mRNA_Ecto-sp13_S_contig821.19568.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig821.19568.1
Unique NamemRNA_Ecto-sp13_S_contig821.19568.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A6H5KUQ1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUQ1_9PHAE)

HSP 1 Score: 574 bits (1479), Expect = 3.390e-196
Identity = 307/331 (92.75%), Postives = 310/331 (93.66%), Query Frame = 1 
Query:   70 MNKPGHRSKASYLPCDTQSASQPGRRRARRQLTKLATTSSCLLLLVLL-CHRQREHLVCGLVAPSHGGVASSTFSRSSGVSGSSVSTVGGSPRWYGRCPRPKHGLEMTLTSPPPRTRQQQETETINGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEGEMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            MNKPGHRSKASYLP  TQSASQPGRRRAR QLTKLATT           C RQREHLV GLVAPSH GVA STFSRSSGVSGSS STVGGSPRWYGRCPR KHGLEMT+TSPPPRT+QQQETETINGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEGEMRLLEIEDGEAEGAGGETDRLP+VYDPE LKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ
Sbjct:    1 MNKPGHRSKASYLPRYTQSASQPGRRRARSQLTKLATTXXXXXXXXXXXCRRQREHLVYGLVAPSHVGVAKSTFSRSSGVSGSSASTVGGSPRWYGRCPRTKHGLEMTVTSPPPRTQQQQETETINGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEGEMRLLEIEDGEAEGAGGETDRLPVVYDPEALKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 331
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A836CGN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN4_9STRA)

HSP 1 Score: 226 bits (577), Expect = 5.350e-65
Identity = 113/176 (64.20%), Postives = 140/176 (79.55%), Query Frame = 1 
Query:  532 MQALRGAGIRDYASAEGEMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            M A+RGA + DY  A+GEMRL+++++ + E       +LPLVY PE+L++Y+ RRP +  +RTLQLAGAF GF+TS  +D  RG +K NE+ RA +LREIITSLGPFYIKLGQALSIRPDILSP AMVELQRLCDKVPS+DS IA  T+E E G+PV E++ +ITPEPLAAASLGQ
Sbjct:    1 MDAMRGAALSDYDVAQGEMRLIDVDETDEE-------KLPLVYQPEILEEYYKRRPHLVVQRTLQLAGAFGGFMTSLAIDAARGTLKTNEVKRAAELREIITSLGPFYIKLGQALSIRPDILSPKAMVELQRLCDKVPSYDSKIAMATIERELGKPVLEVYSEITPEPLAAASLGQ 169
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A7S2C1P6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1P6_9STRA)

HSP 1 Score: 201 bits (510), Expect = 5.130e-59
Identity = 110/199 (55.28%), Postives = 138/199 (69.35%), Query Frame = 1 
Query:  469 MSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEG--EMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            MSAQM +MR D+E++E+    MQALRGA I D  SA    EMR+++  D        + D LPL Y P+ LK YF++RP    +R  Q+    +GFV S L+D V G  ++ E+ RA +LR+ ITSLGPF+IKLGQALSIRPD+LSP AMVELQ+LCDKVP+F S IA  T+E E GRPV+EIF  I  EP+AAASLGQ
Sbjct:    1 MSAQMKEMRADMEKDEKTALMMQALRGANINDDMSAVAGMEMRIVQTTD--------KGDALPLTYQPDALKTYFSKRPGAVIQRVFQVLSTSAGFVGSVLVDTVTGNTEDMEVRRAAELRDTITSLGPFFIKLGQALSIRPDVLSPRAMVELQQLCDKVPTFPSDIAMATIEKELGRPVDEIFSHIDAEPVAAASLGQ 191
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A7R9TKH8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TKH8_9VIRI)

HSP 1 Score: 209 bits (533), Expect = 9.900e-58
Identity = 111/202 (54.95%), Postives = 144/202 (71.29%), Query Frame = 1 
Query:  460 VREMSAQMSQMRKDLEENEEAQAYMQALRGAGIR--DYASAEGEMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            V+EM+AQM  +R+ +EE+E+  A M  LRG+ +   D+ASA+  MRLL+  DG +   G E D LPLVY P  +  Y+  R     +R +QL      FV    LD VRG +KENE+ RAI+LR+I+TSLGP YIK+GQAL+IRPD+LSP AMVELQRLCDKVPSFDS IA+  +E E G+PV E++ ++TPEP+AAASLGQ
Sbjct:   12 VKEMAAQMKDVRRQMEEDEDLSALMAGLRGSNLNEEDFASADVNMRLLDF-DGSSANVGSE-DALPLVYSPTGIAAYWGARKGAIAKRIVQLTSVAGSFVAGLALDAVRGTLKENEVKRAIELRDIVTSLGPAYIKIGQALAIRPDLLSPAAMVELQRLCDKVPSFDSKIAYECIEEELGKPVSEVYAELTPEPIAAASLGQ 211
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A1Z5JTA5_FISSO (AarF domain-containing kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTA5_FISSO)

HSP 1 Score: 203 bits (517), Expect = 1.340e-55
Identity = 117/205 (57.07%), Postives = 144/205 (70.24%), Query Frame = 1 
Query:  460 VREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEG--EMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLD--LVRGKVKEN-EIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            VR+ S+ M +MR++L +NE+A   MQALRG  + D  +A    EMRL++I       A  + D LP  YDP+ LK +F+ RP     R LQL    +GF+ + L D  L RGK   N E+ RA +LRE+ITSLGPF+IK+GQALSIRPDILSP +MVELQ+LCDKVPSFDS IAF T+E E GRPVEEIF  ITPEP+AAASLGQ
Sbjct:   22 VRDTSSLMQEMRRELAKNEDANLMMQALRGQNLNDDDTAVAGLEMRLVDI-------APRDDDSLPFDYDPQALKVFFSSRPTAVVTRVLQLITVSAGFLVNVLGDQLLQRGKTNANLEVQRAAELRELITSLGPFFIKIGQALSIRPDILSPRSMVELQKLCDKVPSFDSKIAFATIERELGRPVEEIFSKITPEPVAAASLGQ 219
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A2P6U487_CHLSO (Putative aarF domain-containing kinase chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U487_CHLSO)

HSP 1 Score: 202 bits (515), Expect = 4.500e-55
Identity = 113/229 (49.34%), Postives = 159/229 (69.43%), Query Frame = 1 
Query:  385 MTLTSPPPRTRQQQETETINGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRD--YASAEGEMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENE--IARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            +T T+P      ++        T SVR+MS+QM  +R  +EE+E  +  MQ+LRG+ + D  +A +  +MRL+E+E    E A GE   LPLVYDP+ ++ +++RRP   T R LQL G  SGF++S L D +RG + + +  +ARAIQLR+I+TSLGP YIKLGQALSIRPD+LSP AM E+Q+LCDKVPSFDS +A   +  E GRP +E++ +++P+P+AAASLGQ
Sbjct:   31 LTRTAPGASASSRRSVAXXXXATGSVRQMSSQMRDVRAQMEEDENLRVLMQSLRGSNLSDADFADSSVQMRLVEVE----EVADGEA--LPLVYDPDKIEAFWSRRPVAVTTRILQLLGISSGFLSSLLSDYLRGTISDTQQQVARAIQLRDIMTSLGPAYIKLGQALSIRPDLLSPAAMNEMQKLCDKVPSFDSGVAMELINQELGRPWQEVYSELSPQPIAAASLGQ 253
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A5J9UWS7_9POAL (Protein kinase domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UWS7_9POAL)

HSP 1 Score: 202 bits (515), Expect = 5.810e-55
Identity = 112/236 (47.46%), Postives = 159/236 (67.37%), Query Frame = 1 
Query:  361 PRPKHGLE-MTLTSPPPRTRQQQETETINGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRD--YASAEGEMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            PR +HG + + L +P PR+R    ++T  G      EMS ++ ++RK +EE+E+  + M+ LRG  +RD  +A    ++RL+E+E      +    + LPLVY PE++  Y+ +RP+    R +QL     GF++  + DL+  K+KENE+ARAI+LREI+TSLGP YIKLGQALSIRPDILSP AM ELQ+LCDKVPSF   IA   +E E G+P +EI+ +++P P+AAASLGQ
Sbjct:  132 PRHRHGAQALHLLAPKPRSRNDI-SDTRFG------EMSKEIQRVRKQMEEDEQLASLMRGLRGQNLRDEQFADENVQLRLVEVE------STDNNEGLPLVYSPEIISAYWGKRPRAVATRVVQLLSVAGGFISHIISDLITDKLKENEVARAIELREIVTSLGPAYIKLGQALSIRPDILSPSAMTELQKLCDKVPSFPDDIAMALLEEELGKPWQEIYSELSPSPIAAASLGQ 354
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A803Q319_CANSA (Protein kinase domain-containing protein n=5 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q319_CANSA)

HSP 1 Score: 201 bits (512), Expect = 6.770e-55
Identity = 105/209 (50.24%), Postives = 144/209 (68.90%), Query Frame = 1 
Query:  439 INGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEG--EMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            +NG +  + +MS ++ ++R  +EENEE    M+ LRG  +RD   AE   E+RL+E+++         ++ LPLVYDP  +  Y+ +RP+    R +QL     GF++   LD++  KVKENE+ARAI+LREI+TSLGP YIKLGQALSIRPDILSP AM ELQ+LCDKVPSF   +A   +E E GRP +EI+ +++P P+AAASLGQ
Sbjct:   64 VNGVSSRIGDMSKEIKRVRAQMEENEELAILMRGLRGTNLRDSQFAEDNVELRLVEVDES--------SEFLPLVYDPASISAYWGKRPRAVATRIVQLMSVAGGFLSRIALDVINKKVKENEVARAIELREIVTSLGPAYIKLGQALSIRPDILSPSAMTELQKLCDKVPSFPDDVAMALIEEELGRPWQEIYSELSPSPIAAASLGQ 264
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: W9R5E1_9ROSA (ABC1 domain-containing protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9R5E1_9ROSA)

HSP 1 Score: 192 bits (489), Expect = 1.390e-54
Identity = 101/207 (48.79%), Postives = 142/207 (68.60%), Query Frame = 1 
Query:  439 INGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEGEMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            +NG +  + E+S ++ ++R  +EENEE    M+ LRG  +RD   AE  ++L  +E  E+      ++ LPLVY+P+ +  Y+ +RP+    R +QL     GF++   LD++  KVKENE+ARAI+LREI+TSLGP YIKLGQALSIRPDILSP AM+ELQ+LCDKVPSF   +A   +E E GRP + I+ +++  P+AAASLGQ
Sbjct:   74 VNGVSTRIGEVSQEIKRVRAQMEENEELAILMRGLRGQNLRDSQFAEDNIKLRLVEVDES------SEFLPLVYNPDSISAYWGKRPRAVATRIVQLLSVAGGFLSRIGLDVINKKVKENEVARAIELREIVTSLGPAYIKLGQALSIRPDILSPTAMIELQKLCDKVPSFPDDVAMALIEEELGRPWQHIYSELSSSPIAAASLGQ 274
