mRNA_Ecto-sp13_S_contig1234.1954.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Match: D7G8D4_ECTSI (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D4_ECTSI) HSP 1 Score: 1587 bits (4110), Expect = 0.000e+0 Identity = 1202/1664 (72.24%), Postives = 1241/1664 (74.58%), Query Frame = 1
Query: 1 QHLREAGLTTPNLWFGVYDFNDEAKTGDNWRLLREEEQGGEPWRPLNDNSEVAIPVTAPGSVPLPSQRTGGRTGETSEGPSATMTTTMAFSLXTSATEAEAAVQAARHAAGVVARAPSSDTASDAAVAGXXXXXXXXXXXXXXXXXXXXXKAGQETSRAAPPRGVSTVAGESASGGGAASVGKIGWNPSRAATATAAAARVGNAGASERDTTGSXXXXXXXXXRVTATXXXXXXXXXXXXXTAGKPXXXXXXXXXXXXXXXXXXVEAELEAGGGRVGWSSSRSGAAGRGGDPTETLPVEGRPRAPLRPTSLAGEGGEKQLSAQQQQXXPEVQQQEPRQKIGWDPTLASKSQXXXXXXXXXXXXXXXXXX-----STASSTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHVRXXXXXXXXASATPGVATDPAAEPRVGWNASRVGNPAVHAPPAVNDNTAAPRTAPEPATSVAAADKPXXXXXXXXXXXXXXXXXXPVMNCRAAGANEAEAASAVAGRGAARRXXXXXXXXXVXNGDGG-------------GSVRRAEVPLHLRAVLLYASTQRGIDLRKWFDLGGGGDGETQDEGQAGEKVAALLTRVQFELVLAGLAEGLKAGLPEEERHEIDTAIAPRVIEAAVAAASATSGRSGARSSSSEDNNGCSVIDVGRLLDLCGIPPTTSSSPEAACLETRPPRDSDLQESVGQDVAGDTVKKEGLGAPGGHVCDNRGGEAAAKARVVAEAKAEAEADETALRRVVHQADLYGRVLASLGLKQPVVGSSQGAALADWEASLRVSTVPLEAFRESLAEVGLHLSRARAIALATRAFGPLRPFGGGAIGDDGAGRPRAGRRPNNNAGGGSARLGSSLSXXXXGSRKGTKNGQPRSVDRLSRRGGSRASLQRNSPQRXXXXXXXXXXXXXXXXXXPQEARGRTAARGDGGGVERAPSFPSRRNGQAHPVLSPTTRWRSTPPAPSRTQSSPPQRNSSREEPEIPAWSLRRYLLRLRCESKSRQAXXXXXXXXXXXXPTGQEEGCQDNEGSEEXXXXXXXXXXXXXXXXXATGEGGVAEGDEDDAVALSVFAAWGKRIRGERAERERERKREFQNALAGRPHSLTLEHLLECVHRFEIMPPEVMSRELRAMGQAFSGSVEGTRRAREILRRWSQASPASRNACSTDDPEQQVWEDVQTLSGAQRRARACAIVAKQREEELVESEDTSASVSRGLFLAYIRNSHGGKAGGAGVSLQRWLEDRQAAMEKARELEAGRERAQALSKADTEGRKARQALVSELKEELMRLVGSTKKTQKVDKAPGMEASEPTAITKNVLRSSREGLDMHRRLKRLESLAAEEHRTRKLEAGCSGGRQEGGRLKPTTSSSPSPSSLLLSKRAFNAEMGDVLFSLTADGSAAARARELAGVPLMAADLRKRWANEGRGGGAEADGVDASHAEMSSPPAGKEIGVPFAVELFGLEEALLLGRGHKDAEEKRKRALQQYRIWSKEKSKEARXXXXXXXXXXXXXXDRNRRRKADGLKAYRRWLRLASKEAYFSPQNNKVVPRVRASGALSSRSCTRRTLSCSGSGSNPVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RHWNPSTEGAGDFYVAAEAGFPDFL 4932
+HLREAGL TPNLWFGVYDFNDEAKTGDNWRLL EEEQGGEPWRPLNDNSEVAIP TAPGSVPLPS+RTGGRTGETSEGPSAT TTTMAFSL TSATEAEAAVQA HAAG VARAP XXXXXXXXXXXXXXXXXXXXX RGVST+AG SAS GGA SVGKIGWNPSRAATATAAAARVGN GASERD XXXXXXXXX VTAT XXX TAGKP XXXXXXXXXXXXXXXX VEAE EAGGG+VGWSSSRSGAAG GGDPTETLPVEGR +A LRPTS+AGE GEKQ SAQQQQXX PR+KIGWDPT ASK XXXXXXXXXXXXXXXXXX ST S +A XXX PH R +SATPGVATDPAA+PRVGWNASRVGN AV AP A D+TA P TAPEPATS AA KP XXXXXXXXXXXXXXXXX +MNCRA+GA EAE XXXXXXXXX X G VRRAEVPLHLRAVLLYASTQRGIDLRKWFDLGGGGDGE +DEGQAGEK AALLTRVQFELVLAGLAEGLK ESVGQDV D V+K G GAPGG V DNRGG AAAKARVVA DETALRR+V QADL+ RVLASLGLKQPVVGSSQG+ LAD EASLRVSTVPLEAFR+ LAEVGLHLSR RAIALATRA+GPL F AIGDDG GRPRAGRRPNNNAGGGSARLGSSLS GSR GTK+GQPRSVDRLSRRGGSRASLQRNSPQR XXXXXXXXXXXXXXX ARGRTAARG+GGG +RAPS SRRNGQAHPVLSPTTRW STPPAP RTQSSPPQRNS EPEIPAW LRRYL+RLRCESKSRQA XXXXXXXXXX PTGQEEGC+D+EGSE XXXXXXXXXXXXXXXXX DDA ALSVFAAWGKRIR ERAERERERKREFQ+ALAGRPHSLTLE LLECVHRFEIMPPEVMSRELRAMG+AFS SVEGTRRAREI+RRWSQASPASRNAC TD PEQ+VWEDVQTLSGAQRRARAC IVAKQREE ALVSELKEELMRLVGSTKKTQKVDKAPGME VLRSSREGLD+HRRLKRLESLAAEEHR RKL+ G SGGR +GGR KP TSSSPSP SLLLSKRAFNAEMGDVLFSLTADGSAAARARELAGVPL+AADLRK+WA EGRGGGAEADGVDASH EMSSP AGKEIGVPFAVELFGLEEALLLGRGHKDAEEKR+RALQQYRIWSKEKSKEA XXXXXXXXXXXXXX RRKA+GLKAYRRWLRLASKEAYFSPQNNKVVPRVR+SGALSSRSCTRRTLSCSGSGSN VTT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RHWNPSTEGAGD Y+AAEAGFPDFL
Sbjct: 141 EHLREAGLMTPNLWFGVYDFNDEAKTGDNWRLLAEEEQGGEPWRPLNDNSEVAIPATAPGSVPLPSKRTGGRTGETSEGPSATTTTTMAFSLATSATEAEAAVQAGHHAAGAVARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVSTLAGGSASEGGAGSVGKIGWNPSRAATATAAAARVGNVGASERDXXXXXXXXXXXXXXVTATAXXXVAT------TAGKPAXXXXXXXXXXXXXXXXQVEAEFEAGGGKVGWSSSRSGAAGSGGDPTETLPVEGRHQALLRPTSIAGERGEKQPSAQQQQXXXXXXXXXPRKKIGWDPTRASKPXXXXXXXXXXXXXXXXXXXXXXXKSTTRSARAAAAGAXXXAPAAPNAGGSVATPESTAKANGA-PHARALPPHSS-SSATPGVATDPAAKPRVGWNASRVGNQAVPAPLAAGDSTAEPPTAPEPATSGTAAHKPMXXXXXXXXXXXXXXXXXXMMNCRASGAKEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVRRAEVPLHLRAVLLYASTQRGIDLRKWFDLGGGGDGEMEDEGQAGEKAAALLTRVQFELVLAGLAEGLK-------------------------------------------------------------------------------------ESVGQDVVADIVEKAGPGAPGGSVYDNRGGGAAAKARVVAXXXXXXXXDETALRRIVQQADLFDRVLASLGLKQPVVGSSQGSTLADREASLRVSTVPLEAFRKGLAEVGLHLSRTRAIALATRAYGPLHRFSDSAIGDDGTGRPRAGRRPNNNAGGGSARLGSSLSSGSSGSRMGTKSGQPRSVDRLSRRGGSRASLQRNSPQRPQQXXXXXXXXXXXXXXXXXXARGRTAARGEGGGGKRAPSLSSRRNGQAHPVLSPTTRWGSTPPAPLRTQSSPPQRNSCHGEPEIPAWDLRRYLVRLRCESKSRQARXXXXXXXXXXNPTGQEEGCEDSEGSEXXXXXXXXXXXXXXXXXXXX-----XXXXXDDAAALSVFAAWGKRIRWERAERERERKREFQSALAGRPHSLTLEQLLECVHRFEIMPPEVMSRELRAMGKAFSESVEGTRRAREIVRRWSQASPASRNACGTDGPEQKVWEDVQTLSGAQRRARACVIVAKQREE---------------------------------------------------------------------------ALVSELKEELMRLVGSTKKTQKVDKAPGME----------VLRSSREGLDIHRRLKRLESLAAEEHRARKLDTGGSGGRPKGGRQKPATSSSPSPPSLLLSKRAFNAEMGDVLFSLTADGSAAARARELAGVPLIAADLRKKWAKEGRGGGAEADGVDASHTEMSSPLAGKEIGVPFAVELFGLEEALLLGRGHKDAEEKRERALQQYRIWSKEKSKEAXXXXXXXXXXXXXXXXXXXRRKAEGLKAYRRWLRLASKEAYFSPQNNKVVPRVRSSGALSSRSCTRRTLSCSGSGSNRVTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHWNPSTEGAGDVYMAAEAGFPDFL 1621
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Match: A0A6H5K9W1_9PHAE (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W1_9PHAE) HSP 1 Score: 1129 bits (2921), Expect = 0.000e+0 Identity = 829/1104 (75.09%), Postives = 848/1104 (76.81%), Query Frame = 1
Query: 1 QHLREAGLTTPNLWFGVYDFNDEAKTGDNWRLLREEEQGGEPWRPLNDNSEVAIPVTAPGSVPLPSQRTGGRTGETSEGPSATMTTTMAFSLXTSATEAEAAVQAARHAAGVVARAPSSDTASDAAVAGXXXXXXXXXXXXXXXXXXXXXKAGQETSRAAPPRGVSTVAGESASGGGAASVGKIGWNPSRAATATAAAARVGNAGASERDTTGSXXXXXXXXXRVTATXXXXXXXXXXXXXTAGKPXXXXXXXXXXXXXXXXXXVEAELEAGGGRVGWSSSRSGAAGRGGDPTETLPVEGRPRAPLRPTSLAGEGGEKQLSAQQQQXXPEVQQQEPRQKIGWDPTLASKSQXXXXXXXXXXXXXXXXXXSTASSTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHVRXXXXXXXXASATPGVATDPAAEPRVGWNASRVGNPAVHAPPAVNDNTAAPRTAPEPATSVAAADKPXXXXXXXXXXXXXXXXXXPVMNCRAAGANEAEAASAVAGRGAARRXXXXXXXXXVXNGDG----------GGSVRRAEVPLHLRAVLLYASTQRGIDLRKWFDLGGGGDGETQDEGQAGEKVAALLTRVQFELVLAGLAEGLKAGLPEEERHEIDTAIAPRVIEAAVAAASATSGRSGARSSSSEDNNGCSVIDVGRLLDLCGIPPTTSSSPEAACLETRPPRDSDLQESVGQDVAGDTVKKEGLGAPGGHVCDNRGGEAAAKARVVAEAKAEAEADETALRRVVHQADLYGRVLASLGLKQPVVGSSQGAALADWEASLRVSTVPLEAFRESLAEVGLHLSRARAIALATRAFGPLRPFGGGAIGDDGAGRPRAGRRPNNNAGGGSARLGSSLSXXXXGSRKGTKNGQPRSVDRLSRRGGSRASLQRNSPQRXXXXXXXXXXXXXXXXXXPQEARGRTAARGDGGGVERAPSFPSRRNGQAHPVLSPTTRWRSTPPAPSRTQSSPPQRNSSREEPEIPAWSLRRYLLRLRCESKSRQAXXXXXXXXXXXXPTGQEEGCQDNEGSEEXXXXXXXXXXXXXXXXXATGEGGVAEGDEDDAVALSVFAAWGKRIRGERAERERERKR 3282
