prot_Ecto-sp13_S_contig8196.19549.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8196.19549.1
Unique Nameprot_Ecto-sp13_S_contig8196.19549.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length371
Homology
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 475 bits (1222), Expect = 6.460e-149
Identity = 301/371 (81.13%), Postives = 307/371 (82.75%), Query Frame = 0
Query:    1 MPCPIAREIGELLNLSPGNATAAXXXXXXXXXXXXXXXXXXXXXXXXSRSSSGSRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQGPSVSVVLPGTVVTDKQLTMMLSSPVKPAGGVAAGDLGEGGGSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLPFTDGGPSNQHTKQSGAGSATGSAAAPRXXXXXXXXXXXXXXXXXXXXXXXASPGSSNAXXXXXXXXXXXGQPAPRPRSAFSSSAGAGANRLPVTGIGGXXXRHHSGGPRRDPIGRSYVVRREDVLNQFPHQYAPFLALPGGLGETIGEGLTSGRGYHGTVFRMSLRTRPGDISSFTCTIDAVERE 371
            MPCPIAREIGELLNLSPGNA AA         X              SRS  GSRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALAD+QGPSV VVLPGTVVTDKQLTMMLSSPVKPAGGVA GDLG GGGSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLP  DGGP +QHTKQSG            XXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXGQPAPRPRSAFSSSAGA ANRLPVTGIG XXX   SGGPRRDPIGRSYVVRREDVLNQFPHQYAPFLAL GG+ ETIGEGLTSGRGYHGTVF MSL+TRPG+IS   CTI A+ERE
Sbjct:  115 MPCPIAREIGELLNLSPGNAAAAAAAGATTDAXGSGGKVSGAGSSTKSRSPPGSRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADIQGPSVCVVLPGTVVTDKQLTMMLSSPVKPAGGVA-GDLGVGGGSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLPSADGGPPSQHTKQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXGQPAPRPRSAFSSSAGAAANRLPVTGIGXXXXXXXSGGPRRDPIGRSYVVRREDVLNQFPHQYAPFLALSGGIRETIGEGLTSGRGYHGTVFPMSLKTRPGEISGSKCTIHALERE 481          
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 1.540e-143
Identity = 301/371 (81.13%), Postives = 306/371 (82.48%), Query Frame = 0
Query:    1 MPCPIAREIGELLNLSPGNATAAXXXXXXXXXXXXXXXXXXXXXXXXSRSSSGSRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQGPSVSVVLPGTVVTDKQLTMMLSSPVKPAGGVAAGDLGEGGGSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLPFTDGGPSNQHTKQSGAGSATGSAAAPRXXXXXXXXXXXXXXXXXXXXXXXASPGSSNAXXXXXXXXXXXGQPAPRPRSAFSSSAGAGANRLPVTGIGGXXXRHHSGGPRRDPIGRSYVVRREDVLNQFPHQYAPFLALPGGLGETIGEGLTSGRGYHGTVFRMSLRTRPGDISSFTCTIDAVERE 371
            MPCPIAREIGELLNLSPG  TAA XXXXXX                 SRSS G+RWLHDVLEVAETMKAER+EIILDEKEYEEQSLLHPALAD+QGPSVSVVLPGTVVTDKQLTMMLSSPV P+GGVA GDLGEGGG MGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLP TDGGPSNQHTKQSGA           XXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXX Q APRPRSAF        NR  VTG   XXX    GGPRRDPIGRSYVVRREDVLNQFPHQYAPFLALPGGLGETIGEGLTSGRGYHGTVFRMSLRTRPGDIS+  CTIDAVERE
Sbjct: 2102 MPCPIAREIGELLNLSPG--TAAAXXXXXXDAAGSGGKVSGAGSRMKSRSSPGTRWLHDVLEVAETMKAERMEIILDEKEYEEQSLLHPALADIQGPSVSVVLPGTVVTDKQLTMMLSSPVNPSGGVA-GDLGEGGGGMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLPSTDGGPSNQHTKQSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXQSAPRPRSAFXXXXXXXXNRXXVTGXXXXXXXXXXGGPRRDPIGRSYVVRREDVLNQFPHQYAPFLALPGGLGETIGEGLTSGRGYHGTVFRMSLRTRPGDISASKCTIDAVERE 2465          
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: A0A7S2VVU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVU2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.360e-11
Identity = 49/129 (37.98%), Postives = 82/129 (63.57%), Query Frame = 0
Query:   54 SRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQG-PSVSVVLPGTVVTDKQLTMMLSSPVKPAGGVAAGDLGEGGGSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGAD 181
            +R + ++LEVAE  K  ++ I++D ++++E+SLLHP L  +Q  PS+ + L   +V   +L + LS+P     G     + + G + G PR G+++ + + +TDCLQVLS + L LFDP G++LF G+D
Sbjct: 2553 TRAILELLEVAEAAKVGKLRIMVDYRQHDEESLLHPGLRSLQSSPSILICLEDVIVGVDEL-VRLSAP----SGFYRSSVTKFG-TNGSPRFGSAICSAYQMTDCLQVLSGNQLHLFDPTGQFLF-GSD 2674          
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: A0A482S1U4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1U4_9ARCH)

HSP 1 Score: 67.0 bits (162), Expect = 3.000e-8
Identity = 36/121 (29.75%), Postives = 66/121 (54.55%), Query Frame = 0
Query:   57 LHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQGPSVSVVLPGTVVTDKQLTMMLSSPV-KPAGGVAAGDLGEGGGSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYL 176
            ++ +   A  + A+++E+I D+  Y ++SLLHP L +MQG ++ V L    +  +Q+T  ++    K  G + + +               ++ ++FA+TDCL +LS +  F+FDP G YL
Sbjct:  828 INSISSFASNVGAKKIELIFDDSTYPKESLLHPGLGEMQGCALMVFLDSVALNSEQITRFITPLADKNYGAIVSAET-----------QCKNLASVFAITDCLSILSGNDFFVFDPSGRYL 937          
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: A0A2R6W2I1_MARPO (RING-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W2I1_MARPO)

HSP 1 Score: 66.6 bits (161), Expect = 4.130e-8
Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   57 LHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQGPSVSVVLPGTVVTDKQLTMMLSSPVKPAGGVAAGDLGEGGGSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYL 176
            L D+LE+A+  KA +V I+ D++E+  QSLL P L   QGP+++VV  G V+T +++  +   P     G    D G G            + +++++TD   ++S   L+LFDP G+ L
Sbjct: 2870 LFDLLEIADCCKARKVHIVYDKREHPRQSLLQPNLGQFQGPALTVVFEGAVLTTEEVCNLQGYPPTKLRGQIC-DFGSG------------LLSVYSITDLPFIVSSGCLYLFDPSGQIL 2976          
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: W7U1E4_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1E4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.030e-7
Identity = 57/195 (29.23%), Postives = 83/195 (42.56%), Query Frame = 0
Query:   53 GSRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQGPSVSVVLPGTVVTDKQLTMMLS---------------SPVKPAGGVAAGDL----GEGG--------------------------------GSMGRPRMGNSVTALFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLPFTDGGPSNQH 196
            G + + D++E+A+ +    +E++LDE+E++++SLLHP LA+ QGP++ + L   V+    L  + S               SP    GG   G      G GG                                G  G P  G  + +LF LTD LQVLS D   LFDPCG +L S  +   L   D   +  H
Sbjct: 3333 GYQAIMDLVELADDVGCPELEMLLDEREHKKESLLHPRLAETQGPALIIHLKDVVLGFDDLIRLTSPSRLRNRPIIRPYPPSPKASLGGSYHGASSHLRGLGGRDSPCNTDQERQSQHQQSRRLEQKLQEEDRSSGGYGWPVAGLGLCSLFHLTDVLQVLSGDQFVLFDPCGSHLVSEVEVERLRHQDSQETEPH 3527          
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: A0A7R9V148_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V148_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.480e-6
Identity = 40/113 (35.40%), Postives = 64/113 (56.64%), Query Frame = 0
Query:   50 SSSGSRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQGPSVSVVLPGTVVTDKQLTMMLSSPVKPAGGVAAGDLGEGGGSMGRPRMGNSVTALFALTDCLQVLS 162
            S++  R L ++ E+A+ +   R+ + LD + +  QSLLH  LA  QGPS+ VVLPG  ++ ++L  +L  P       A+G L E  G    P + + +   FA+T+ LQV+S
Sbjct:   21 SAAVVRLLWELAELADALGCGRMHVALDHRTHAAQSLLHTGLAQCQGPSLCVVLPGAQLSPEELGGLLVPPPP-----ASGQLPEVRGRA-LPGLADGLLGCFAVTNVLQVVS 127          
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.570e-5
Identity = 41/102 (40.20%), Postives = 51/102 (50.00%), Query Frame = 0
Query:  259 APRPRSAFSSSAGAGA---NRLPVTGIGGXXXRHHSGGPRRDPIGRSYVVRREDVLNQFPHQYAPFLALPGGLGETIGEGLTSGRG-YHGTVFRMSLRTRPG 356
            +P P  A  SSA AGA    R P  G             + +   + Y + R DV  +FPHQ+APFLA+PG     I  GL S  G +HGT  R+SLRT  G
Sbjct: 3715 SPAPGDAPGSSAQAGAASAERPPQQG-------------QDNAKAKRYSISRNDVFERFPHQFAPFLAVPGA---NIEAGLRSPEGRFHGTALRLSLRTAVG 3800          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8196.19549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LJG4_ECTSI6.460e-14981.13RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K688_9PHAE1.540e-14381.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2VVU2_9STRA1.360e-1137.98Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A482S1U4_9ARCH3.000e-829.75Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A2R6W2I1_MARPO4.130e-833.33RING-type domain-containing protein n=2 Tax=Marcha... [more]
W7U1E4_9STRA3.030e-729.23Ubiquitin-associated/translation elongation factor... [more]
A0A7R9V148_9CHLO1.480e-635.40Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A835YL62_9STRA1.570e-540.20RING-type domain-containing protein n=1 Tax=Tribon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15600FAMILY NOT NAMEDcoord: 53..176
NoneNo IPR availablePANTHERPTHR15600:SF42coord: 53..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8196contigEcto-sp13_S_contig8196:624..3187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8196.19549.1mRNA_Ecto-sp13_S_contig8196.19549.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8196 624..3187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8196.19549.1 ID=prot_Ecto-sp13_S_contig8196.19549.1|Name=mRNA_Ecto-sp13_S_contig8196.19549.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=371bp
MPCPIAREIGELLNLSPGNATAAAAATATTDAAGSGGKVSGAGSSTTSRS
SSGSRWLHDVLEVAETMKAERVEIILDEKEYEEQSLLHPALADMQGPSVS
VVLPGTVVTDKQLTMMLSSPVKPAGGVAAGDLGEGGGSMGRPRMGNSVTA
LFALTDCLQVLSHDSLFLFDPCGEYLFSGADPPTLPFTDGGPSNQHTKQS
GAGSATGSAAAPRSRRASSSSSRGSSPSSSFFVKNNASPGSSNAAAAAAS
AAAAAGQPAPRPRSAFSSSAGAGANRLPVTGIGGGGGRHHSGGPRRDPIG
RSYVVRREDVLNQFPHQYAPFLALPGGLGETIGEGLTSGRGYHGTVFRMS
LRTRPGDISSFTCTIDAVERE
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