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BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Match: A0A5P1FN94_ASPOF (Protein kinase domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FN94_ASPOF)

HSP 1 Score: 200 bits (508), Expect = 2.530e-54
Identity = 107/233 (45.92%), Postives = 152/233 (65.24%), Query Frame = 1 
Query:  361 PRPKHGLEMTLTSPPPRTRQQQETETINGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEGEMRLLEIEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQ 1059
            P+P +    + +SPP         ++ING       +S ++ ++R  +EE+E+  + M+ LRG  ++D   A+  +RL  +E   AE A    + LPLVYDP+++  Y+ +RP+    R +QL     GF++  + DL+  KVKENE+ARAI+LREI+TSLGP YIKLGQALSIRPDILSP AM ELQ+LCDKVPSF   +A   +E E G+P  +I+ ++TP P+AAASLGQ
Sbjct:   47 PKPNNAEPSSRSSPP---------KSINGSANRFGNVSDEIKRVRAQMEEDEQLASLMRGLRGQNLKDSQFADENVRLRLVEVQAAESA----EALPLVYDPDIISRYWGKRPRAVATRIVQLLSVAGGFLSHLISDLINKKVKENEVARAIELREIVTSLGPAYIKLGQALSIRPDILSPAAMTELQKLCDKVPSFPDDVAMALIEEELGQPWHKIYSELTPSPIAAASLGQ 266
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig821.19568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUQ1_9PHAE3.390e-19692.75Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A836CGN4_9STRA5.350e-6564.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C1P6_9STRA5.130e-5955.28Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7R9TKH8_9VIRI9.900e-5854.95Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A1Z5JTA5_FISSO1.340e-5557.07AarF domain-containing kinase n=2 Tax=Fistulifera ... [more]
A0A2P6U487_CHLSO4.500e-5549.34Putative aarF domain-containing kinase chloroplast... [more]
A0A5J9UWS7_9POAL5.810e-5547.46Protein kinase domain-containing protein (Fragment... [more]
A0A803Q319_CANSA6.770e-5550.24Protein kinase domain-containing protein n=5 Tax=C... [more]
W9R5E1_9ROSA1.390e-5448.79ABC1 domain-containing protein n=1 Tax=Morus notab... [more]
A0A5P1FN94_ASPOF2.530e-5445.92Protein kinase domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig821contigEcto-sp13_S_contig821:764..5709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score376.7
Seed ortholog evalue1.2e-101
Seed eggNOG ortholog2880.D8LQX6
Model size1061
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_001970.1
Cds size1059
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464092.637559-CDS-Ecto-sp13_S_contig821:763..8501681464092.637559-CDS-Ecto-sp13_S_contig821:763..850Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig821 764..850 -
1681464092.652359-CDS-Ecto-sp13_S_contig821:1434..16051681464092.652359-CDS-Ecto-sp13_S_contig821:1434..1605Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig821 1435..1605 -
1681464092.6664307-CDS-Ecto-sp13_S_contig821:2207..23061681464092.6664307-CDS-Ecto-sp13_S_contig821:2207..2306Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig821 2208..2306 -
