mRNA_Ecto-sp13_S_contig8215.19572.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: A0A6H5KF67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF67_9PHAE) HSP 1 Score: 375 bits (964), Expect = 5.450e-128 Identity = 223/227 (98.24%), Postives = 225/227 (99.12%), Query Frame = 1
Query: 1 AAATSGGEKMSLNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMHEGDGHGQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
AAATSGGEKMSLNVMKILLQ+CLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGH+MPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAH IMHEGDGHGQQQHGGGKAMADGSSVTA XXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG
Sbjct: 80 AAATSGGEKMSLNVMKILLQMCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHLMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHSIMHEGDGHGQQQHGGGKAMADGSSVTAVXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 306
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: D7G198_ECTSI (ZIP divalent metal transporters n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G198_ECTSI) HSP 1 Score: 282 bits (721), Expect = 1.340e-92 Identity = 179/218 (82.11%), Postives = 181/218 (83.03%), Query Frame = 1
Query: 28 MSLNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMHEGDGHGQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
MSLNVMKILLQ IRSFVESKRAISMANAFSGGVFLSLAFGHMMPHAT GFEE+GLPANVPYFLTLSGYMLIFFVEKVAFDAH+IMHEGDGHGQQQH XXXXXXXXXXXXXXXXX LLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG
Sbjct: 1 MSLNVMKILLQ----------------IRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATLGFEESGLPANVPYFLTLSGYMLIFFVEKVAFDAHNIMHEGDGHGQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAIILLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 202
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: W7T5N3_9STRA (Zip zinc transporter family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5N3_9STRA) HSP 1 Score: 206 bits (524), Expect = 8.040e-61 Identity = 127/252 (50.40%), Postives = 156/252 (61.90%), Query Frame = 1
Query: 1 AAATSGGEK---MSLNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMHEGDGHGQQQHG----------GGKAMADGS----SVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGESRALSPS 705
AA +GG MSL K+ LQ+ LT LNVVCWLVPMKI+ F E++ ISMANAFSGGVFLSLAFGHM+PHA GFE A NVP+F+TL+GY+LIFFVEK+AFD H + D H + H A+ +G+ S + LLAL VH++ ETMALGLS + AGLLA SI LHQPAES+ALLV+FLKSGL+E+Q +YLS+FS +G G L+ S
Sbjct: 129 AACGAGGVTTFGMSLPFFKMFLQLLLTGLNVVCWLVPMKIKRFRENQEMISMANAFSGGVFLSLAFGHMIPHAVEGFETASFAHNVPFFVTLAGYLLIFFVEKIAFDTHALT---DNHHEHHHALPALPPADIAEKTALTNGAVPEKSTVSNSRLVTPPASPPPTASGRSALVLLLALAVHSIFETMALGLSDTPLQAGLLATSIALHQPAESIALLVAFLKSGLTEQQTTRYLSLFSAVGFLGVVLGLAVS 377
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: A0A836CLP2_9STRA (ZIP divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP2_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.170e-60 Identity = 107/190 (56.32%), Postives = 134/190 (70.53%), Query Frame = 1
Query: 112 RSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMHEGDGHGQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
R F ESK ISMANAFSGGVFLSLAFGHM+PHA HGFE +GLP + P++LTL+GY+LIFFVEK+AFD H ++H+ +G Q K + +S LLAL VH+L ETMALGLS++R++A LLAMSIGLHQPAESLALLVSFLK+GL + +++K L++FSC+GP G
