mRNA_Ecto-sp13_S_contig8232.19589.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: D8LR28_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR28_ECTSI) HSP 1 Score: 804 bits (2077), Expect = 2.180e-290 Identity = 419/451 (92.90%), Postives = 424/451 (94.01%), Query Frame = 1
Query: 76 MRAASFVSWPSLQTIFARSIRGGGALSHHAGGLHMHP--FHTMTGHPGLHHLRWRQPQRWCNIRERRYDGLCDRNAGPRRLVVRCLNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAHAWVDERAAGTQYSAVQQEASVVLAQ 1422
MRAASFV+WPSL T FARS RGG ALSHHAGG HMH HTMTGHPG HHLRWRQPQRWCN RERRYDGLCD NAGPRRLVVRCLNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASI WE+PTDPPEG PPPDIPGRQK RKSSPKWMDLVLDLGPSDRQLLKPVPDE RPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSH FRDPPSVREKLIEGLSQSGDTV+PEVMVARRLKIFLEDDLDRCFPRDRW RALAHPTRLPA+V+R AGGEAT AA AAGGEGVGVEAG VAATAQ GRVDGVESDGAATAP PALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAHAWVDERAAGTQYSAVQQE SV AQ
Sbjct: 1 MRAASFVTWPSLPTAFARSFRGG-ALSHHAGGFHMHHTRMHTMTGHPGHHHLRWRQPQRWCNTRERRYDGLCDPNAGPRRLVVRCLNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASIAWEEPTDPPEGAPPPDIPGRQKGRKSSPKWMDLVLDLGPSDRQLLKPVPDEQRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVMPEVMVARRLKIFLEDDLDRCFPRDRWVRALAHPTRLPAQVSRCAGGEATAAATAAGGEGVGVEAGVVAATAQSGRVDGVESDGAATAPVPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAHAWVDERAAGTQYSAVQQETSVAPAQ 450
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: A0A6H5KW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW92_9PHAE) HSP 1 Score: 553 bits (1424), Expect = 2.550e-192 Identity = 309/382 (80.89%), Postives = 320/382 (83.77%), Query Frame = 1
Query: 337 MLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTV-------------------LPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSF-GFQAVTLGSRVLRSDVAVNALLALAHAWVDERAAGTQYSAVQQEASVVLAQ 1422
MLEP+EVVRDEEGNLSATLPAADSRTAHVRGVLKVENGE VRVGVVNAGRMDDASITWEDPTDPPEGTPPPD+PGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDE RPKVALMLAVPRPL+LERILPVVASLGVTTIVLCQAKKVPKFYFGSH FRDP SVR KLIEGLSQ D V LPEV+VARRL IFLEDDLDRCFPRDRW RALAHPTRLPA+VAR AGGEAT AA AGGEGVGVEAG VAAT Q+GRVDGVESDGAAT PAPALRFSQIEPPKG G+ + W E+ +F +AVTLGSRVLRSDVAVNALLALAHAWVDERAAGTQYSAVQQEASVV AQ
Sbjct: 1 MLEPAEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGEPVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDVPGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDEQRPKVALMLAVPRPLKLERILPVVASLGVTTIVLCQAKKVPKFYFGSHFFRDPLSVRAKLIEGLSQVSDEVRVFRQVKHFDNMENRAAFVLPEVIVARRLNIFLEDDLDRCFPRDRWVRALAHPTRLPAQVARCAGGEATAAATVAGGEGVGVEAGVVAATTQIGRVDGVESDGAATTPAPALRFSQIEPPKG------GIAGSALMHEQWQICFEMSYYATFVKGKAVTLGSRVLRSDVAVNALLALAHAWVDERAAGTQYSAVQQEASVVPAQ 376
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: A0A835YRY5_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY5_9STRA) HSP 1 Score: 224 bits (572), Expect = 6.130e-64 Identity = 165/417 (39.57%), Postives = 211/417 (50.60%), Query Frame = 1
Query: 301 PRRL---VVRCLNRIMLEPSEVVRDEEG-NLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASITWEDPTDPPEG----------------TPPPDIP---------------------GRQKDRKSSPKWMD----------LVLDLGPSDRQLLKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAHAWVDERAAGTQYSAVQQ 1398
