prot_Ecto-sp13_S_contig81920.19545.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig81920.19545.1
Unique Nameprot_Ecto-sp13_S_contig81920.19545.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A6H5JH84_9PHAE (Mre11_DNA_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH84_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 5.360e-24
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    1 MESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            MESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV
Sbjct:  217 MESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 267          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A7S1Z5E1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z5E1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.160e-14
Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    2 ESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            ESLVGTFRI+QPGSSVATSL +GEAV K++GLL+IRG  FRL+ +PLS V
Sbjct:  205 ESLVGTFRITQPGSSVATSLVQGEAVRKHIGLLDIRGCQFRLKPIPLSMV 254          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A7S2UFV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFV9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.590e-14
Identity = 35/51 (68.63%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 MESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            MES VGT+RI+QPGSSVATSL  GE+V K+VG+L++RGN FR++ +PLSQV
Sbjct:  329 MESAVGTYRITQPGSSVATSLSAGESVRKHVGILDVRGNQFRIKKLPLSQV 379          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A7S1ZWN5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWN5_TRICV)

HSP 1 Score: 71.6 bits (174), Expect = 1.890e-14
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 MESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            MES+VG FRI+QPGSSVATSL  GE+  K VG+L++RG  FRL+ VPLSQV
Sbjct:   57 MESVVGMFRITQPGSSVATSLTAGESERKRVGILDVRGQSFRLRPVPLSQV 107          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A7S4MXX5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXX5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.980e-14
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    2 ESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            ES VGTFRISQPGSSVATSL  GEA  K VG+L+IRG  FRL+ VPLSQV
Sbjct:  296 ESAVGTFRISQPGSSVATSLTAGEAEKKQVGILDIRGQSFRLRPVPLSQV 345          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A1E7FCA9_9STRA (DNA repair exonuclease (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCA9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 7.590e-14
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    2 ESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            ES+VGTFRISQPGSSVATSL EGE++ K +G+L+IR   FRL A+PL+QV
Sbjct:  297 ESVVGTFRISQPGSSVATSLVEGESMRKKIGILDIREGQFRLTAIPLTQV 346          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A7S0C895_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C895_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.890e-14
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    2 ESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            +SLVGTFRI QPGSSVATSL  GE+V K+VG+LEIRG +FR+  +PL +V
Sbjct:   82 DSLVGTFRICQPGSSVATSLTPGESVRKHVGILEIRGEEFRITPLPLVEV 131          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: B8C3H0_THAPS (Mre11_DNA_bind domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3H0_THAPS)

HSP 1 Score: 72.8 bits (177), Expect = 1.020e-13
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    2 ESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            ESLVGTFRISQPGSSVATSL +GE   K+VG+L+IRG  FRL+++PL  V
Sbjct:  251 ESLVGTFRISQPGSSVATSLTQGEGRQKHVGILDIRGQQFRLKSIPLGSV 300          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A7S2K0M4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0M4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.870e-13
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    2 ESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            ESL+GT+RISQPGSSVATSL  GE   K+VG+L+IR   FRL ++PL+QV
Sbjct:   83 ESLIGTYRISQPGSSVATSLSPGECERKSVGILDIREKQFRLNSIPLTQV 132          
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Match: A0A485K1T0_9STRA (Double-strand break repair protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K1T0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.610e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    2 ESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQV 51
            ES+ G F I+QPGSSVATSL EGEA PK +G+LE+ GN+FRLQ+VPL  V
Sbjct:  262 ESIKGNFYITQPGSSVATSLVEGEAKPKKIGVLEVLGNNFRLQSVPLKTV 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig81920.19545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH84_9PHAE5.360e-24100.00Mre11_DNA_bind domain-containing protein n=2 Tax=E... [more]
A0A7S1Z5E1_9STRA1.160e-1474.00Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2UFV9_9STRA1.590e-1468.63Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1ZWN5_TRICV1.890e-1468.63Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4MXX5_9STRA2.980e-1476.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FCA9_9STRA7.590e-1470.00DNA repair exonuclease (Fragment) n=1 Tax=Fragilar... [more]
A0A7S0C895_9STRA8.890e-1468.00Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
B8C3H0_THAPS1.020e-1370.00Mre11_DNA_bind domain-containing protein (Fragment... [more]
A0A7S2K0M4_9STRA1.870e-1366.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A485K1T0_9STRA3.610e-1368.00Double-strand break repair protein n=1 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029052Metallo-dependent phosphatase-likeGENE3D3.60.21.10coord: 1..51
e-value: 4.7E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR10139DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11coord: 5..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig81920contigEcto-sp13_S_contig81920:407..559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig81920.19545.1mRNA_Ecto-sp13_S_contig81920.19545.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig81920 398..559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig81920.19545.1 ID=prot_Ecto-sp13_S_contig81920.19545.1|Name=mRNA_Ecto-sp13_S_contig81920.19545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
MESLVGTFRISQPGSSVATSLCEGEAVPKNVGLLEIRGNDFRLQAVPLSQ
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like