Sbjct: 2 RRFTESKVGISMANAFSGGVFLSLAFGHMLPHAAHGFENSGLPESTPFYLTLTGYLLIFFVEKIAFDTHEMLHDAHDNGPQSPSTIKPIDSSNSAQVAASGRSATVL-------------LLALSVHSLFETMALGLSTSRLNALLLAMSIGLHQPAESLALLVSFLKTGLPQGKIVKMLALFSCVGPLG 178
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: A0A1Z5JFF0_FISSO (Solute carrier family 39 (Zinc transporter), member 1/2/3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFF0_FISSO) HSP 1 Score: 198 bits (504), Expect = 4.180e-58 Identity = 112/226 (49.56%), Postives = 144/226 (63.72%), Query Frame = 1
Query: 28 MSLNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMHEGDGHGQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAGESRALSPS 705
+ LN K++ Q LTT+NV+CWL+P+K + ++K A+SMANAFSGGVFLSLAFGH++P HGF A LP PY L L+GY+LIFFVEKVAFDAH I+HE G G + + L AL VH+++E MALGL++N LL +SI LHQPAES+ALLV+FLKSG+ E QV+KYLSIFSC+GP G + ++ S
Sbjct: 134 LPLNSWKVIFQALLTTMNVLCWLIPLKSKKISQNKFALSMANAFSGGVFLSLAFGHLIPECVHGF--ANLPEETPYLLVLAGYLLIFFVEKVAFDAHEILHEMQGEGXXXXXXXXXQVVNTKESKQEVTPAGSGRGAVIL--------LGALAVHSVLEMMALGLANNFGDCALLTLSISLHQPAESIALLVAFLKSGMPEDQVLKYLSIFSCMGPIGVALGMAVS 349
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: A0A448Z4G5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4G5_9STRA) HSP 1 Score: 196 bits (497), Expect = 7.950e-57 Identity = 109/215 (50.70%), Postives = 140/215 (65.12%), Query Frame = 1
Query: 46 KILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLP---ANVPYFLTLSGYMLIFFVEKVAFDAHHIMHEGDGHGQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
KIL Q LTT+NVVCWLVP++ +SF E+K A+S+ANAFSGG+FLSLAFGHM+P H + + + PY L LSGY+LIFFVEKVAFDAH IMHE + GQ G + + GS T L ALGVH+++E MALGLS + + +L SI LHQPAES+ALLV+FLKSG+ ++ +I +LS+FS +GP G
Sbjct: 165 KILFQAFLTTINVVCWLVPLRSKSFGENKLALSLANAFSGGIFLSLAFGHMIPECVHEYAASAVGDYNEATPYMLVLSGYLLIFFVEKVAFDAHEIMHEMEQGGQSDDGNAVSKSSGSDATTTKNTGRSAMIL------------LAALGVHSILEMMALGLSDSFSDSAILTXSIALHQPAESIALLVAFLKSGMPKKDIITFLSVFSAMGPIG 367
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: B5Y3R5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3R5_PHATC) HSP 1 Score: 193 bits (491), Expect = 5.770e-56 Identity = 112/230 (48.70%), Postives = 144/230 (62.61%), Query Frame = 1
Query: 34 LNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMHE--GDGH------------GQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
LN K++ Q LT +NV+CWLVP++ + E+K A+S+ANAFSGGVFLSLAFGH++P HGFE + P+ L L+GY+LIFFVEKVAFDAH I+HE GD H ++ GG +A + SS + L AL VH+++E MALGL+ LL MSI LHQPAES+ALLV+FLKSG+ E Q+I+YLSIFSC+GP G
Sbjct: 151 LNAWKVIFQAILTAINVICWLVPLRSKKMSENKLALSLANAFSGGVFLSLAFGHLIPECIHGFEASTYAETTPFMLVLAGYLLIFFVEKVAFDAHDILHEMQGDDHHXXXXPDXXXXXXKKSSGGTEAASSLSSGRSAVIL-------------------LGALAVHSILEMMALGLADTFGDCALLTMSISLHQPAESIALLVAFLKSGVPEAQIIQYLSIFSCMGPIG 361
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: A0A7S1YY76_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YY76_TRICV) HSP 1 Score: 188 bits (478), Expect = 2.500e-54 Identity = 108/222 (48.65%), Postives = 146/222 (65.77%), Query Frame = 1
Query: 28 MSLNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMHEGD-GH---GQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
+ LN+ K++ Q LTT+NV+CWL+P++ +K A+S+ANAFSGGVFLSLAFGH++P HGF A +PY L L GY+LIFFVEKVAFDAH +MH G+ GH G HG KA+++G+S L AL VH+++E ALGL++ + LL++SI LHQPAES+ALLV+FLKSG+ + Q+++YLSIFS +GP G
Sbjct: 117 LPLNLWKVIFQAMLTTMNVLCWLIPLRSEKISSNKLALSLANAFSGGVFLSLAFGHLIPECVHGFGPEYNEA-LPYMLVLGGYLLIFFVEKVAFDAHGLMHAGEEGHDERGHHTHGKEKAVSNGTS-----NKDDAAEGGEGLGSGRSAVILLGALAVHSVLEMTALGLANTFGESALLSLSIALHQPAESIALLVAFLKSGMPKPQIVQYLSIFSAMGPVG 332
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: A0A1E7FJQ0_9STRA (Zinc/iron permease n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJQ0_9STRA) HSP 1 Score: 184 bits (468), Expect = 4.370e-54 Identity = 114/224 (50.89%), Postives = 138/224 (61.61%), Query Frame = 1
Query: 34 LNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEE------AGLPAN--VPYFLTLSGYMLIFFVEKVAFDAHHIMHEGDGHGQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
LN KI+ Q LT LNVVCWLVP+K +SF E+K A+S+ANAFSGGVFLSLAFGH++P HGF GL +N PY L LSGYMLIFFVEKVAFDAH +HE + H Q K + V L AL VH+++E ALGLS + LL +SI LHQPAES+ALLV+FLKSG+ + Q+I +LSIFS +GP G
Sbjct: 7 LNGWKIIFQTFLTILNVVCWLVPLKSKSFGENKLALSLANAFSGGVFLSLAFGHLIPECVHGFSSNTGGLVGGLMSNEATPYMLVLSGYMLIFFVEKVAFDAHGALHEME-HAQDNTNKVKGNNKKNGVA-----HTHSKDAQQQNSGRSAVILLAALAVHSILEMAALGLSDTFSDSALLTVSIALHQPAESIALLVAFLKSGMPKNQIIVFLSIFSLMGPIG 224
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Match: A0A6S8XAZ7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XAZ7_9STRA) HSP 1 Score: 189 bits (481), Expect = 8.940e-54 Identity = 107/219 (48.86%), Postives = 140/219 (63.93%), Query Frame = 1
Query: 34 LNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLSLAFGHMMPHATHGFEEAGLPANVPYFLTLSGYMLIFFVEKVAFDAHHIMH---EGDGHGQQQHGGGKAMADGSSVTAXXXXXXXXXXXXXXXXXXXXXXXLLALGVHALMETMALGLSSNRVSAGLLAMSIGLHQPAESLALLVSFLKSGLSERQVIKYLSIFSCLGPAG 681
LN+ K++ Q+ LT +NV CWL+P++ + E+K A+ +ANAFSGGVFLSLAFGH++P HGFE GL +PY + L GY+LIFFVEKVAFDAH +MH GDG G + D XXXX L AL VH+++E ALGL+ + LL++SI LHQPAES+ALLV+FLKSG+ + +IKYLS+FS +GP G
Sbjct: 222 LNMWKVIFQIFLTAMNVACWLIPLRAKKITENKYALGIANAFSGGVFLSLAFGHLIPECIHGFEGTGLNEALPYMIVLGGYLLIFFVEKVAFDAHGLMHGCGPGDGSGDEHGKEVVVKKDXXXXXXXXXXGDTATATATANNGRSAVILLGALAVHSILEMTALGLARTFGDSALLSLSIALHQPAESIALLVAFLKSGMPKSDIIKYLSVFSAMGPVG 440 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8215.19572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8215.19572.1 >prot_Ecto-sp13_S_contig8215.19572.1 ID=prot_Ecto-sp13_S_contig8215.19572.1|Name=mRNA_Ecto-sp13_S_contig8215.19572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=227bp MSLNVMKILLQVCLTTLNVVCWLVPMKIRSFVESKRAISMANAFSGGVFLback to top mRNA from alignment at Ecto-sp13_S_contig8215:1202..2744+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8215.19572.1 ID=mRNA_Ecto-sp13_S_contig8215.19572.1|Name=mRNA_Ecto-sp13_S_contig8215.19572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8215:1202..2744+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8215:1202..2744+ >mRNA_Ecto-sp13_S_contig8215.19572.1 ID=mRNA_Ecto-sp13_S_contig8215.19572.1|Name=mRNA_Ecto-sp13_S_contig8215.19572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=681bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8215:1202..2744+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |