prot_Ecto-sp13_S_contig82053.19562.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig82053.19562.1
Unique Nameprot_Ecto-sp13_S_contig82053.19562.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
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BLAST of mRNA_Ecto-sp13_S_contig82053.19562.1 vs. uniprot
Match: D8LBG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBG0_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 2.660e-25
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0 
Query:    1 MPLAGSFVETLRASMAERGHVLT-SISAHCVFLIVPRCFGSRFTGMSIVDRALLRAWLVL 59
            MPLAGS +ETLRASMAER HV+T S+S HCVFLIVPRCFGSRFTGM IVDRA L AW+V+
Sbjct:    1 MPLAGSVLETLRASMAERAHVVTFSVSLHCVFLIVPRCFGSRFTGMWIVDRAFLGAWIVV 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig82053.19562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBG0_ECTSI2.660e-2580.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig82053contigEcto-sp13_S_contig82053:11..190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig82053.19562.1mRNA_Ecto-sp13_S_contig82053.19562.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig82053 11..190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig82053.19562.1 ID=prot_Ecto-sp13_S_contig82053.19562.1|Name=mRNA_Ecto-sp13_S_contig82053.19562.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
MPLAGSFVETLRASMAERGHVLTSISAHCVFLIVPRCFGSRFTGMSIVDR
ALLRAWLVL*
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