prot_Ecto-sp13_S_contig82.19553.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig82.19553.1
Unique Nameprot_Ecto-sp13_S_contig82.19553.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length640
Homology
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BLAST of mRNA_Ecto-sp13_S_contig82.19553.1 vs. uniprot
Match: D7FRR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR7_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 2.130e-91
Identity = 174/308 (56.49%), Postives = 188/308 (61.04%), Query Frame = 0 
Query:   28 PSNPAPYPSPPREVVNSRDGEADQAPGGGFREPSTISSSGSDKEDIDRDSDAARGSPLRGDAKWHPWRRVNTTRNKSSGASGDGDGKTGSRVSPSRGTVRHRPGYHDNRCPPPRRAKLDGENDPKCHISGDGQEEDDVGDALFTSSVCNQGGGEAFPEADGVADFDDAPSEMDCGGYSFDGGFDGIATPPAEDGAQEREDNVQDMRGGYVSPIADLGGGVEEAKGEGSAVDSGKFGGTREGTVDESLWCRQDGCPYSVDGLGGDGSSGDSMIAGAGASAAGVHRLKRGRTHKQGPFQDTQTDGSATLQ 335
            PS PA  PSPP +V N+ D EAD+APGGGFREPST S SGSD+EDID DSDAAR SPLRGDAKW PWRRV+  RNK                                                    SG+GQE+DDVGDALF+SSVCNQGGG AFPEADGVADFDDAPSEMDCG YSFDGGFDG+AT                                                   EGTVDE LWCRQ+GCPYSVDGLGGDGSSGDS+IAGAGA+AAGVHRLKRGRT++QGPFQDTQTDGSATLQ
Sbjct:   29 PSIPALDPSPPPDV-NTGDDEADEAPGGGFREPSTSSFSGSDEEDIDGDSDAARESPLRGDAKWRPWRRVDMARNK---------------------------------------------------YSGNGQEDDDVGDALFSSSVCNQGGGAAFPEADGVADFDDAPSEMDCGDYSFDGGFDGVATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTVDERLWCRQNGCPYSVDGLGGDGSSGDSVIAGAGANAAGVHRLKRGRTYEQGPFQDTQTDGSATLQ 284
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig82.19553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRR7_ECTSI2.130e-9156.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig82contigEcto-sp13_S_contig82:22282..25646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig82.19553.1mRNA_Ecto-sp13_S_contig82.19553.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig82 22282..25804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig82.19553.1 ID=prot_Ecto-sp13_S_contig82.19553.1|Name=mRNA_Ecto-sp13_S_contig82.19553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=640bp
MEDEEDEEEEEEEEEEEDDGEKEKQQDPSNPAPYPSPPREVVNSRDGEAD
QAPGGGFREPSTISSSGSDKEDIDRDSDAARGSPLRGDAKWHPWRRVNTT
RNKSSGASGDGDGKTGSRVSPSRGTVRHRPGYHDNRCPPPRRAKLDGEND
PKCHISGDGQEEDDVGDALFTSSVCNQGGGEAFPEADGVADFDDAPSEMD
CGGYSFDGGFDGIATPPAEDGAQEREDNVQDMRGGYVSPIADLGGGVEEA
KGEGSAVDSGKFGGTREGTVDESLWCRQDGCPYSVDGLGGDGSSGDSMIA
GAGASAAGVHRLKRGRTHKQGPFQDTQTDGSATLQAGCKEMDFGWSRFHD
GGGDVDTSPDGEGPADPQDSGRGTSVRRLRREMSHGGGAYDPGPVGDAEY
PCEGGVDGSDSGSGGSCYRVNGSDSGGYGIGTGRIETMSPGDRGVEGGGF
LREYRSRGRGEDTQSVATPRMACEVLLVGGGDGLKISGNMGRGSETEGRA
SVSSGSSASDGIASGRPRFGLARSEAKGSESAAGSSFVGFPRVSLEPQSM
MRLHGGGVDVTAANVRSPSKADAIRKMGSTVAVRRRNEFGRRTGLTWSVL
PGGMGGTRSGGKLCPTPDAVFDAIWEKYGRAWESFVLQK*
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