1681464092.6843603-CDS-Ecto-sp13_S_contig821:3244..34571681464092.6843603-CDS-Ecto-sp13_S_contig821:3244..3457Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig821 3245..3457 -
1681464092.7006595-CDS-Ecto-sp13_S_contig821:5220..57091681464092.7006595-CDS-Ecto-sp13_S_contig821:5220..5709Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig821 5221..5709 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig821.19568.1prot_Ecto-sp13_S_contig821.19568.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig821 764..5709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig821.19568.1

>prot_Ecto-sp13_S_contig821.19568.1 ID=prot_Ecto-sp13_S_contig821.19568.1|Name=mRNA_Ecto-sp13_S_contig821.19568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=353bp
LPPTFWLLILHISTSRPTGNSAAMNKPGHRSKASYLPCDTQSASQPGRRR
ARRQLTKLATTSSCLLLLVLLCHRQREHLVCGLVAPSHGGVASSTFSRSS
GVSGSSVSTVGGSPRWYGRCPRPKHGLEMTLTSPPPRTRQQQETETINGG
TQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEGEMRLLE
IEDGEAEGAGGETDRLPLVYDPEVLKDYFARRPQVATRRTLQLAGAFSGF
VTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILS
PGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAAS
LGQ
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mRNA from alignment at Ecto-sp13_S_contig821:764..5709-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig821.19568.1 ID=mRNA_Ecto-sp13_S_contig821.19568.1|Name=mRNA_Ecto-sp13_S_contig821.19568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4946bp|location=Sequence derived from alignment at Ecto-sp13_S_contig821:764..5709- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCCGCCTACGTTCTGGTTGTTGATCTTACATATCAGCACATCCCGCCC
CACGGGAAACAGCGCAGCCATGAATAAGCCTGGCCATAGAAGTAAAGCTT
CCTATCTCCCATGCGACACTCAATCTGCAAGCCAGCCAGGCCGGCGGAGG
GCCAGGCGTCAGCTCACGAAGCTTGCGACGACGTCGTCATGTTTGCTGCT
GCTGGTGCTGCTTTGTCATCGCCAGCGCGAGCACCTGGTATGTGGCCTCG
TGGCTCCTTCCCACGGTGGCGTAGCCAGTAGCACCTTCAGCAGGAGCAGC
GGCGTGAGCGGGAGCTCTGTTTCTACCGTGGGAGGATCGCCGCGGTGGTA
TGGCAGGTGTCCCCGACCGAAACATGGGCTCGAGATGACGTTGACATCAC
CACCCCCTCGGACACGGCAGCAGCAAGAGACCGAGACGATCAATGGCGGA
ACACAGTCAGTGCGGGAGATGAGCGCACAGATGAGCCAGGTGCGTAACCA
GGCAGGCTTTGGGCCGGCCGACCTCATGGAGTCGTTTTCTGTTGGCCTGC
TGGCTGCTGCTTAGTTGGTGTGAATCGAGTTGTTCTGACTGTCACACTGC
TGTCGTTTGCAGTGCCGGTTGGCTTCATGAGTCACACGCATGCGTACGTT
GCTGCACGTCACATACATACGCCCTCGTCACCGGAATGCTCAGGTGCCGC
AGGCAAAGAGGAATGAGCTTGTCCGCGGCGCCAGGCATGCGATACGCCTG
GGTACCCTGCGTATCACGTTCTTTTTTTGGTGTCTACTTTTGTTGCTGTA
CTGGGCATCCTCAACTTTTACAGACGATGCCAAAAAGATTCCCACACCGA
AAGCAGTATGCCGTACAATGGCCACCTACTTGTAAGCATTGCTGCTACTA
CAGATAGACTGCTGTTTTCCCCCCGAGTTCGATGTGTCACCTCGTAATTT
GAGGGGAAAACAAGACTTTTCGGGGGGGGAGGGGTCTCTGCATGCGCACG
TGAAGTGCACAGAGAGGCGAGATGCTGCGTGAACGGCGGAAGCAAGCTGT
TCTCCGCCTCTTTATTCTGTCGCTGTTGTTTTCCGTTGGTTCATGGTGGA
