENEHPDHVVVI 384
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig82343.19592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQB3_ECTSI6.600e-3396.88Inositol-3-phosphate synthase n=2 Tax=Ectocarpus T... [more]
H6S3Y6_PLAVT5.420e-3289.06Inositol-3-phosphate synthase (Fragment) n=1 Tax=P... [more]
A0A662X127_9STRA9.010e-3290.63Inositol-3-phosphate synthase (Fragment) n=2 Tax=N... [more]
K3WKY7_GLOUD2.820e-3090.63Inositol-3-phosphate synthase n=2 Tax=Pythiaceae T... [more]
A0A812VXU1_SYMMI4.010e-3085.94Inositol-3-phosphate synthase (Fragment) n=1 Tax=S... [more]
A0A2P4Y6M5_9STRA4.210e-3089.06Inositol-3-phosphate synthase (Fragment) n=1 Tax=P... [more]
G8GIC2_AEDAL6.310e-3084.38Inositol-3-phosphate synthase (Fragment) n=1 Tax=A... [more]
A0A2D4BJU5_PYTIN1.030e-2989.06Inositol-3-phosphate synthase n=2 Tax=Pythium TaxI... [more]
H3G8E9_PHYRM1.030e-2989.06Inositol-3-phosphate synthase n=23 Tax=Peronospora... [more]
M4BD01_HYAAE1.030e-2989.06Inositol-3-phosphate synthase n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig82343contigEcto-sp13_S_contig82343:3..194 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score120.6
Seed ortholog evalue2.8e-25
Seed eggNOG ortholog36331.EPrPI00000015966
Preferred nameISYNA1
Model size192
KEGG rclassRC01804
KEGG koko:K01858
KEGG ReactionR07324
KEGG Pathwayko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004512,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006020,GO:0006021,GO:0006066,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016853,GO:0016872,GO:0019637,GO:0019751,GO:0034637,GO:0043647,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046173,GO:0071704,GO:1901576,GO:1901615,GO:1901617
Exons1
EggNOG free text desc.Myo-inositol-1-phosphate synthase
EggNOG OGs1MET9@121069,COG1260@1,KOG0693@2759
EC5.5.1.4
Cds size192
COG Functional cat.I
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464094.406111-CDS-Ecto-sp13_S_contig82343:2..1941681464094.406111-CDS-Ecto-sp13_S_contig82343:2..194Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig82343 3..194 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig82343.19592.1prot_Ecto-sp13_S_contig82343.19592.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig82343 3..194 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig82343.19592.1

>prot_Ecto-sp13_S_contig82343.19592.1 ID=prot_Ecto-sp13_S_contig82343.19592.1|Name=mRNA_Ecto-sp13_S_contig82343.19592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
VSAGIKPTSIVSYNHLGNNDGRNLSAPQQFRSKEISKSNVVDDMVDSNKM
LYKEGEHPDHVVSV
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mRNA from alignment at Ecto-sp13_S_contig82343:3..194-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig82343.19592.1 ID=mRNA_Ecto-sp13_S_contig82343.19592.1|Name=mRNA_Ecto-sp13_S_contig82343.19592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig82343:3..194- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGAGCGCCGGGATCAAGCCGACGTCGATCGTGTCGTACAATCACCTCGG
GAACAACGACGGCAGGAACCTCTCGGCGCCGCAGCAGTTCCGTTCGAAGG
AGATCAGCAAGTCTAACGTCGTGGACGACATGGTGGACTCGAACAAGATG
CTCTACAAGGAGGGCGAGCACCCTGACCACGTCGTGAGTGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig82343:3..194-

>mRNA_Ecto-sp13_S_contig82343.19592.1 ID=mRNA_Ecto-sp13_S_contig82343.19592.1|Name=mRNA_Ecto-sp13_S_contig82343.19592.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=192bp|location=Sequence derived from alignment at Ecto-sp13_S_contig82343:3..194- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGAGCGCCGGGATCAAGCCGACGTCGATCGTGTCGTACAATCACCTCGG
GAACAACGACGGCAGGAACCTCTCGGCGCCGCAGCAGTTCCGTTCGAAGG
AGATCAGCAAGTCTAACGTCGTGGACGACATGGTGGACTCGAACAAGATG
CTCTACAAGGAGGGCGAGCACCCTGACCACGTCGTGAGTGTT
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