prot_Ecto-sp13_S_contig8203.19557.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8203.19557.1
Unique Nameprot_Ecto-sp13_S_contig8203.19557.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8203.19557.1 vs. uniprot
Match: D7FGQ6_ECTSI (Sel1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ6_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 6.170e-81
Identity = 194/250 (77.60%), Postives = 194/250 (77.60%), Query Frame = 0 
Query:    1 LQQQCRDREAGGRRPSVTSDQAGPLAPHPRRSSDPSASAIPDNGSDSKINARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------KQPYKYVPKRDGPLPTDTVGRPSTSSNSQAAEVPAAWGKTERNSQDFPHQGAADDAASPTGARTRGPASAPWTPPPPRDRKNSLLLKPTPQAIARVKAAVERRKKLQAAAASAATATDARNPDGLPPAAER 232
            LQQQCRDREAGGRRPSVT DQAGPLAPH RRSSDPSASAIP            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               KQPYKYVPKRDGPLPTDT GRPSTSSNSQAAE PAA GK  RNSQD P QGAADDAASPTGART GPASAPW PPPPRDRKNSLLLKPTPQAIARVKAAVERRKKLQAAAASAA ATDARNPDGLP AAER
Sbjct:  204 LQQQCRDREAGGRRPSVTGDQAGPLAPHLRRSSDPSASAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATRGNPRANSQNISPESAAASASRRSSSPSKQPYKYVPKRDGPLPTDTTGRPSTSSNSQAAEGPAAGGKIGRNSQDMPQQGAADDAASPTGARTGGPASAPWIPPPPRDRKNSLLLKPTPQAIARVKAAVERRKKLQAAAASAAPATDARNPDGLPTAAER 453
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8203.19557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGQ6_ECTSI6.170e-8177.60Sel1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8203contigEcto-sp13_S_contig8203:3..916 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8203.19557.1mRNA_Ecto-sp13_S_contig8203.19557.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8203 3..916 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8203.19557.1 ID=prot_Ecto-sp13_S_contig8203.19557.1|Name=mRNA_Ecto-sp13_S_contig8203.19557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
LQQQCRDREAGGRRPSVTSDQAGPLAPHPRRSSDPSASAIPDNGSDSKIN
ARRRSSGRRSSSDPLVTPPPPEGAPPPTATRGNISPESATTSASRRSSSS
SKQPYKYVPKRDGPLPTDTVGRPSTSSNSQAAEVPAAWGKTERNSQDFPH
QGAADDAASPTGARTRGPASAPWTPPPPRDRKNSLLLKPTPQAIARVKAA
VERRKKLQAAAASAATATDARNPDGLPPAAER*
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