CCATGATGAAGCTATTATTCCTACTGCTGCGGATGTTGGGGGGCTACTTG
AAACTACTTTCCAAATTGACGACGATACGTTATACCTGAGACGAGAAAAT
GGGCGGGGTACAACAGCAGCCCGGTCGGTCGTCCCGCAATTTGATTAAGG
GGCATTGTTGCGCCGTGGATCGAAGCTGGACGATTCTTGGGAGAATAAAT
GCAGGCCGAATGAAGCTGATGGAAGGACTACACATGTCTCAGATGGTGCT
ATTTACTACGTAGGAGCAACGGTTACAGAGGAAATGCTACCTCACAACGG
TAAATAGTCGTTTTAAGTGGACGCCGTGTACCTACAGAGTTTACGGTCTG
TCTTGCACTCCGGTGTCAGCGTTTTCCCCCTTGTTTTATATGTTCCCTCA
TTGACGGCGGCGGCATTCCTTGACGTCCAAGCACCATACTCCAGTACAAT
AAGGAATTGGACGAATGACGGTACGGCGCCACAACGCGCCATTTTTTCCA
TTCAATCTTTTTTTCAGCCGCCAGGGGTGCTGTAAGAATGCCGACTACAT
GTAGGCCAGGAGCTTTCACCCCGATCTATCAAACTGTGCTCAGGACATCC
CTGGCGCGCGCACGTATGTTGATGGGTGGAACACGTATGGTCATGCACTT
TTTCATCAGCAAGTATTGAGTACGAGGTGACCGTCTTACCACCGCTGCTG
TGAGGAAGGTGTTCGTGAAGAGAACGAAGAGAGGCTCCCTTTCCGCTCAC
CACGATGAATTTAGACCCGTTTCTAAAAGCGAGAGTAACGGCAGAAACTT
GTGTGTCCATGTTGGCAATACCAAACCGAACCCCGAGACCACTCCAGCTT
TTGCCTCAAACTCTCAGGTTGTCATCAGAGCTTGGAGTACCGCTCTCTTC
ACTTCCCCTTCCCTGTGCCGATTTCGACAAGAGTAGCCCTGAGAAGGGTC
TACGTGGGTGTCCGTTTGCCTGCTGCTGAAGCCCTTTCCCCAGCAGAAGA
GGGACCGGGGCTGTATGTCATCGTGCGTTGAGGATCGCATTTGCACCACA
CCAACGAAAAACACATCACAGCCGTTTTTCCAATTTTCTGCGTAGAAGTA
TATTTATGTTCTAGCTTCAACCGAACACCCACGTTTTCCGCCAACTCGTC
AGATGAGGAAAGATCTCGAAGAAAACGAGGAGGCCCAGGCGTACATGCAG
GCGTTGCGGGGGGCGGGGATCAGGGACTACGCCTCCGCCGAAGGAGAGAT
GCGTCTCCTGGAGATCGAGGACGGCGAGGCGGAGGGGGCGGGAGGAGAGA
CGGACAGGCTTCCGCTGGTGTATGACCCGGAGGTCCTCAAGGATTACTTT
GCTCGAAGACCTCAGGTGTGTGTGGGGGTGTACTCATAGCGGTGCATGCC
AGGCACAGTAGTCGTTAGACTGTTTGACCTCGCATACCTACATGGGGAAA
TAGATCATTCTGTATCGTGACGGGAGGAAGACAAATTTTTCCACGCAAGG
CGCCTGCCCAAAGGGTGCACCTGTTGCAACGCTTTCAAAGGCGTTGGTTT
GTCCGCAGGCTGGAACGTGCTAGTTTTGCAGGGGGGCAACAGTTGGTAGT
ATGGTTTGTGCGGTATCGATAGAAGCCCTTGCGTGCCTGAAGTCGAGTTA
ATGATTGCACCTATCGAAAACGGTCGTGCCAGCGTGTGCATTGCACCTGA
GCGCGAGGCAGAAGTGCGTTTATCGACAAAAACGGTTGCATGCACTGCAT
CGTGCGAAACACGCAGACGGATCAGGGCCAGTCACAGCAATTGCTTCGTG
GACGGCATGGTTGAAATTTATTTTCGCCGCGGTCCCATGAAATAGTACAT
TCATTCCGAATTTACTCTATTTATTGTTGGGAAGCGGTAGCAAACGTTAT
TTGACGATGCTAACCTCCAGTAGCAAGCGTTAGTCGGCGGTGCTTGAAAA
TCGAGCAAGTCCGAGCAGTATGACCATCATGGCGGCAGCGGGTGCACAGG
AATTGTGTTGAGCACGTCTTGGTATTTGTTTCGTCAGCCTCATGAAACCA
ACGTTCAGCACCGCGATGGGTTCGACACGGATCAAAGACAAAGGGGGGGG
GGAGGGGGGAGTGCCCGCAGATGATGGTTCCAAGCCGTGATCCGCGAGCA
GCCTAAAAGGTTGGGTTCAGCCAACGTGGTTACTGCTGCTACTGTGAGTG
GTCCTCCTGAACAATATTCGGCACCACGGAATGGCATCGTAGAAGTGGAT
ATGGTATCCTCTAACCTGTGGGAACTATCTGGGACAACCTCCCTCCCCCC
CAGGTGGCAACGAGGCGAACCCTTCAGCTCGCTGGGGCGTTCTCGGGCTT
CGTTACGAGCTACCTCCTCGACTTGGTTAGGGGAAAAGTGAAGGAGAACG
AGGTGAGAACTCAGCGAAACAAGAAGTTGCTTCTATAGACTTTGCCCGAA
ATGATCGGTTCTCCTTCAGAACCAGTGCTCCGTAGAACTAGACCTGTTTT
TCGTAGTATGGTTTCAGCTCCCAACGCAAGTCCCCCATGTATTTGACCGC
CCGTCTCTCCCGTTTTTTTTGTTTGTTTTTGCGGCTGGTCGGCATAAAGA
GGGGGGTTCCGCGATTTATAATGCTCCCTGCTCCCTCTCGCTAGTCCTCT
TGTCGACCAAGTGGCGGGTATGTTTTCTGGACGGACTTATTCGGCTACAA
CCGTAAGAATACGGGTCTCGATATTTTTCGGCTCGAACTGTTTTTTTTCT
TCTTTTTTTCTGCCAACACCAACCGCGCCCGAATGGATTGAATGGATTCA
CCCTTCCTCCTTCCTTGTGTGTGCACTGCTGCAGACCAACGAGGACCACG
TTTTGGGTTGGCAAGTTGCGCGAGCAACACAAACCTGGCTGTGCTGGCAC
TGCTCGACAGGACCCCCCATGTATGAAACGGAAAATGCGTCCTCCGCCCT
GTACCGCCCCCGTTTGAAATCGATCGCTACTGCTGTGTAAACAACCTTGC
ACAGATTGCGCGGGCGATCCAGCTGCGCGAGATTATCACGTCGCTGGGCC
CCTTCTACATCAAGCTGGGGCAGGCGCTGTCGATCCGACCGGACATTCTG
TCCCCCGGCGCGATGGTGGAGCTGCAGAGACTTTGCGACAAGGTCCCGTC
GTTCGATAGCACCATCGCATTCTTGGTAAGTTCAGTATTGCTTCTAGATG
TTGTTTTTCGTTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTG
TTGTAGTTGTGGCTGTGGCTGGAGATGTTTTTTTTTGTGACTGTCCATGT
GTTTTTTTTTCTTGTGGACTGCCTCTTGAGGGTTTCTTATCCCTCTCCCT
ATCCTTAAAACCTCTGTACCCCCCACCAATACCAAAAATATTCTTCCTCG
CTAAGGCTTCTGTATTTTGTTCTTGTTGTGGTTGCTGTGACTGACAAACG
TGGAGGCTGGTACAATCGCGGTTTCCCGGATCCAGAGGCATCTGCTGAAC
GCGAGTTATTTGCATGCTCTCTGTCGCTTCCGTCATCTAACTCGTTTCAA
CGTTTATCGGTCGCTCCATTCTGTGTGGATTGCGTTCGATTATCGCGGAG
TTCCTCTCGTCGCTTAAGAGCATGTCACTTTGCAAGCTACACATCCATCC
CATCTCTTCGGTGCAGCGTTGATTGCAGCGACGATTTTAGCCGACGCCGC
TCGTCAAATCATCCCGAGCATTTCAACCGCCGCTACCGTCTTTTTCTTTG
TTTTTGCAGACGATGGAGTTGGAATACGGGAGGCCCGTGGAGGAAATATT
TGTGGATATCACGCCGGAACCTCTCGCGGCAGCCTCCCTCGGACAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig821:764..5709-

>mRNA_Ecto-sp13_S_contig821.19568.1 ID=mRNA_Ecto-sp13_S_contig821.19568.1|Name=mRNA_Ecto-sp13_S_contig821.19568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1059bp|location=Sequence derived from alignment at Ecto-sp13_S_contig821:764..5709- (Ectocarpus species13 EcNAP12_S_4_19m)
CTGCCGCCTACGTTCTGGTTGTTGATCTTACATATCAGCACATCCCGCCC
CACGGGAAACAGCGCAGCCATGAATAAGCCTGGCCATAGAAGTAAAGCTT
CCTATCTCCCATGCGACACTCAATCTGCAAGCCAGCCAGGCCGGCGGAGG
GCCAGGCGTCAGCTCACGAAGCTTGCGACGACGTCGTCATGTTTGCTGCT
GCTGGTGCTGCTTTGTCATCGCCAGCGCGAGCACCTGGTATGTGGCCTCG
TGGCTCCTTCCCACGGTGGCGTAGCCAGTAGCACCTTCAGCAGGAGCAGC
GGCGTGAGCGGGAGCTCTGTTTCTACCGTGGGAGGATCGCCGCGGTGGTA
TGGCAGGTGTCCCCGACCGAAACATGGGCTCGAGATGACGTTGACATCAC
CACCCCCTCGGACACGGCAGCAGCAAGAGACCGAGACGATCAATGGCGGA
ACACAGTCAGTGCGGGAGATGAGCGCACAGATGAGCCAGATGAGGAAAGA
TCTCGAAGAAAACGAGGAGGCCCAGGCGTACATGCAGGCGTTGCGGGGGG
CGGGGATCAGGGACTACGCCTCCGCCGAAGGAGAGATGCGTCTCCTGGAG
ATCGAGGACGGCGAGGCGGAGGGGGCGGGAGGAGAGACGGACAGGCTTCC
GCTGGTGTATGACCCGGAGGTCCTCAAGGATTACTTTGCTCGAAGACCTC
AGGTGGCAACGAGGCGAACCCTTCAGCTCGCTGGGGCGTTCTCGGGCTTC
GTTACGAGCTACCTCCTCGACTTGGTTAGGGGAAAAGTGAAGGAGAACGA
GATTGCGCGGGCGATCCAGCTGCGCGAGATTATCACGTCGCTGGGCCCCT
TCTACATCAAGCTGGGGCAGGCGCTGTCGATCCGACCGGACATTCTGTCC
CCCGGCGCGATGGTGGAGCTGCAGAGACTTTGCGACAAGGTCCCGTCGTT
CGATAGCACCATCGCATTCTTGACGATGGAGTTGGAATACGGGAGGCCCG
TGGAGGAAATATTTGTGGATATCACGCCGGAACCTCTCGCGGCAGCCTCC
CTCGGACAG
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