PRRL VR LNR+M+EP EV + G + L D+RT H+R +LKVE+ +VR GVV+AG P G TP +P R D S+ W+D L LDLG +L P+P +RP+V L+LA PRPLQLER+LP+++SLGV ++VL A KV K YFGSH+ R P ++R KL+EG +QSG TVLP + RRLKIFLED+L+ +PRD R +AHPTR +D T PAP R S + PP+ V++AVGPEGGW EP EL++ ++ GF VTLG+RVLRSDVAVNALLALAH WVD A + +A Q
Sbjct: 48 PRRLWQLTVRHLNRVMIEPEEVQLADGGESCFCVLAHNDTRTEHLRSILKVEDAGTVRTGVVDAGECHATGKHASSPHPQAHGGGAACADTMVHASALCTPTAAVPRSAHAVAHRHXXXXXXXXXXAARSCDA-SAVTWLDSAAAERSAAPLRLDLGAP--AILAPLPPRNRPRVDLLLAAPRPLQLERMLPMISSLGVDSLVLINAAKVEKSYFGSHLMRKPEALRAKLVEGCTQSGSTVLPRTTIKRRLKIFLEDELESLYPRDTCLRVIAHPTR---------------------------------------------ADN--TTPAP--RLSTLPPPEKATAHTARVVIAVGPEGGWDEPFELEMFEAHGFVPVTLGTRVLRSDVAVNALLALAHDWVDSLAEKSPAAAADQ 412
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: A0A7S1BIA7_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIA7_9STRA) HSP 1 Score: 190 bits (482), Expect = 3.540e-51 Identity = 143/345 (41.45%), Postives = 180/345 (52.17%), Query Frame = 1
Query: 325 LNRIMLEPSEVVRDEEGNL-SATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDEHRPK-VALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFP---RDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALA 1344
LNR + +PSEV D G S T+ D RT H VL V+NGE VR G+V G D+A++TW P I + + P L L L R ++ P+ V+L+LA PRPL L RILPVV+ +GV +VLC A KVPK YFGSH+FR + + L+EGL Q+GD LPEV VARRLKIFLEDDLD FP R R +AHPTR + +++ GG+ + RV VE AP+P P +L+AVGPEGGW E E+ L + GF+ VTLG R LR+DVAV LL LA
Sbjct: 79 LNRFLFDPSEV--DTSGEFPSVTIAVDDYRTVHAAKVLGVQNGEVVRAGIVGTGLTDEATVTW---------IPSGKIKKAEPTQNGGPPGP-LRLSL----RNMIPASDGGAGPRCVSLILACPRPLALRRILPVVSMMGVDRLVLCGASKVPKDYFGSHLFRKEEEITKLLVEGLCQAGDVRLPEVTVARRLKIFLEDDLDDIFPPPERGGPTRVIAHPTR--SGISKEKGGKIEM------------------------RVRDVEL----YAPSPMGSNDSSHHPS--------ILLAVGPEGGWEEEYEIDLFRKHGFEVVTLGQRTLRTDVAVITLLGLA 369
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: A0A6V2MGD3_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MGD3_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.310e-50 Identity = 147/379 (38.79%), Postives = 189/379 (49.87%), Query Frame = 1
Query: 325 LNRIMLEPSEVVR-----------DEEGNLSA---TLPAADSRTAHVRGVLKVENGESVRVGVV---------------NAGRM-DDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLD---LGPSDRQLLKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVG-----VLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAH 1347
LNR + +P EV +EE + +A TLP D RT H +L V NG+++R G+V N+G + D+A I W PEG P + D S + + L PSD + V+L+LA+PRPLQL RILP+VA LGV +VL A+KVPK YFGSH+FR P +R LIEGL Q+GD +P+V V RRLK FLEDDLD FP D +AR +AHP R E + +E GE PAP LR + P+ + +++AVGPEGGW E EL + Q GFQ +TLG RVLRSDVAV +LL+LAH
Sbjct: 109 LNRFLFDPCEVEGLIKPNNNDDECNEENSSTAPYVTLPKNDYRTVHAAKILNVHNGDTIRAGIVGEDDLISNDDASSYQNSGLITDEAVIEWL-----PEGKIKKAEPTKNGDPPGSLRVLLHSLTSPYTTPSDDTASSS--SSYSQPVSLILALPRPLQLGRILPMVAQLGVDHLVLTSAQKVPKDYFGSHLFRKPNELRRHLIEGLCQAGDVKIPKVTVVRRLKPFLEDDLDSMFPLDEYARVIAHPQR----------------------EKIVLENGET------------------IIPAPPLRMRDVVFPESSNTEQEQHQQPRIVLAVGPEGGWAEDYELNMFQKCGFQQITLGKRVLRSDVAVVSLLSLAH 440
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: R1F0S1_EMIHU (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F0S1_EMIHU) HSP 1 Score: 182 bits (462), Expect = 2.650e-49 Identity = 137/348 (39.37%), Postives = 184/348 (52.87%), Query Frame = 1
