prot_Ecto-sp13_S_contig8203.19558.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8203.19558.1
Unique Nameprot_Ecto-sp13_S_contig8203.19558.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length232
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8203.19558.1 vs. uniprot
Match: D7FGQ7_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ7_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.230e-50
Identity = 119/211 (56.40%), Postives = 126/211 (59.72%), Query Frame = 0 
Query:    2 YTNGLKLALERGSIEGYGNLFERIGKEPKKVVQRLPYLPGFLWPDKAETIIEEVSRPRADICRCRRRLLPGWKVPEAPKEVVRDLPPRRGLRQNRRLLPPRQPKHAGQAASPPSPRPYETKKELQSIHPSSSVGASTTNGGRGSASDAMPSVVGGGAAAWGGPRGLGGSTAGTEQADGSGSGGDGPLGSDATQQGSNKKRRVADGSDVDSG 212
            YTNGLKLALERG I GYGNLFERIG EPKKV QRLPYLPGFLWPDKAETI EE  R R    R RRRLLPGW+VP APKEV RDLP   G         P   +  G       P     +K   ++ PS                             WGGPRG GGSTAGTEQAD SG GGDG LG DA QQG NK+R+VADGSD DSG
Sbjct:   91 YTNGLKLALERGYIAGYGNLFERIGNEPKKVAQRLPYLPGFLWPDKAETIFEENWRSR----RRRRRLLPGWRVPGAPKEV-RDLPSTEGNAPEPVASSPAATEARGTCDVTVEPEALRDEKGA-AVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGPRGSGGSTAGTEQADASGPGGDGALGGDAAQQGPNKERKVADGSDADSG 295
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8203.19558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGQ7_ECTSI1.230e-5056.40Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8203contigEcto-sp13_S_contig8203:4467..6339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8203.19558.1mRNA_Ecto-sp13_S_contig8203.19558.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8203 2992..6339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8203.19558.1 ID=prot_Ecto-sp13_S_contig8203.19558.1|Name=mRNA_Ecto-sp13_S_contig8203.19558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
RYTNGLKLALERGSIEGYGNLFERIGKEPKKVVQRLPYLPGFLWPDKAET
IIEEVSRPRADICRCRRRLLPGWKVPEAPKEVVRDLPPRRGLRQNRRLLP
PRQPKHAGQAASPPSPRPYETKKELQSIHPSSSVGASTTNGGRGSASDAM
PSVVGGGAAAWGGPRGLGGSTAGTEQADGSGSGGDGPLGSDATQQGSNKK
RRVADGSDVDSGEPEQQRWLRPRGPKVDEDC*
back to top