prot_Ecto-sp13_S_contig8205.19560.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8205.19560.1
Unique Nameprot_Ecto-sp13_S_contig8205.19560.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length487
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8205.19560.1 vs. uniprot
Match: A0A6H5KWT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT2_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 2.060e-155
Identity = 249/295 (84.41%), Postives = 256/295 (86.78%), Query Frame = 0 
Query:    1 MASAAFACCLLSCFASRLAPPSHHDNACARRSLRPTALHYACHEWSAPTRSKPLPTSPSWSSGSR-----SRKGVHACLANGSGGGSTRLGYGRRRRDSTRLMGLRKPRGPDSSRSTGEDPDPEXXXXXGGSMRERMMSYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPTSSPRRTRSSQAPAPERRLTSSQQPGAFFDGVENLKEAERPTGTDATFDADFFAFREKGSLASVKRRREVERXXXXXXRGAGGGEGSAFKVELATQLGLPASSTYDEEATR 290
            MASAAFACCLLSCFASRLAPPSHHDNACARRSLRPTALHYA HEWSAPT SKPLPTSP WSS          K VHACLANGSG GSTRLGYGRRRRDSTRLMGLRKPRGPD SRS+GE+PDPE     GGSMRERM+SYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPTSSPRRTRSSQAPAP RRLTSSQQPGAFFDGV +LKEAERPT TDATFDADFFAFREK  LASVKRR     XXXXXX      +GSA KVELATQLGLPASSTYDE+ T+
Sbjct:    1 MASAAFACCLLSCFASRLAPPSHHDNACARRSLRPTALHYARHEWSAPTLSKPLPTSPRWSSSXXXXXXXGSKIVHACLANGSGDGSTRLGYGRRRRDSTRLMGLRKPRGPDGSRSSGENPDPEEEDNEGGSMRERMVSYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPTSSPRRTRSSQAPAPARRLTSSQQPGAFFDGVADLKEAERPTETDATFDADFFAFREKDLLASVKRRXXXXXXXXXXXXXXXXXKGSAVKVELATQLGLPASSTYDEDWTQ 295
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BLAST of mRNA_Ecto-sp13_S_contig8205.19560.1 vs. uniprot
Match: D8LEY6_ECTSI (J domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY6_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 2.510e-98
Identity = 173/192 (90.10%), Postives = 177/192 (92.19%), Query Frame = 0 
Query:   98 MGLRKPRGPDSSRSTGEDPDPEXXXXXGGSMRERMMSYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPTSSPRRTRSSQAPAPERRLTSSQQPGAFFDGVENLKEAERPTGTDATFDADFFAFREKGSLASVKRRREVERXXXXXXRGAGGGEGSAFKVELATQLGLPASSTYDEEAT 289
            MGLRKPRGPD SRS+GEDPDPEXXXXXGGSMRERMMSYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQP+SS RRTRSSQAPAPERRLTSSQQP AFFDGV +LKEAERPTGTDA FDADFFAFREK SLASVKRRREVERXXXXXX      +GSA KVELATQLGLPASSTYDE  T
Sbjct:    1 MGLRKPRGPDGSRSSGEDPDPEXXXXXGGSMRERMMSYAMPASKRRPPEEDDIWSKHSVFEFKSLNDPDTNACGYKGLSGQPSSSRRRTRSSQAPAPERRLTSSQQPAAFFDGVGDLKEAERPTGTDAAFDADFFAFREKDSLASVKRRREVERXXXXXXXXXXXXDGSAVKVELATQLGLPASSTYDELRT 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8205.19560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWT2_9PHAE2.060e-15584.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEY6_ECTSI2.510e-9890.10J domain-containing protein n=1 Tax=Ectocarpus sil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..486
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.611

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8205contigEcto-sp13_S_contig8205:1031..4959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8205.19560.1mRNA_Ecto-sp13_S_contig8205.19560.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8205 356..5046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8205.19560.1 ID=prot_Ecto-sp13_S_contig8205.19560.1|Name=mRNA_Ecto-sp13_S_contig8205.19560.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=487bp
MASAAFACCLLSCFASRLAPPSHHDNACARRSLRPTALHYACHEWSAPTR
SKPLPTSPSWSSGSRSRKGVHACLANGSGGGSTRLGYGRRRRDSTRLMGL
RKPRGPDSSRSTGEDPDPEEEEDEGGSMRERMMSYAMPASKRRPPEEDDI
WSKHSVFEFKSLNDPDTNACGYKGLSGQPTSSPRRTRSSQAPAPERRLTS
SQQPGAFFDGVENLKEAERPTGTDATFDADFFAFREKGSLASVKRRREVE
RRRRSAARGAGGGEGSAFKVELATQLGLPASSTYDEEATRATTGGLRKGH
FKPNQARIFCFAPPTGWRSSDATRILLGTTSSESSSSSESSRSSRVAGTC
STPSVRPVPQLPQRRRKVVPVPRRAGRGLERARSEWIGSGRRQRRQRRQR
PGAAEGRSWTRIGKLWTLETPALVDFLSLGGCVYVCSALDVLKRAAVCDV
GAKSMPGSHDFRLRHVELDVFVKLKTSFFSLVRVAT*
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