+HLREAGLTTPNLWFGVYDFNDEAKTGDNWRLL + EQGGEPWRPLNDNSEV IPVTAPGSVPLPS+RTGGRTGETSEG X VQAA+HAAGVVARAPSSDTASDAAV XXXXXXXXXXXXXXXXXXXXX RGVST+AG +AS GGAASVGKIGW+PSRAATATAAAARVGNAGASERD XXXXXXXX XXXXXXXXXXX GKP XXXXX VEAE EAGGG+VGWSSSR GAAG GGDPTETL VEG PRA LRPTSLAGEGGEKQ SAQQQ EPRQKIGWDPT ASKSQXXXXXXXXXXXXXXXXXX TA STQA PHVR ASATPGVATDPA +PRVGWNASRVGNPAV AP AVN TAAP TAPEPATS AA DKP XXXXXXXXXXXXXXXXX VMNCRAAGA EAEAASA XXXXXXXXX X GG VRRAEVPLHLRAVLLYASTQRGIDLRKWFDLGGGGDGET+DEGQAGEKVA LLTRVQFELVLAGL EGLKAGL E+ERHEIDTAIAPRVIEAAVAAASAT GRSGARSSSSE NNGCSVIDVGRLLDLCGIP TTS SP AAC E PPRDSD QESVGQDVA DTV+K G GAP GH CD RGGEAAAKARVVAEA EADETALRRV HQADLYGRVLASLGLKQP VGSSQG ALADW+ASLRVS+VPLEAFR+ LAEVGLHLSR RAIALATRA GPL F GGAIGDDG GRPRAGRRPNNNAGGGSARLGSSLS GSRKGTKNG+PRSVDRLSRRGG RASLQRNSPQ XXXXXXXXXXXXXXXXXX +RAPS SRRNGQAHPVLSPTTRWRSTPPAPSR QSSPPQRNSSR EPEIPAW LRRYLLRLRCES SRQA PTGQEEGC+D+EG EE XXXXXXXXXXXXXXX A ALSVFAAWG RIR ERAERERERKR
Sbjct: 82 EHLREAGLTTPNLWFGVYDFNDEAKTGDNWRLLDKGEQGGEPWRPLNDNSEVVIPVTAPGSVPLPSKRTGGRTGETSEGXXXXXXXXXXXXXXXXXXXXXXXVQAAQHAAGVVARAPSSDTASDAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVSTLAGGNASEGGAASVGKIGWSPSRAATATAAAARVGNAGASERDN----XXXXXXXXXXXXXXXXXXXXXXXXATATGKPAAAXXXXXDAASLSPQQKVEAEFEAGGGKVGWSSSRGGAAGCGGDPTETLRVEGPPRALLRPTSLAGEGGEKQPSAQQQHQQXXXXXXEPRQKIGWDPTRASKSQXXXXXXXXXXXXXXXXXXXTARSTQAAGAGASTSAPAAPNAGGSVVTPDSTAEANGG-PHVRALPPPSSSASATPGVATDPATKPRVGWNASRVGNPAVPAPLAVNGTTAAPPTAPEPATSGAAVDKPTXXXXXXXXXXXXXXXXXXVMNCRAAGAKEAEAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGVRRAEVPLHLRAVLLYASTQRGIDLRKWFDLGGGGDGETEDEGQAGEKVATLLTRVQFELVLAGLGEGLKAGLSEDERHEIDTAIAPRVIEAAVAAASATPGRSGARSSSSEGNNGCSVIDVGRLLDLCGIPSTTSLSPAAACPEPPPPRDSDPQESVGQDVAADTVEKAGPGAPEGHDCDTRGGEAAAKARVVAEA----EADETALRRVAHQADLYGRVLASLGLKQPAVGSSQGTALADWKASLRVSSVPLEAFRKGLAEVGLHLSRTRAIALATRACGPLHRFSGGAIGDDGTGRPRAGRRPNNNAGGGSARLGSSLSSGSSGSRKGTKNGRPRSVDRLSRRGGGRASLQRNSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAPSLSSRRNGQAHPVLSPTTRWRSTPPAPSRMQSSPPQRNSSRGEPEIPAWGLRRYLLRLRCESMSRQARCDQRRRRFRCNPTGQEEGCEDSEGLEEERXXXXXXXXXXXXXXXXXXXXXXXX-XXXXAAALSVFAAWGMRIREERAERERERKR 1175
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Match: A0A6H5KC99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC99_9PHAE) HSP 1 Score: 636 bits (1641), Expect = 4.800e-210 Identity = 406/488 (83.20%), Postives = 422/488 (86.48%), Query Frame = 1
