prot_Ecto-sp13_S_contig12341.1955.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12341.1955.1
Unique Nameprot_Ecto-sp13_S_contig12341.1955.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length172
Homology
BLAST of mRNA_Ecto-sp13_S_contig12341.1955.1 vs. uniprot
Match: D7FH33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH33_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.840e-117
Identity = 168/172 (97.67%), Postives = 170/172 (98.84%), Query Frame = 0
Query:    1 MHSVWTRKTRTWGYEVIRGIDEDDPWRVIRAFRRPTGLAFVDLNNQVEIDYGGYAWTQWMHRHFGDTALHIALKWKRHRAVKAILSLRPNWTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEETMRNLMAAEQAARDKARLDFLEAQHAARTIGIDHEAAI 172
            MHS+WTRKTRTWGYEVIRGIDEDDPWRVIRAFRRPTGLAFVDLN QVEIDYGGYAWTQWMHRHFGDTALHIALKWKR+RAVKAILSLRPNWTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEE MRNLMAAEQAARDKARLDFLEAQHAARTIGIDHEAAI
Sbjct:    1 MHSLWTRKTRTWGYEVIRGIDEDDPWRVIRAFRRPTGLAFVDLNTQVEIDYGGYAWTQWMHRHFGDTALHIALKWKRYRAVKAILSLRPNWTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEEAMRNLMAAEQAARDKARLDFLEAQHAARTIGIDHEAAI 172          
BLAST of mRNA_Ecto-sp13_S_contig12341.1955.1 vs. uniprot
Match: A0A835Z280_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z280_9STRA)

HSP 1 Score: 129 bits (324), Expect = 8.170e-35
Identity = 75/173 (43.35%), Postives = 105/173 (60.69%), Query Frame = 0
Query:    2 HSVWTRKTR-TWGYEVIRGIDEDDPWRVIRAFRRPTGLAFVDLNNQVEID-YGGYAWTQWMHRHFGDTALHIALKWKRHRAVKAILSLRPNWTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEETMRNLMAAEQAARDKARLDFLEAQHAARTIGIDHEAAI 172
            H+  TR+ R  WG++ IR ID+DDP  V+RA++ P    F D+++ V+   YG YA+TQ M  H GDTALH+ALKW++ RA KA+L L   W I N  GVTAE ++++ + K M   K +QEREY   AM  E++ M  L+A EQ+ +     D L   +  RT G   EA +
Sbjct:    3 HNATTRRLRGCWGFDAIRAIDQDDPALVLRAYKLP----FADVDHVVQKHLYGDYAFTQRMDLHEGDTALHLALKWRKMRAAKALLHLNARWDIVNAQGVTAEAILMKEHLKPMLTLKAQQEREYATQAMACEDDLMHTLLAHEQSMQQAMSADKLRQLNELRTAGAAQEAML 171          
BLAST of mRNA_Ecto-sp13_S_contig12341.1955.1 vs. uniprot
Match: A0A7S3Y2N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2N4_HETAK)

HSP 1 Score: 95.5 bits (236), Expect = 8.760e-22
Identity = 60/145 (41.38%), Postives = 79/145 (54.48%), Query Frame = 0
Query:    9 TRTWGYEVIRGIDEDDPWRVIRAFRRPTGLAFVDLNNQVEIDYGGYAWTQWMHRHFGDTALHIALKWKRHRAVKAILSLRPNWTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEETMRNLMAAEQAARDKARLD 153
            T +WGYEVIRGIDEDD  RV  A R   G     +N QV  +YGGY WT  +H ++GDTA+H+A+K+ R R  + +L L P+ T+ N  G TA +L    Y K +         E   D M AEE   R  +      R++A LD
Sbjct:   10 TSSWGYEVIRGIDEDDHERVTEALRSWRGKK---INIQVGEEYGGYRWTARLHEYYGDTAVHLAIKFSRPRIFRKLLLLAPDLTLYNGQGQTAAELAESTYKKPIKALVRAAWEEETRDRMAAEEAYERRRL------REQAELD 145          
BLAST of mRNA_Ecto-sp13_S_contig12341.1955.1 vs. uniprot
Match: A0A7S2C3Y6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3Y6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.990e-9
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 0
Query:   53 GYAWTQWMHRHFGDTALHIALKWKRHRAVKAILSL---RPN-----------WTIPNEAGVTAEQLVLRLYGKSMARFKDEQEREYENDAMRAEEETMRNLMAAEQAARDKA 150
            GYAW+ W HR  GDT LH+A++WKR++A+K +  L   RP+           + + +  G TAE LV   +G+++A    +QE+    D + A EE  R      +AAR  A
Sbjct:    1 GYAWSAWSHRMAGDTVLHLAMRWKRYKALKGLYRLPAQRPDGMVGAGQPFFDYDVRDVDGQTAESLVTAEFGRTIANLWTKQEK----DDIEAAEEAARQAALEAEAARSLA 108          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12341.1955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FH33_ECTSI1.840e-11797.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z280_9STRA8.170e-3543.35Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3Y2N4_HETAK8.760e-2241.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2C3Y6_9STRA3.990e-935.71Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..149
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 41..149
e-value: 1.7E-5
score: 26.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 63..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12341contigEcto-sp13_S_contig12341:3..1276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12341.1955.1mRNA_Ecto-sp13_S_contig12341.1955.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12341 3..1276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12341.1955.1 ID=prot_Ecto-sp13_S_contig12341.1955.1|Name=mRNA_Ecto-sp13_S_contig12341.1955.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
MHSVWTRKTRTWGYEVIRGIDEDDPWRVIRAFRRPTGLAFVDLNNQVEID
YGGYAWTQWMHRHFGDTALHIALKWKRHRAVKAILSLRPNWTIPNEAGVT
AEQLVLRLYGKSMARFKDEQEREYENDAMRAEEETMRNLMAAEQAARDKA
RLDFLEAQHAARTIGIDHEAAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf