prot_Ecto-sp13_S_contig8219.19577.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8219.19577.1
Unique Nameprot_Ecto-sp13_S_contig8219.19577.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8219.19577.1 vs. uniprot
Match: A0A6H5JI44_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI44_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.340e-19
Identity = 74/114 (64.91%), Postives = 74/114 (64.91%), Query Frame = 0 
Query:    3 DLLVGLGGHHSSDSSEGPEVDDLDVIDTHSELQYPGIPSGAKLPFRTGLLNAGMDDDIPFEGQLGPPGXXXXXXXXXXXXXRSVAGRGATLLSPESKEDYA--AAPAMDLGDME 114
            DLLVGLGGH  SDSSEGPEVDDLD                         LNAGMD DIPFEGQLGPPGXXXXXXXXXXXXX        TLLSPESKED A  A PAMDLGDME
Sbjct:  387 DLLVGLGGHRLSDSSEGPEVDDLDRF-----------------------LNAGMDGDIPFEGQLGPPGXXXXXXXXXXXXXXX------TLLSPESKEDDADAAVPAMDLGDME 471
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8219.19577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI44_9PHAE2.340e-1964.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8219contigEcto-sp13_S_contig8219:4094..5226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8219.19577.1mRNA_Ecto-sp13_S_contig8219.19577.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8219 4094..5226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8219.19577.1 ID=prot_Ecto-sp13_S_contig8219.19577.1|Name=mRNA_Ecto-sp13_S_contig8219.19577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
EEDLLVGLGGHHSSDSSEGPEVDDLDVIDTHSELQYPGIPSGAKLPFRTG
LLNAGMDDDIPFEGQLGPPGGGGGGGGGGGGGGRSVAGRGATLLSPESKE
DYAAAPAMDLGDME
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