Query: 3469 QASPASRNACSTDDPEQQVWEDVQTLSGAQRRARACAIVAKQREEELVESEDTSASVSRGLFLAYIRNSHGGKAGGAGVSLQRWLEDRQAAMEKARELEAGRERAQALSKADTEGRKARQALVSELKEELMRLVGSTKKTQKVDKAPGMEASEPTAITKNVLRSSREGLDMHRRLKRLESLAAEEHRTRKLEAGCSGGRQEGGRLKPTTSSSPSPSSLLLSKRAFNAEMGDVLFSLTADGSAAARARELAGVPLMAADLRKRWANEGRGGGAEADGVDASHAEMSSPPAGKEIGVPFAVELFGLEEALLLGRGHKDAEEKRKRALQQYRIWSKEKSKEARXXXXXXXXXXXXXXDRNRRRKADGLKAYRRWLRLASKEAYFSPQNNKVVPRVRASGALSSRSCTRRTLSCSGSGSNPVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHWNPSTEGAGDFYVAAEAGFPDFL 4932
QASPASRNAC TD+PEQQVWEDVQTLSGAQRRARACAIVAKQREEEL+ESED SASVSRGLFLAYIRNSHGGKA G GVSLQRWLEDRQAAMEK ALVSELKEELMRLVGSTKKTQKVDKAPGMEA + VLRSSREGLD+HRR+KRLESLAAEE+R RKLE+GCSGGRQ+GGR KP TSS P PSSLLLSKRAFNAEMG+VLFSLTADGSAAARARELAGVPLMAADLRK+WANEGRG GAEADGVDASHAE SSPPAGKEIGVPFAVELF LEEA LLGRGHKDAEEKR+RAL+QYRIWSKEKSKEA XXXXXXXXXXXXXX R RR+KA+GLKAYRRWLRLASKEAYFSPQNNKVVPRVRASGALSSRSCTRRT CSGSGSNPVTT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RHWNPSTEGAGDFY+AA+ GFPDFL
Sbjct: 18 QASPASRNACGTDEPEQQVWEDVQTLSGAQRRARACAIVAKQREEELMESEDKSASVSRGLFLAYIRNSHGGKARGGGVSLQRWLEDRQAAMEK--------------------------ALVSELKEELMRLVGSTKKTQKVDKAPGMEAMK-------VLRSSREGLDIHRRVKRLESLAAEEYRARKLESGCSGGRQKGGRQKPATSSLPLPSSLLLSKRAFNAEMGNVLFSLTADGSAAARARELAGVPLMAADLRKKWANEGRGVGAEADGVDASHAERSSPPAGKEIGVPFAVELFELEEASLLGRGHKDAEEKRERALEQYRIWSKEKSKEAXXXXXXXXXXXXXXXXRQRRKKAEGLKAYRRWLRLASKEAYFSPQNNKVVPRVRASGALSSRSCTRRTFGCSGSGSNPVTTATNTTALATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRRHWNPSTEGAGDFYLAADPGFPDFL 472
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Match: A0A7S2VWT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWT6_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 7.680e-7 Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 7 LREAGLTTP-NLWFGVYDFNDEAKTGDNWRLLREEEQGGEPWRPLNDNSEVAIPVTAPGSVPLPSQRTGGRTG 222
+ AGL NLWFGV+DFNDEAKTG NWRL+ +E++ W PL + E P GS+ LPSQ G G
Sbjct: 151 MGRAGLIPEHNLWFGVFDFNDEAKTGVNWRLMEDEKEWEPCWCPLGE-FENCCPNVKKGSIALPSQSGDGMGG 222
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Match: F0YC98_AURAN (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC98_AURAN) HSP 1 Score: 63.2 bits (152), Expect = 1.300e-6 Identity = 46/103 (44.66%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 4 HLREAGLTTP-NLWFGVYDFNDEAKTGDNWRLLREEEQGGEPWRPLNDNSEVAIPVTAPGS-VPLPSQRTGGRTGETSEGPSATMTTTMAFSLXTSATEAEAA 306