Query: 307 RLVVRCLNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAHA 1350
R V CLNR++LEPSE G+ +ATLPA D RT HVR VL+ +G S+R GV++ G D+A++ W +PG D L L LG R L+P RP++ L+LA+PRPLQ R+LP+VASLGV T+ + A K K +F SH+ R+ + +++L L+ GDT +P V+V RRL+ L D L + R +AHP RR G +A A G A++Q G DGA + P VL+AVGPEGGW EP EL+LL+ GF+ VTLGSR LR+DVAV +LL++AHA
Sbjct: 24 RCAVACLNRLLLEPSECA----GDGTATLPADDPRTQHVRVVLRARDGASIRAGVLDRGSSDEATVCW--------------LPGGADDPPG------LRLALGEPSR--LRPA---ERPRIDLLLAMPRPLQFGRLLPMVASLGVGTVYVTAAAKTEKSFFSSHLLREDQAAQQQLRAALA--GDTAVPRVVVDRRLRSLLRDRLPQY-----GRRLVAHP--------RREGRDARTVGEALSG----------LASSQAAIDAGEGQDGAGSGPR--------------------VLLAVGPEGGWDEPAELELLREHGFEEVTLGSRTLRTDVAVVSLLSVAHA 297
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: B7FST2_PHATC (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FST2_PHATC) HSP 1 Score: 182 bits (461), Expect = 9.020e-49 Identity = 131/351 (37.32%), Postives = 186/351 (52.99%), Query Frame = 1
Query: 325 LNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNA----GRM-DDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLDLGPSDRQL----LKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALR-FSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAH 1347
LNR + + SEV + S TLP D RT H +L + NG ++R G+V+ G + DDA++ W PEG K +K+ P L P + L+ ++ P V+L+LA+PRPLQL R+LP+++ +GV +VL QA+KVPK YFGSH+ R+P +REKLIEGL Q+GD LP++ + R L+ FL +++D FP++++ARA+AHP R SD P +L+ Q+E P ++VAVGPEGGW EPDEL + GFQ +T+G+RVLRSD AV +LL+LAH
Sbjct: 47 LNRFLFDTSEVKYTDTELPSITLPRDDFRTIHASKILGLRNGNTIRAGLVSCEVHQGLLTDDATVQWI-----PEG----------KVKKAEP----LGNGNPPGSLHIHLNGLQAPAEQLVPSVSLILALPRPLQLGRMLPMISQMGVNHLVLAQAQKVPKDYFGSHLLRNPEELREKLIEGLCQAGDVRLPQLHIVRNLRDFLTNEVDEIFPKNQYARAIAHPQRT--------------------------------------------SD-----PMGSLKKMKQVEFPV----KSSRLVVAVGPEGGWEEPDELDRFRDCGFQQITMGARVLRSDCAVVSLLSLAH 325
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: A0A7S4NPP0_GUITH (16S rRNA (uracil(1498)-N(3))-methyltransferase n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NPP0_GUITH) HSP 1 Score: 182 bits (462), Expect = 1.120e-48 Identity = 124/356 (34.83%), Postives = 179/356 (50.28%), Query Frame = 1
Query: 289 RNAGPRRLVVRCLNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPS-VREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTR--LPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAH 1347
RN + VRCLNR++ EP EVV + + L +D R H++ +LK+ENG+S+R+GVV+AG+ +DA + W+D +G+ L L + S QL P + P++ L++A+PRP L L + A +GV ++ C A KV + YFGSH+ R P S +R+ L EGL Q+G+T LP+V VA+RLK FLE+ LD+ P R + HP + LP P P +R Q+ PP G +LV VGPE GW +P EL+LL GFQ ++LG R R++VA+ +LLALA+
Sbjct: 69 RNRRLNHMQVRCLNRLLFEPEEVVPSSQSSCLLYLAKSDKRVTHIKKILKLENGQSLRIGVVDAGKEEDAVLEWQD-----DGS--------------------LKLQISQSAEQLCAPYTADKIPRIDLLIALPRPPNLGDFLGIAAQMGVANVIFCNANKVQQDYFGSHLLRPPMSKMRQALKEGLEQAGETYLPKVHVAKRLKYFLEEQLDQICPDT--IRMVGHPQKSWLP--------------------------------------------------PLPPMRDVQV-PPNG------RILVGVGPEAGWQDPYELELLGEHGFQGISLGPRTYRTEVALISLLALAN 340
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: K0SJH0_THAOC (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJH0_THAOC) HSP 1 Score: 182 bits (461), Expect = 2.220e-48 Identity = 143/382 (37.43%), Postives = 188/382 (49.21%), Query Frame = 1
Query: 325 LNRIMLEPSE--VVRDEEGNLSAT--LPAADSRTAHVRGVLKVENGESVRVGVVN----------AGRM-DDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPKWMDLVLDLGPSDRQLLKP---VPDEHRPKVALMLAVPRPLQLER-----------------------ILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAH 1347
LNRIM + +E VV D+ AT LP D RT H+ L ++NG+ VR G V G M D+A + W PEG P R ++ S K VL P L + + P+V+L+LA+PRPLQL+R +LP+VA LGV ++L A+KVPK YFGSH+FR P +R L+EGLSQSGD LP V V++RLKIFLED+LD FPR ++ R +AHP R + GR+ R S I+ D + +L+AVGPEGGW EP EL + Q GF+ +TLG+RVLR+DVAV +LLALA+
Sbjct: 40 LNRIMFDATELSVVSDQSKGYLATVTLPKDDYRTRHIAKTLNLQNGDCVRAGCVRDRDPSEFDSLGGLMTDEAFVEWL-----PEGKIKKASPTRNREPPGSLK----VLIPNPPKTSLWEDRYGAETDDTPRVSLLLALPRPLQLQRWGLFIQCENSLEFWSLLTNFRIRLLPMVAQLGVENLILTNARKVPKDYFGSHLFRKPSVLRGLLVEGLSQSGDVRLPRVTVSKRLKIFLEDELDELFPRSQYERIIAHPQRKD----------------------------------ETGRM---------------TRMSDIKV-NATDGSPRRILLAVGPEGGWEEPYELDMFQKLGFKRITLGTRVLRTDVAVVSLLALAN 362
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Match: A0A1E7F786_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F786_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.620e-47 Identity = 130/347 (37.46%), Postives = 182/347 (52.45%), Query Frame = 1
Query: 325 LNRIMLEPSEVVRDEEGNLSAT---LPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDIPGRQKDRKSSPK-WMDLVLDLGPSDRQLLKPVPDEHRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHIFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFL-EDDLDRCFPRDRWARALAHPTRLPAEVARRAGGEATVAAPAAGGEGVGVEAGEVAATAQVGRVDGVESDGAATAPAPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQS-FGFQAVTLGSRVLRSDVAVNALLALAH 1347
LNR + P EVVR E + S LP D RT H L ++NG+ +R G+V DDA ++ T E P P + + + +P ++ + L+ S + P V+L+LA+PRPLQL RILP+++ +GV +VL AKKVPK YFGSH+F+ P + EKLIEGL Q+GD LP++ + R + FL ++ D FP++ +AR L+HP R ++ + P LR SQ+E PK + ++VAVGPEGGW EP EL +L++ GFQ +TLGSR LRSDVAV LL+LAH
Sbjct: 38 LNRFLFSPEEVVRSTEDSTSIVEIKLPKDDYRTIHAAKTLGLKNGDLIRAGLVGGSSGDDAGQWTDEATV--EWIPIPPVKKAEVLKNGNPPGFLSIRLNNLKSIDNDSQSSPATDPINVSLILALPRPLQLGRILPMISQIGVDHLVLTSAKKVPKEYFGSHLFKKPELLTEKLIEGLCQAGDVRLPQLHLVRNFRNFLLSEEFDNLFPKETYARVLSHPKR-----------QSDLEEP--------------------------------------LRMSQVEFPK---TSPSRIVVAVGPEGGWEEPYELDMLKNDCGFQQITLGSRTLRSDVAVCGLLSLAH 330 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8232.19589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8232.19589.1 >prot_Ecto-sp13_S_contig8232.19589.1 ID=prot_Ecto-sp13_S_contig8232.19589.1|Name=mRNA_Ecto-sp13_S_contig8232.19589.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=450bp MRAASFVSWPSLQTIFARSIRGGGALSHHAGGLHMHPFHTMTGHPGLHHLback to top mRNA from alignment at Ecto-sp13_S_contig8232:150..5281+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8232.19589.1 ID=mRNA_Ecto-sp13_S_contig8232.19589.1|Name=mRNA_Ecto-sp13_S_contig8232.19589.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5132bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8232:150..5281+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8232:150..5281+ >mRNA_Ecto-sp13_S_contig8232.19589.1 ID=mRNA_Ecto-sp13_S_contig8232.19589.1|Name=mRNA_Ecto-sp13_S_contig8232.19589.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8232:150..5281+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |