prot_Ecto-sp13_S_contig8190.19541.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI) HSP 1 Score: 404 bits (1039), Expect = 2.110e-126 Identity = 226/261 (86.59%), Postives = 230/261 (88.12%), Query Frame = 0
Query: 334 FRPAWRGGARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQPKTAVVNPYASMQAATKTKAIVNPYGAAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
FRPAWRGGARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKT IIDEDGLFKMLRDSNP+G+QP G APASKPA A P QPK AVVNPYASMQAA K KA VNP+GAAVIAGGKGKAPAGK+P A XXXXXXXXXXX AAAV QNPGQMWVDKYKP SSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT
Sbjct: 229 FRPAWRGGARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTRIIDEDGLFKMLRDSNPKGQQPPGXXXXXXXXXXXAPASKPAVANPYQPKKAVVNPYASMQAAAKKKAAVNPFGAAVIAGGKGKAPAGKSP--AGTSXXXXXXXXXXXGARAAAAVRQNPGQMWVDKYKPTSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 487
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A2K3D450_CHLRE (Replication factor C subunit 1 n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D450_CHLRE) HSP 1 Score: 138 bits (348), Expect = 1.690e-30 Identity = 101/253 (39.92%), Postives = 122/253 (48.22%), Query Frame = 0
Query: 342 ARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQPKTAVVNPYASMQAATKTKAIVNPYGAAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
A PPN+G KE P G CL GK FV+SGVLDSLGRE A D IK++GG+VTGAVS +T FLV+G GR SKY++A T +IDEDGLF ++R S P P+ AAAP PA+A GA AG PAG AAA Q+WVDKYKP +S+ ++G+ V LK WL NWE HL+G APT
Sbjct: 371 ASAPPPNQGNKEAPRGHPDCLTGKTFVISGVLDSLGREEATDYIKRHGGRVTGAVSGKTSFLVVGH--HTGR-----SKYRKAREHGTKVIDEDGLFSLIRASEPF----------IPAENAAAP---PASAPXXXXXXXXXXXXXXXXXXXXXXXAAQRPGAGAAAGPSSARPAG-------------------VTRQPAAAGDAGQYQLWVDKYKPRNSAELVGNNTLVDNLKSWLMNWEQVHLRGGAAPT 584
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A8J4D1N3_9CHLO (Replication factor C subunit 1 n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D1N3_9CHLO) HSP 1 Score: 131 bits (330), Expect = 2.280e-28 Identity = 101/252 (40.08%), Postives = 133/252 (52.78%), Query Frame = 0
Query: 346 PPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQ---PKTAVVNPYASMQAATKTKAIVNPYGAAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
PPN +KEVP G CL G+ FV++GVLDSL R AEDLIK++GGKVT VS +T FL+ G + GR SKY+ A KT +IDEDGLF +LR S P QP G P++A+ + PA+ S A P S++ K + V PY A V + + P TGA++V + Q+WVDKYKP +S ++G+ V LK WL+ WE HL+GA PT
Sbjct: 132 PPNYRRKEVPRGHPDCLTGRTFVITGVLDSLMRPDAEDLIKRHGGKVTQNVSGKTSFLLAGH--NCGR-----SKYRMAKQHKTKVIDEDGLFALLRASAPFA-QPEG-----PTTASTPGTAGPASIPTSNFFGSTVAAAGPGCSVR---KPEGPVAPYNAGV----RSQLP-----------------------ITGASSVGGSLNQLWVDKYKPANSFELVGNNTLVANLKQWLECWEQVHLRGAAVPT 340
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: D8UHI8_VOLCA (Replication factor C subunit 1 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UHI8_VOLCA) HSP 1 Score: 131 bits (330), Expect = 2.590e-28 Identity = 97/251 (38.65%), Postives = 126/251 (50.20%), Query Frame = 0
Query: 346 PPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQPKTAVVNPYASMQAATKTKAIVNPYG--AAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
PPN KKEVP G CL G+ FV++G+LDSL R AEDLIK++GGKVT +VS +T F+V+G G KY+ A KT +IDEDGLF +L+ +SA+ APA +PAAA + AA + + +G AA AG P G P A A Q+WVDKYKP +SS ++G+ V LK WL++WE HL+GA APT
Sbjct: 203 PPNYRKKEVPRGHPDCLTGRTFVITGILDSLMRPEAEDLIKRHGGKVTKSVSGKTAFVVVGHNCGRG-------KYRDAKQHKTKLIDEDGLFALLK-----------------ASASFAPAERPAAA--------------AAAAAIPSSICTSNFGPTAAARAG-----PGGAGPSAVRKPTGPYTTPQPSQPP--AXXXXXGLYQLWVDKYKPRNSSELVGNNTLVANLKQWLESWEQVHLRGAAAPT 408
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A8J4GSG1_9CHLO (BRCT domain-containing protein n=5 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GSG1_9CHLO) HSP 1 Score: 131 bits (330), Expect = 2.950e-28 Identity = 101/252 (40.08%), Postives = 133/252 (52.78%), Query Frame = 0
Query: 346 PPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQ---PKTAVVNPYASMQAATKTKAIVNPYGAAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
PPN +KEVP G CL G+ FV++GVLDSL R AEDLIK++GGKVT VS +T FL+ G + GR SKY+ A KT +IDEDGLF +LR S P QP G P++A+ + PA+ S A P S++ K + V PY A V + + P TGA++V + Q+WVDKYKP +S ++G+ V LK WL+ WE HL+GA PT
Sbjct: 345 PPNYRRKEVPRGHPDCLTGRTFVITGVLDSLMRPDAEDLIKRHGGKVTQNVSGKTSFLLAGH--NCGR-----SKYRMAKQHKTKVIDEDGLFALLRASAPFA-QPEG-----PTTASTPGTAGPASIPTSNFFGSTVAAAGPGCSVR---KPEGPVAPYNAGV----RSQLP-----------------------ITGASSVGGSLNQLWVDKYKPANSFELVGNNTLVANLKQWLECWEQVHLRGAAVPT 553
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A835T5C5_CHLIN (Replication factor C subunit 1 n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T5C5_CHLIN) HSP 1 Score: 130 bits (326), Expect = 9.520e-28 Identity = 102/253 (40.32%), Postives = 125/253 (49.41%), Query Frame = 0
Query: 342 ARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQPKTAVVNPYASMQAATKTKAIVNPYGAAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
A + PPN+G KE P G CL GK FV+SGVLDSLGRE A D IK++GG+ T AVS +T FL+ G GR SKY++A T +IDEDGLF ++R S P P AAAA PAA P A AA A G G + A A G A AAA Q+ Q+WVDKYKP +S ++G+ V LK WL +WE +L+GA APT
Sbjct: 372 ATVPPPNQGNKEAPRGHPDCLTGKTFVISGVLDSLGREEATDYIKRHGGRTTQAVSGKTTFLLAGHHC--GR-----SKYRKAREHSTKVIDEDGLFALIRASEPF----------IPGGAAAAAPPAPAAXXXXAP--ASQXXXXXXXXXXXXXXXXXXXAAAQRAAGAGPSSARPA-GVARQP---------------AAAGDQSQYQLWVDKYKPRNSVELVGNNTLVANLKSWLMSWEQVNLRGAAAPT 589
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A836BBT5_9CHLO (Replication factor C subunit 1 n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBT5_9CHLO) HSP 1 Score: 126 bits (316), Expect = 1.660e-26 Identity = 96/251 (38.25%), Postives = 123/251 (49.00%), Query Frame = 0
Query: 344 LAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQPKTAVVNPYASMQAATKTKAIVNPYGAAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
+ PPN+G KE P G CL GK FV+SGVLDSLGR+ A D IK++GG+ T AVS +T FL++G GR SK+++A + T +IDEDGL ++R S P P+G AAAP PA A P+ GA G PAG A AAA + Q+WVDKYKP +S ++G+ V L+ WL NWE HL+GA APT
Sbjct: 365 VPPPNQGNKEAPRGHPDCLTGKTFVISGVLDSLGRDEATDYIKRHGGRTTQAVSGKTTFLLVGHHC--GR-----SKFRKARELGTKVIDEDGLIALIRASEPN--IPAG---------AAAP---PATAAPASQXXXXXXXXXXXXXXXXXXXXXXXAGA----GPSSARPAGVA-------------------RAPAAAGDASQYQLWVDKYKPRNSVELVGNNTLVDNLRAWLLNWEQVHLRGAAAPT 571
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A8J4ARP4_9CHLO (Replication factor C subunit 1 n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4ARP4_9CHLO) HSP 1 Score: 124 bits (310), Expect = 8.920e-26 Identity = 95/250 (38.00%), Postives = 123/250 (49.20%), Query Frame = 0
Query: 346 PPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAAKPSQPKTAVVNPYASMQAATKTKAIVNPYGAAVIAGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNP-GQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
PPN KKE P G CL G+ FV++GVLDSL R AEDLIK++GGKVT VS +T FL++G + GR SKY+ A KT ++DEDGLF +LR S P A P +P + P A T A N +G+ A G G G+ PG TGA++ Q+WVDKYKP +S ++G+ V LK W++ WE H +GA APT
Sbjct: 316 PPNYRKKEAPRGHPDCLTGRTFVITGVLDSLMRPDAEDLIKRHGGKVTQNVSGKTSFLLVGH--NCGR-----SKYRMAKHHKTKVLDEDGLFALLRASAPF-------------------------APPERP---MATPTPGTAAPTSIPAS-NFFGSTAAAAGAGTG--GRKPG--DPVALNDAGVRSQPPITGASSGGGGSLNQLWVDKYKPANSFELVGNNTLVANLKQWIECWEQVHQRGAAAPT 525
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A150GSV0_GONPE (Replication factor C subunit 1 n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GSV0_GONPE) HSP 1 Score: 122 bits (306), Expect = 2.910e-25 Identity = 98/257 (38.13%), Postives = 131/257 (50.97%), Query Frame = 0
Query: 346 PPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPEGKQPSGGGSQDPSSAAAAPASKPAAA-KPSQPKTAVVNPYASMQAATKTKAIVNPYGAAVI-------AGGKGKAPAGKAPGAAXXXXXXXXXXXXXXXXTGAAAVCQNPGQMWVDKYKPNSSSGVIGHAGQVKKLKVWLQNWEGWHLKGAKAPT 594
PPN G K+VP G CL G+ FV+SGVLDSL R A+ LI+++GGKVT +VS RT FL++G + GR SKY+ A T IIDEDGLF ++R S P + D AAAPAS + SQP + A+ +A + +G+ +G + P GAA G + N Q+WVDKYKP +S ++G+ V LK WL++WEG HL+GA PT
Sbjct: 360 PPNYGNKDVPRGHPDCLTGRTFVMSGVLDSLMRSDADALIRRHGGKVTQSVSGRTAFLLVGH--NCGR-----SKYRGAKQHGTKIIDEDGLFALIRASEPFAPK-------DQPPPAAAPASXXXXXXQXSQPSS-----QAASRAGPAAISATGFFGSGAXXXXXXXPSGSRAAPPPASLGGAA-----------------GGSGGQLN--QLWVDKYKPKNSVELVGNNTLVANLKQWLESWEGVHLRGAAPPT 578
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Match: A0A196S782_BLAHN (Replication factor C subunit 1 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S782_BLAHN) HSP 1 Score: 114 bits (285), Expect = 8.460e-23 Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 0
Query: 332 GGFRPAWRGGARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTTIIDEDGLFKMLRDSNPE 447
G +RP W G R PP G K +PVGK+ CL+G FV++G+ +SL R+ +LI +YGG + AVS +T +LV G ++DGRP EGSKY+ A K II ED L +M+R SNPE
Sbjct: 104 GAYRPKWLGAER-DPPKHGSKPIPVGKDGCLSGIIFVLTGLNESLNRDETIELITRYGGIIRSAVSGKTQYLVAGFEMEDGRPITEGSKYRAAKEKKVPIISEDDLLQMIRRSNPE 218 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8190.19541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig8190.19541.1 ID=prot_Ecto-sp13_S_contig8190.19541.1|Name=mRNA_Ecto-sp13_S_contig8190.19541.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=594bpback to top |