H+ A L NLW+G++DFNDEAKTG NW + + EQ EPW P N ++ +TAPGS LPSQ GG G +S G M+F TS AE A
Sbjct: 150 HMAAANLDPAINLWWGLFDFNDEAKTGKNWSYVPDAEQA-EPWFP-NGGADQVCAITAPGSRSSLPSQN-GGNFGNSSGG-------MMSFDFNTSLEAAEQA 242
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Match: A0A7S2K3P5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3P5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.550e-5 Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 13 EAGLTTP--NLWFGVYDFNDEAKTGDNWRLLREEEQGGEP-WRPLNDNSEVAIPVTAPGSV 186
EA P NLWF VYDFND+ +TG+NWR L E+ +P W PLND ++ P PG++
Sbjct: 146 EAASLNPERNLWFAVYDFNDDKQTGNNWRYLNASEE--DPLWTPLNDGAKTCCPRVKPGAI 204
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Match: A0A7S2SUK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUK9_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 7.580e-5 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 4 HLREAGLTTP-NLWFGVYDFNDEAKTGDNWRLLREEEQGGEPWRPLNDNSEVAIPVTAP 177
H+++AGL N W V+DFNDEAKTG NW +LR Q +PW P D +E A+P+ P
Sbjct: 148 HMQQAGLDPRVNKWSMVFDFNDEAKTGKNWSVLRRA-QYEDPWFPGGDVAEPAVPLLGP 205 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1234.1954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1234.1954.1 >prot_Ecto-sp13_S_contig1234.1954.1 ID=prot_Ecto-sp13_S_contig1234.1954.1|Name=mRNA_Ecto-sp13_S_contig1234.1954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1562bp MTTTMAFSLATSATEAEAAVQAARHAAGVVARAPSSDTASDAAVAGGGSGback to top mRNA from alignment at Ecto-sp13_S_contig1234:3022..17524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1234.1954.1 ID=mRNA_Ecto-sp13_S_contig1234.1954.1|Name=mRNA_Ecto-sp13_S_contig1234.1954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=14503bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1234:3022..17524- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1234:3022..17524- >mRNA_Ecto-sp13_S_contig1234.1954.1 ID=mRNA_Ecto-sp13_S_contig1234.1954.1|Name=mRNA_Ecto-sp13_S_contig1234.1954.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4686bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1234:3022..17524- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |